RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 CNOT11Q9UKZ1 510 aaKnown RBP12.32□□□□□ -0.44
CCDC130-202ENST00000540216 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.32□□□□□ -0.44
CCDC130-202ENST00000540216 SPENQ96T58 3664 aaKnown RBP12.31□□□□□ -0.44
CCDC130-202ENST00000540216 PINLYPA6NC86 204 aa12.31□□□□□ -0.44
CCDC130-202ENST00000540216 SLCO1B7G3V0H7 640 aa12.31□□□□□ -0.44
CCDC130-202ENST00000540216 G3V3Y1 287 aa12.31□□□□□ -0.44
CCDC130-202ENST00000540216 KLF11O14901 512 aa12.31□□□□□ -0.44
CCDC130-202ENST00000540216 HS6ST1O60243 411 aa12.31□□□□□ -0.44
CCDC130-202ENST00000540216 ABCB7O75027 752 aa12.31□□□□□ -0.44
CCDC130-202ENST00000540216 SNX4O95219 450 aa12.31□□□□□ -0.44
CCDC130-202ENST00000540216 PSMG1O95456 288 aa12.31□□□□□ -0.44
CCDC130-202ENST00000540216 ABCB1P08183 1280 aaPredicted RBP12.31□□□□□ -0.44
CCDC130-202ENST00000540216 CT45A8P0DMV1 189 aa12.31□□□□□ -0.44
CCDC130-202ENST00000540216 CT45A9P0DMV2 189 aa12.31□□□□□ -0.44
CCDC130-202ENST00000540216 GPC1P35052 558 aa12.31□□□□□ -0.44
CCDC130-202ENST00000540216 PIGAP37287 484 aa12.31□□□□□ -0.44
CCDC130-202ENST00000540216 RFC3P40938 356 aa12.31□□□□□ -0.44
CCDC130-202ENST00000540216 DNASE1L1P49184 302 aa12.31□□□□□ -0.44
CCDC130-202ENST00000540216 C21orf58P58505 322 aa12.31□□□□□ -0.44
CCDC130-202ENST00000540216 FOXO1Q12778 655 aa12.31□□□□□ -0.44
CCDC130-202ENST00000540216 ZNF155Q12901 538 aaPredicted RBP12.31□□□□□ -0.44
CCDC130-202ENST00000540216 HSPB3Q12988 150 aa12.31□□□□□ -0.44
CCDC130-202ENST00000540216 PTGR1Q14914 329 aa12.31□□□□□ -0.44
CCDC130-202ENST00000540216 MLC1Q15049 377 aa12.31□□□□□ -0.44
CCDC130-202ENST00000540216 NNATQ16517 81 aa12.31□□□□□ -0.44
CCDC130-202ENST00000540216 ZNF385BQ569K4 471 aa12.31□□□□□ -0.44
CCDC130-202ENST00000540216 CT45A2Q5DJT8 189 aa12.31□□□□□ -0.44
CCDC130-202ENST00000540216 PRAMEF20Q5VT98 475 aa12.31□□□□□ -0.44
CCDC130-202ENST00000540216 ANKRD26P1Q6NSI1 321 aa12.31□□□□□ -0.44
CCDC130-202ENST00000540216 TMEM64Q6YI46 380 aa12.31□□□□□ -0.44
CCDC130-202ENST00000540216 Q6ZPB1 254 aaPredicted RBP12.31□□□□□ -0.44
CCDC130-202ENST00000540216 NUP54Q7Z3B4 507 aa12.31□□□□□ -0.44
CCDC130-202ENST00000540216 FAM109AQ8N4B1 249 aa12.31□□□□□ -0.44
CCDC130-202ENST00000540216 OR5M3Q8NGP4 307 aa12.31□□□□□ -0.44
CCDC130-202ENST00000540216 DIO2Q92813 273 aa12.31□□□□□ -0.44
CCDC130-202ENST00000540216 ARL8AQ96BM9 186 aa12.31□□□□□ -0.44
CCDC130-202ENST00000540216 OMA1Q96E52 524 aa12.31□□□□□ -0.44
CCDC130-202ENST00000540216 ELP4Q96EB1 424 aa12.31□□□□□ -0.44
CCDC130-202ENST00000540216 ZNF597Q96LX8 424 aa12.31□□□□□ -0.44
CCDC130-202ENST00000540216 SH3GL2Q99962 352 aa12.31□□□□□ -0.44
CCDC130-202ENST00000540216 DOHHQ9BU89 302 aa12.31□□□□□ -0.44
CCDC130-202ENST00000540216 MANSC1Q9H8J5 431 aa12.31□□□□□ -0.44
CCDC130-202ENST00000540216 ZDHHC11Q9H8X9 412 aa12.31□□□□□ -0.44
CCDC130-202ENST00000540216 QPCTLQ9NXS2 382 aa12.31□□□□□ -0.44
CCDC130-202ENST00000540216 TUBA8Q9NY65 449 aaPredicted RBP12.31□□□□□ -0.44
CCDC130-202ENST00000540216 B4GALT7Q9UBV7 327 aa12.31□□□□□ -0.44
CCDC130-202ENST00000540216 ZNF835Q9Y2P0 537 aa12.31□□□□□ -0.44
CCDC130-202ENST00000540216 ASH1LQ9NR48 2969 aaKnown RBP12.31□□□□□ -0.44
CCDC130-202ENST00000540216 DOPEY1Q5JWR5 2465 aa12.31□□□□□ -0.44
CCDC130-202ENST00000540216 EXPH5Q8NEV8 1989 aa12.3□□□□□ -0.44
CCDC130-202ENST00000540216 FLNBO75369 2602 aaKnown RBP12.3□□□□□ -0.44
CCDC130-202ENST00000540216 DOPEY2Q9Y3R5 2298 aa12.3□□□□□ -0.44
CCDC130-202ENST00000540216 WIPF3A6NGB9 483 aa12.3□□□□□ -0.44
CCDC130-202ENST00000540216 OR6C70A6NIJ9 312 aa12.3□□□□□ -0.44
CCDC130-202ENST00000540216 TRPC5OSA6NMA1 111 aa12.3□□□□□ -0.44
CCDC130-202ENST00000540216 FAM166BA8MTA8 275 aa12.3□□□□□ -0.44
CCDC130-202ENST00000540216 HMGB1P1B2RPK0 211 aaPredicted RBP12.3□□□□□ -0.44
CCDC130-202ENST00000540216 UPK1AO00322 258 aa12.3□□□□□ -0.44
CCDC130-202ENST00000540216 LDLRP01130 860 aa12.3□□□□□ -0.44
CCDC130-202ENST00000540216 ABOP16442 354 aa12.3□□□□□ -0.44
CCDC130-202ENST00000540216 KRT20P35900 424 aa12.3□□□□□ -0.44
CCDC130-202ENST00000540216 CASP3P42574 277 aa12.3□□□□□ -0.44
CCDC130-202ENST00000540216 CA7P43166 264 aa12.3□□□□□ -0.44
CCDC130-202ENST00000540216 MANFP55145 182 aaKnown RBP12.3□□□□□ -0.44
CCDC130-202ENST00000540216 CORO7P57737 925 aa12.3□□□□□ -0.44
CCDC130-202ENST00000540216 MRPS22P82650 360 aaKnown RBP12.3□□□□□ -0.44
CCDC130-202ENST00000540216 SNTA1Q13424 505 aa12.3□□□□□ -0.44
CCDC130-202ENST00000540216 ZNHIT3Q15649 155 aaPredicted RBP12.3□□□□□ -0.44
CCDC130-202ENST00000540216 CYP27C1Q4G0S4 372 aa12.3□□□□□ -0.44
CCDC130-202ENST00000540216 CMPK2Q5EBM0 449 aa12.3□□□□□ -0.44
CCDC130-202ENST00000540216 CPTPQ5TA50 214 aa12.3□□□□□ -0.44
CCDC130-202ENST00000540216 OGFOD2Q6N063 350 aa12.3□□□□□ -0.44
CCDC130-202ENST00000540216 MTFR2Q6P444 385 aa12.3□□□□□ -0.44
CCDC130-202ENST00000540216 ARHGAP11AQ6P4F7 1023 aa12.3□□□□□ -0.44
CCDC130-202ENST00000540216 ZNF551Q7Z340 670 aaPredicted RBP12.3□□□□□ -0.44
CCDC130-202ENST00000540216 SPPL2CQ8IUH8 684 aa12.3□□□□□ -0.44
CCDC130-202ENST00000540216 PRR22Q8IZ63 422 aa12.3□□□□□ -0.44
CCDC130-202ENST00000540216 CEP70Q8NHQ1 597 aa12.3□□□□□ -0.44
CCDC130-202ENST00000540216 CIDECQ96AQ7 238 aaPredicted RBP12.3□□□□□ -0.44
CCDC130-202ENST00000540216 SLC35A4Q96G79 324 aa12.3□□□□□ -0.44
CCDC130-202ENST00000540216 RILPQ96NA2 401 aa12.3□□□□□ -0.44
CCDC130-202ENST00000540216 ANGPTL4Q9BY76 406 aa12.3□□□□□ -0.44
CCDC130-202ENST00000540216 NUF2Q9BZD4 464 aa12.3□□□□□ -0.44
CCDC130-202ENST00000540216 AKTIPQ9H8T0 292 aa12.3□□□□□ -0.44
CCDC130-202ENST00000540216 ANKRA2Q9H9E1 313 aa12.3□□□□□ -0.44
CCDC130-202ENST00000540216 MEAF6Q9HAF1 191 aa12.3□□□□□ -0.44
CCDC130-202ENST00000540216 PROK2Q9HC23 129 aa12.3□□□□□ -0.44
CCDC130-202ENST00000540216 ZFP64Q9NPA5 681 aa12.3□□□□□ -0.44
CCDC130-202ENST00000540216 NTMQ9P121 344 aa12.3□□□□□ -0.44
CCDC130-202ENST00000540216 SPTAN1Q13813 2472 aaKnown RBP12.3□□□□□ -0.44
CCDC130-202ENST00000540216 USP9YO00507 2555 aaPredicted RBP12.29□□□□□ -0.44
CCDC130-202ENST00000540216 TRGV8A0A0C4DH27 118 aa12.29□□□□□ -0.44
CCDC130-202ENST00000540216 HDAC3O15379 428 aa12.29□□□□□ -0.44
CCDC130-202ENST00000540216 LRRTM2O43300 516 aa12.29□□□□□ -0.44
CCDC130-202ENST00000540216 CDC40O60508 579 aaKnown RBP eCLIP12.29□□□□□ -0.44
CCDC130-202ENST00000540216 TRIM3O75382 744 aaPredicted RBP12.29□□□□□ -0.44
CCDC130-202ENST00000540216 WISP2O76076 250 aa12.29□□□□□ -0.44
CCDC130-202ENST00000540216 IGHG3P01860 377 aa12.29□□□□□ -0.44
CCDC130-202ENST00000540216 G6PDP11413 515 aa12.29□□□□□ -0.44
CCDC130-202ENST00000540216 LBPP18428 481 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms