RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 TMEM19Q96HH6 336 aa9.46□□□□□ -0.9
TRAF1-202ENST00000540010 GPER1Q99527 375 aa9.46□□□□□ -0.9
TRAF1-202ENST00000540010 CDADC1Q9BWV3 514 aa9.46□□□□□ -0.9
TRAF1-202ENST00000540010 BCL2L14Q9BZR8 327 aa9.46□□□□□ -0.9
TRAF1-202ENST00000540010 GORASP2Q9H8Y8 452 aa9.46□□□□□ -0.9
TRAF1-202ENST00000540010 MRPL15Q9P015 296 aaKnown RBP9.46□□□□□ -0.9
TRAF1-202ENST00000540010 CKLFQ9UBR5 152 aa9.46□□□□□ -0.9
TRAF1-202ENST00000540010 ZNF69Q9UC07 566 aa9.46□□□□□ -0.9
TRAF1-202ENST00000540010 IFT52Q9Y366 437 aa9.46□□□□□ -0.9
TRAF1-202ENST00000540010 HSPE1-MOB4S4R3N1 261 aa9.46□□□□□ -0.9
TRAF1-202ENST00000540010 IL7P13232 177 aa9.46□□□□□ -0.9
TRAF1-202ENST00000540010 VASPP50552 380 aaPredicted RBP9.46□□□□□ -0.9
TRAF1-202ENST00000540010 SELENOWP63302 87 aa9.46□□□□□ -0.9
TRAF1-202ENST00000540010 VLDLRP98155 873 aa9.46□□□□□ -0.9
TRAF1-202ENST00000540010 SLC25A24Q6NUK1 477 aa9.46□□□□□ -0.9
TRAF1-202ENST00000540010 SLC36A4Q6YBV0 504 aa9.46□□□□□ -0.9
TRAF1-202ENST00000540010 TMED4Q7Z7H5 227 aa9.46□□□□□ -0.9
TRAF1-202ENST00000540010 OR6Q1Q8NGQ2 317 aa9.46□□□□□ -0.9
TRAF1-202ENST00000540010 RHOXF1Q8NHV9 184 aa9.46□□□□□ -0.9
TRAF1-202ENST00000540010 CEP76Q8TAP6 659 aa9.46□□□□□ -0.9
TRAF1-202ENST00000540010 CIDECQ96AQ7 238 aaPredicted RBP9.46□□□□□ -0.9
TRAF1-202ENST00000540010 FBXL12Q9NXK8 326 aa9.46□□□□□ -0.9
TRAF1-202ENST00000540010 A0A1B0GVT2 93 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 A0A1W2PRQ8 180 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 AGAP5A6NIR3 686 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 SCAMP2O15127 329 aaKnown RBP9.45□□□□□ -0.9
TRAF1-202ENST00000540010 FRS3O43559 492 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 AP1G1O43747 822 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 ECDO95905 644 aaPredicted RBP9.45□□□□□ -0.9
TRAF1-202ENST00000540010 PTTG1O95997 202 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 BMP4P12644 408 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 UQCRC2P22695 453 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 PTGES3Q15185 160 aaKnown RBP9.45□□□□□ -0.9
TRAF1-202ENST00000540010 AAK1Q2M2I8 961 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 TMEM44Q2T9K0 475 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 SPRED1Q7Z699 444 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 NLGN4XQ8N0W4 816 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 SGCDQ92629 289 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 ZNF486Q96H40 463 aaPredicted RBP9.45□□□□□ -0.9
TRAF1-202ENST00000540010 NELL2Q99435 816 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 RPP25Q9BUL9 199 aaKnown RBP9.45□□□□□ -0.9
TRAF1-202ENST00000540010 OR2B2Q9GZK3 357 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 NMNAT1Q9HAN9 279 aaPredicted RBP9.45□□□□□ -0.9
TRAF1-202ENST00000540010 BOLA1Q9Y3E2 137 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 ENPP4Q9Y6X5 453 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 SPAG17Q6Q759 2223 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 FAM47E-STBD1D6RA91 191 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 L7N2F9 121 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 M0R3H8 397 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 PLD2O14939 933 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 VEGFDO43915 354 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 DRD5P21918 477 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 BMP8BP34820 402 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 GCGRP47871 477 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 SLC6A12P48065 614 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 PFN3P60673 137 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 TSPAN5P62079 268 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 PITPNAQ00169 270 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 TRAM2Q15035 370 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 NDUFA9Q16795 377 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 LEXMQ3ZCV2 418 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 ZNF691Q5VV52 312 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 CPZQ66K79 652 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 ZNF776Q68DI1 518 aaPredicted RBP9.45□□□□□ -0.9
TRAF1-202ENST00000540010 SLC25A25Q6KCM7 469 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 PNCKQ6P2M8 343 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 Q6ZNX1 250 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 ZNF765Q7L2R6 523 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 TRIM46Q7Z4K8 759 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 BMP8AQ7Z5Y6 402 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 SLITRK4Q8IW52 837 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 PLA2G15Q8NCC3 412 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 DENND6BQ8NEG7 585 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 RNASE11Q8TAA1 199 aaKnown RBP9.45□□□□□ -0.9
TRAF1-202ENST00000540010 ZNF300Q96RE9 604 aaPredicted RBP9.45□□□□□ -0.9
TRAF1-202ENST00000540010 BHLHE41Q9C0J9 482 aaPredicted RBP9.45□□□□□ -0.9
TRAF1-202ENST00000540010 SLC5A10A0PJK1 596 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 C12orf71A8MTZ7 269 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 B3GALT2O43825 422 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 ZNF3P17036 446 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 GPR4P46093 362 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 ARFIP1P53367 373 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 ILF3Q12906 894 aaKnown RBP eCLIP9.45□□□□□ -0.9
TRAF1-202ENST00000540010 ATXN7L3Q14CW9 347 aaPredicted RBP9.45□□□□□ -0.9
TRAF1-202ENST00000540010 BCL7AQ4VC05 210 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 BTN2A1Q7KYR7 527 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 CCDC28AQ8IWP9 274 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 ZNF548Q8NEK5 533 aaPredicted RBP9.45□□□□□ -0.9
TRAF1-202ENST00000540010 JPH3Q8WXH2 748 aaPredicted RBP9.45□□□□□ -0.9
TRAF1-202ENST00000540010 GPN2Q9H9Y4 310 aaPredicted RBP9.45□□□□□ -0.9
TRAF1-202ENST00000540010 TAS2R16Q9NYV7 291 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 GNG8Q9UK08 70 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 GRIP1Q9Y3R0 1128 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 OR1A2Q9Y585 309 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 ELOA3DA6NLF2 546 aaPredicted RBP9.45□□□□□ -0.9
TRAF1-202ENST00000540010 GABRR3A8MPY1 467 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 BLOC1S5-TXNDC5H3BN57 136 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 ADH1BP00325 375 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 S100A6P06703 90 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 FCARP24071 287 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms