RNA–Protein interactions for RNA: ENST00000540491.1

SOD2-212, Transcript of superoxide dismutase 2, humanhuman

TSL 3

Gene SOD2, Length 454 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-212ENST00000540491 ATE1O95260 518 aa17.52■□□□□ 0.4
SOD2-212ENST00000540491 FEN1P39748 380 aaKnown RBP17.52■□□□□ 0.4
SOD2-212ENST00000540491 WNT3P56703 355 aa17.52■□□□□ 0.4
SOD2-212ENST00000540491 CKAP4Q07065 602 aaKnown RBP17.52■□□□□ 0.4
SOD2-212ENST00000540491 YRDCQ86U90 279 aaKnown RBP17.52■□□□□ 0.4
SOD2-212ENST00000540491 IFNEQ86WN2 208 aa17.52■□□□□ 0.4
SOD2-212ENST00000540491 PLCZ1Q86YW0 608 aa17.52■□□□□ 0.4
SOD2-212ENST00000540491 PLD6Q8N2A8 252 aaKnown RBP17.52■□□□□ 0.4
SOD2-212ENST00000540491 C9orf106Q8NAJ2 232 aa17.52■□□□□ 0.4
SOD2-212ENST00000540491 OR14L1PQ8NHC6 308 aa17.52■□□□□ 0.4
SOD2-212ENST00000540491 ZNF675Q8TD23 568 aa17.52■□□□□ 0.4
SOD2-212ENST00000540491 TM4SF18Q96CE8 201 aa17.52■□□□□ 0.4
SOD2-212ENST00000540491 KLHL29Q96CT2 875 aa17.52■□□□□ 0.4
SOD2-212ENST00000540491 NODALQ96S42 347 aa17.52■□□□□ 0.4
SOD2-212ENST00000540491 RBM24Q9BX46 236 aaKnown RBP17.52■□□□□ 0.4
SOD2-212ENST00000540491 MRPL46Q9H2W6 279 aaKnown RBP17.52■□□□□ 0.4
SOD2-212ENST00000540491 PLEKHF2Q9H8W4 249 aa17.52■□□□□ 0.4
SOD2-212ENST00000540491 NEUROD4Q9HD90 331 aa17.52■□□□□ 0.4
SOD2-212ENST00000540491 XPR1Q9UBH6 696 aa17.52■□□□□ 0.4
SOD2-212ENST00000540491 VPS29Q9UBQ0 182 aa17.52■□□□□ 0.4
SOD2-212ENST00000540491 NDRG3Q9UGV2 375 aa17.52■□□□□ 0.4
SOD2-212ENST00000540491 DTX4Q9Y2E6 619 aa17.52■□□□□ 0.4
SOD2-212ENST00000540491 RPH3AQ9Y2J0 694 aaPredicted RBP17.52■□□□□ 0.4
SOD2-212ENST00000540491 PLLPQ9Y342 182 aa17.52■□□□□ 0.4
SOD2-212ENST00000540491 H0Y3Z8 333 aa17.51■□□□□ 0.39
SOD2-212ENST00000540491 UGT2B11O75310 529 aa17.51■□□□□ 0.39
SOD2-212ENST00000540491 CRHP06850 196 aa17.51■□□□□ 0.39
SOD2-212ENST00000540491 RPS17P08708 135 aaKnown RBP17.51■□□□□ 0.39
SOD2-212ENST00000540491 DRD2P14416 443 aa17.51■□□□□ 0.39
SOD2-212ENST00000540491 SRD5A2P31213 254 aa17.51■□□□□ 0.39
SOD2-212ENST00000540491 PTGDSP41222 190 aa17.51■□□□□ 0.39
SOD2-212ENST00000540491 MRPS22P82650 360 aaKnown RBP17.51■□□□□ 0.39
SOD2-212ENST00000540491 GALNT1Q10472 559 aaPredicted RBP17.51■□□□□ 0.39
SOD2-212ENST00000540491 EFR3AQ14156 821 aa17.51■□□□□ 0.39
SOD2-212ENST00000540491 BCL2A1Q16548 175 aa17.51■□□□□ 0.39
SOD2-212ENST00000540491 DCST1Q5T197 706 aa17.51■□□□□ 0.39
SOD2-212ENST00000540491 C8orf74Q6P047 294 aa17.51■□□□□ 0.39
SOD2-212ENST00000540491 FAM111BQ6SJ93 734 aa17.51■□□□□ 0.39
SOD2-212ENST00000540491 BIVMQ86UB2 503 aa17.51■□□□□ 0.39
SOD2-212ENST00000540491 CNPY4Q8N129 248 aa17.51■□□□□ 0.39
SOD2-212ENST00000540491 OR52R1Q8NGF1 315 aa17.51■□□□□ 0.39
SOD2-212ENST00000540491 LINC01560Q8TB33 94 aa17.51■□□□□ 0.39
SOD2-212ENST00000540491 SLC35A4Q96G79 324 aa17.51■□□□□ 0.39
SOD2-212ENST00000540491 ZNF681Q96N22 645 aa17.51■□□□□ 0.39
SOD2-212ENST00000540491 COL21A1Q96P44 957 aa17.51■□□□□ 0.39
SOD2-212ENST00000540491 TUBA1CQ9BQE3 449 aa17.51■□□□□ 0.39
SOD2-212ENST00000540491 BEX4Q9NWD9 120 aaPredicted RBP17.51■□□□□ 0.39
SOD2-212ENST00000540491 TAS2R10Q9NYW0 307 aa17.51■□□□□ 0.39
SOD2-212ENST00000540491 TRPS1Q9UHF7 1281 aa17.51■□□□□ 0.39
SOD2-212ENST00000540491 ZNF180Q9UJW8 692 aa17.51■□□□□ 0.39
SOD2-212ENST00000540491 DLGAP4Q9Y2H0 992 aa17.51■□□□□ 0.39
SOD2-212ENST00000540491 GPR55Q9Y2T6 319 aaPredicted RBP17.51■□□□□ 0.39
SOD2-212ENST00000540491 CASKO14936 926 aa17.5■□□□□ 0.39
SOD2-212ENST00000540491 CBX7O95931 251 aa17.5■□□□□ 0.39
SOD2-212ENST00000540491 KRT6AP02538 564 aa17.5■□□□□ 0.39
SOD2-212ENST00000540491 KRT6BP04259 564 aa17.5■□□□□ 0.39
SOD2-212ENST00000540491 HOXB4P17483 251 aaPredicted RBP17.5■□□□□ 0.39
SOD2-212ENST00000540491 KRT20P35900 424 aa17.5■□□□□ 0.39
SOD2-212ENST00000540491 CPA2P48052 419 aa17.5■□□□□ 0.39
SOD2-212ENST00000540491 KRT6CP48668 564 aa17.5■□□□□ 0.39
SOD2-212ENST00000540491 EMDP50402 254 aa17.5■□□□□ 0.39
SOD2-212ENST00000540491 GFRA1P56159 465 aa17.5■□□□□ 0.39
SOD2-212ENST00000540491 HMGCS1Q01581 520 aa17.5■□□□□ 0.39
SOD2-212ENST00000540491 TRIM42Q8IWZ5 723 aa17.5■□□□□ 0.39
SOD2-212ENST00000540491 WDSUB1Q8N9V3 476 aa17.5■□□□□ 0.39
SOD2-212ENST00000540491 NSUN5Q96P11 429 aaKnown RBP17.5■□□□□ 0.39
SOD2-212ENST00000540491 BTBD9Q96Q07 612 aa17.5■□□□□ 0.39
SOD2-212ENST00000540491 STMN4Q9H169 189 aaPredicted RBP17.5■□□□□ 0.39
SOD2-212ENST00000540491 SERHLQ9NQF3 203 aa17.5■□□□□ 0.39
SOD2-212ENST00000540491 NINJ2Q9NZG7 142 aa17.5■□□□□ 0.39
SOD2-212ENST00000540491 MCM8Q9UJA3 840 aa17.5■□□□□ 0.39
SOD2-212ENST00000540491 UTS2RQ9UKP6 389 aa17.5■□□□□ 0.39
SOD2-212ENST00000540491 MAPRE3Q9UPY8 281 aa17.5■□□□□ 0.39
SOD2-212ENST00000540491 MAP1AP78559 2803 aaPredicted RBP17.49■□□□□ 0.39
SOD2-212ENST00000540491 NIPBLQ6KC79 2804 aaeCLIP17.49■□□□□ 0.39
SOD2-212ENST00000540491 PDYNP01213 254 aa17.49■□□□□ 0.39
SOD2-212ENST00000540491 HRGP04196 525 aa17.49■□□□□ 0.39
SOD2-212ENST00000540491 HOXC12P31275 282 aa17.49■□□□□ 0.39
SOD2-212ENST00000540491 GSTM5P46439 218 aa17.49■□□□□ 0.39
SOD2-212ENST00000540491 AGFG1P52594 562 aaKnown RBP17.49■□□□□ 0.39
SOD2-212ENST00000540491 HEPACAMQ14CZ8 416 aa17.49■□□□□ 0.39
SOD2-212ENST00000540491 EXOSC7Q15024 291 aaKnown RBP17.49■□□□□ 0.39
SOD2-212ENST00000540491 NNATQ16517 81 aa17.49■□□□□ 0.39
SOD2-212ENST00000540491 ERCC6LQ2NKX8 1250 aa17.49■□□□□ 0.39
SOD2-212ENST00000540491 TRMT12Q53H54 448 aaKnown RBP17.49■□□□□ 0.39
SOD2-212ENST00000540491 SGO1Q5FBB7 561 aa17.49■□□□□ 0.39
SOD2-212ENST00000540491 SHEQ5VZ18 495 aa17.49■□□□□ 0.39
SOD2-212ENST00000540491 OR2A2Q6IF42 318 aa17.49■□□□□ 0.39
SOD2-212ENST00000540491 LCA5Q86VQ0 697 aa17.49■□□□□ 0.39
SOD2-212ENST00000540491 ADCY4Q8NFM4 1077 aa17.49■□□□□ 0.39
SOD2-212ENST00000540491 ZNF483Q8TF39 744 aaPredicted RBP17.49■□□□□ 0.39
SOD2-212ENST00000540491 CNRIP1Q96F85 164 aaPredicted RBP17.49■□□□□ 0.39
SOD2-212ENST00000540491 GALNT9Q9HCQ5 603 aa17.49■□□□□ 0.39
SOD2-212ENST00000540491 GIMAP4Q9NUV9 329 aa17.49■□□□□ 0.39
SOD2-212ENST00000540491 PACSIN3Q9UKS6 424 aa17.49■□□□□ 0.39
SOD2-212ENST00000540491 EIF3LQ9Y262 564 aaKnown RBP17.49■□□□□ 0.39
SOD2-212ENST00000540491 WIF1Q9Y5W5 379 aa17.49■□□□□ 0.39
SOD2-212ENST00000540491 SH3D21A4FU49 640 aa17.48■□□□□ 0.39
SOD2-212ENST00000540491 FAM171A2A8MVW0 826 aa17.48■□□□□ 0.39
SOD2-212ENST00000540491 A8MXE2 369 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms