RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 RNF111Q6ZNA4 994 aa12.02□□□□□ -0.49
CCDC42-202ENST00000539522 LINC00696Q6ZRV3 163 aa12.02□□□□□ -0.49
CCDC42-202ENST00000539522 MSANTD1Q6ZTZ1 278 aa12.02□□□□□ -0.49
CCDC42-202ENST00000539522 RETREG3Q86VR2 466 aa12.02□□□□□ -0.49
CCDC42-202ENST00000539522 MSRB3Q8IXL7 192 aa12.02□□□□□ -0.49
CCDC42-202ENST00000539522 SAMD14Q8IZD0 417 aaPredicted RBP12.02□□□□□ -0.49
CCDC42-202ENST00000539522 DPP10Q8N608 796 aa12.02□□□□□ -0.49
CCDC42-202ENST00000539522 NATD1Q8N6N6 113 aa12.02□□□□□ -0.49
CCDC42-202ENST00000539522 RBMXL3Q8N7X1 1067 aaKnown RBP12.02□□□□□ -0.49
CCDC42-202ENST00000539522 OR7G1Q8NGA0 311 aa12.02□□□□□ -0.49
CCDC42-202ENST00000539522 DNAJB8Q8NHS0 232 aa12.02□□□□□ -0.49
CCDC42-202ENST00000539522 GOT1L1Q8NHS2 421 aaPredicted RBP12.02□□□□□ -0.49
CCDC42-202ENST00000539522 NUBPLQ8TB37 319 aa12.02□□□□□ -0.49
CCDC42-202ENST00000539522 GTF2H4Q92759 462 aa12.02□□□□□ -0.49
CCDC42-202ENST00000539522 ZBED6CLQ96FA7 236 aaPredicted RBP12.02□□□□□ -0.49
CCDC42-202ENST00000539522 C16orf58Q96GQ5 468 aa12.02□□□□□ -0.49
CCDC42-202ENST00000539522 CCDC115Q96NT0 180 aa12.02□□□□□ -0.49
CCDC42-202ENST00000539522 NXF5Q9H1B4 397 aaKnown RBP12.02□□□□□ -0.49
CCDC42-202ENST00000539522 GIMAP4Q9NUV9 329 aa12.02□□□□□ -0.49
CCDC42-202ENST00000539522 ATAD3AQ9NVI7 634 aa12.02□□□□□ -0.49
CCDC42-202ENST00000539522 GPATCH2Q9NW75 528 aa12.02□□□□□ -0.49
CCDC42-202ENST00000539522 SLAMF8Q9P0V8 285 aa12.02□□□□□ -0.49
CCDC42-202ENST00000539522 MAP10Q9P2G4 905 aa12.02□□□□□ -0.49
CCDC42-202ENST00000539522 MYOTQ9UBF9 498 aa12.02□□□□□ -0.49
CCDC42-202ENST00000539522 BTNL2Q9UIR0 455 aa12.02□□□□□ -0.49
CCDC42-202ENST00000539522 HEMK1Q9Y5R4 338 aaPredicted RBP12.02□□□□□ -0.49
CCDC42-202ENST00000539522 PRSS51A0A1B0GVH4 220 aa12.01□□□□□ -0.49
CCDC42-202ENST00000539522 OR2J2O76002 312 aa12.01□□□□□ -0.49
CCDC42-202ENST00000539522 ZFAND5O76080 213 aa12.01□□□□□ -0.49
CCDC42-202ENST00000539522 WDPCPO95876 746 aa12.01□□□□□ -0.49
CCDC42-202ENST00000539522 MAN2A2P49641 1150 aa12.01□□□□□ -0.49
CCDC42-202ENST00000539522 KCNJ2P63252 427 aa12.01□□□□□ -0.49
CCDC42-202ENST00000539522 MFAP5Q13361 173 aa12.01□□□□□ -0.49
CCDC42-202ENST00000539522 NNATQ16517 81 aa12.01□□□□□ -0.49
CCDC42-202ENST00000539522 COLEC12Q5KU26 742 aa12.01□□□□□ -0.49
CCDC42-202ENST00000539522 IGFL3Q6UXB1 125 aa12.01□□□□□ -0.49
CCDC42-202ENST00000539522 TMEM64Q6YI46 380 aa12.01□□□□□ -0.49
CCDC42-202ENST00000539522 RPS19BP1Q86WX3 136 aaKnown RBP12.01□□□□□ -0.49
CCDC42-202ENST00000539522 DEFB107AQ8IZN7 70 aa12.01□□□□□ -0.49
CCDC42-202ENST00000539522 PGAM4Q8N0Y7 254 aa12.01□□□□□ -0.49
CCDC42-202ENST00000539522 CATSPER1Q8NEC5 780 aa12.01□□□□□ -0.49
CCDC42-202ENST00000539522 VPS37AQ8NEZ2 397 aa12.01□□□□□ -0.49
CCDC42-202ENST00000539522 OR4N2Q8NGD1 307 aa12.01□□□□□ -0.49
CCDC42-202ENST00000539522 OR5AK3PQ8NH89 298 aa12.01□□□□□ -0.49
CCDC42-202ENST00000539522 VPS50Q96JG6 964 aa12.01□□□□□ -0.49
CCDC42-202ENST00000539522 MAGED4Q96JG8 741 aa12.01□□□□□ -0.49
CCDC42-202ENST00000539522 SIGLEC12Q96PQ1 595 aa12.01□□□□□ -0.49
CCDC42-202ENST00000539522 OR52E6Q96RD3 313 aa12.01□□□□□ -0.49
CCDC42-202ENST00000539522 RASL10BQ96S79 203 aa12.01□□□□□ -0.49
CCDC42-202ENST00000539522 THTPAQ9BU02 230 aa12.01□□□□□ -0.49
CCDC42-202ENST00000539522 DEFB126Q9BYW3 111 aa12.01□□□□□ -0.49
CCDC42-202ENST00000539522 PAIP1Q9H074 479 aaKnown RBP12.01□□□□□ -0.49
CCDC42-202ENST00000539522 RMND5AQ9H871 391 aa12.01□□□□□ -0.49
CCDC42-202ENST00000539522 FOLH1BQ9HBA9 442 aa12.01□□□□□ -0.49
CCDC42-202ENST00000539522 ZNF71Q9NQZ8 489 aaPredicted RBP12.01□□□□□ -0.49
CCDC42-202ENST00000539522 FAM120CQ9NX05 1096 aaKnown RBP12.01□□□□□ -0.49
CCDC42-202ENST00000539522 BCAP29Q9UHQ4 241 aa12.01□□□□□ -0.49
CCDC42-202ENST00000539522 PRPF19Q9UMS4 504 aaKnown RBP12.01□□□□□ -0.49
CCDC42-202ENST00000539522 GPR55Q9Y2T6 319 aaPredicted RBP12.01□□□□□ -0.49
CCDC42-202ENST00000539522 TLN1Q9Y490 2541 aaKnown RBP12.01□□□□□ -0.49
CCDC42-202ENST00000539522 TRBV5-3A0A0A0MS03 114 aa12□□□□□ -0.49
CCDC42-202ENST00000539522 OR6C76A6NM76 312 aa12□□□□□ -0.49
CCDC42-202ENST00000539522 ADAM10O14672 748 aa12□□□□□ -0.49
CCDC42-202ENST00000539522 ITGA10O75578 1167 aa12□□□□□ -0.49
CCDC42-202ENST00000539522 NEURL1O76050 574 aa12□□□□□ -0.49
CCDC42-202ENST00000539522 OR6B1O95007 311 aa12□□□□□ -0.49
CCDC42-202ENST00000539522 GSNP06396 782 aa12□□□□□ -0.49
CCDC42-202ENST00000539522 ABCB1P08183 1280 aaPredicted RBP12□□□□□ -0.49
CCDC42-202ENST00000539522 ACP2P11117 423 aa12□□□□□ -0.49
CCDC42-202ENST00000539522 TRHRP34981 398 aaPredicted RBP12□□□□□ -0.49
CCDC42-202ENST00000539522 CD96P40200 585 aa12□□□□□ -0.49
CCDC42-202ENST00000539522 MVDP53602 400 aa12□□□□□ -0.49
CCDC42-202ENST00000539522 PSME3P61289 254 aa12□□□□□ -0.49
CCDC42-202ENST00000539522 LRRC74AQ0VAA2 488 aa12□□□□□ -0.49
CCDC42-202ENST00000539522 TUBA3CQ13748 450 aa12□□□□□ -0.49
CCDC42-202ENST00000539522 MAPKAPK3Q16644 382 aa12□□□□□ -0.49
CCDC42-202ENST00000539522 PIGGQ5H8A4 983 aa12□□□□□ -0.49
CCDC42-202ENST00000539522 ANXA8L1Q5VT79 327 aa12□□□□□ -0.49
CCDC42-202ENST00000539522 AGAP7PQ5VUJ5 663 aa12□□□□□ -0.49
CCDC42-202ENST00000539522 TUBA3EQ6PEY2 450 aa12□□□□□ -0.49
CCDC42-202ENST00000539522 ISLR2Q6UXK2 745 aa12□□□□□ -0.49
CCDC42-202ENST00000539522 LGI4Q8N135 537 aa12□□□□□ -0.49
CCDC42-202ENST00000539522 C10orf111Q8N326 155 aa12□□□□□ -0.49
CCDC42-202ENST00000539522 MDS2Q8NDY4 140 aa12□□□□□ -0.49
CCDC42-202ENST00000539522 NTNG2Q96CW9 530 aa12□□□□□ -0.49
CCDC42-202ENST00000539522 LRRC58Q96CX6 371 aa12□□□□□ -0.49
CCDC42-202ENST00000539522 OTUB1Q96FW1 271 aaPredicted RBP12□□□□□ -0.49
CCDC42-202ENST00000539522 ITCHQ96J02 903 aa12□□□□□ -0.49
CCDC42-202ENST00000539522 ART5Q96L15 291 aa12□□□□□ -0.49
CCDC42-202ENST00000539522 AGAP4Q96P64 663 aa12□□□□□ -0.49
CCDC42-202ENST00000539522 BTBD9Q96Q07 612 aa12□□□□□ -0.49
CCDC42-202ENST00000539522 CDRT15Q96T59 188 aa12□□□□□ -0.49
CCDC42-202ENST00000539522 ADNPQ9H2P0 1102 aa12□□□□□ -0.49
CCDC42-202ENST00000539522 TRIM45Q9H8W5 580 aaPredicted RBP12□□□□□ -0.49
CCDC42-202ENST00000539522 SH2D2AQ9NP31 389 aa12□□□□□ -0.49
CCDC42-202ENST00000539522 ANKRD10Q9NXR5 420 aa12□□□□□ -0.49
CCDC42-202ENST00000539522 TAS2R9Q9NYW1 312 aa12□□□□□ -0.49
CCDC42-202ENST00000539522 SLC25A37Q9NYZ2 338 aa12□□□□□ -0.49
CCDC42-202ENST00000539522 STMN3Q9NZ72 180 aa12□□□□□ -0.49
CCDC42-202ENST00000539522 COPS7AQ9UBW8 275 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms