RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 MYL12BO14950 172 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 LCMT2O60294 686 aaKnown RBP13.68□□□□□ -0.22
CDCA3-207ENST00000538862 LGI1O95970 557 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 HBQ1P09105 142 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 SLC35G4P0C7Q5 338 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 ACADMP11310 421 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 GSTM3P21266 225 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 GPC1P35052 558 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 GIPRP48546 466 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 KHKP50053 298 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 EFNB1P98172 346 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 BCL2A1Q16548 175 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 NDUFAF5Q5TEU4 345 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 C1orf94Q6P1W5 598 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 BHLHB9Q6PI77 547 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 TMEM64Q6YI46 380 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 ZER1Q7Z7L7 766 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 PEX5LQ8IYB4 626 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 ERLEC1Q96DZ1 483 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 WDFY2Q96P53 400 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 TM7SF3Q9NS93 570 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 TVP23BQ9NYZ1 205 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 NPAP1Q9NZP6 1156 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 TRPC4Q9UBN4 977 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 TLX2O43763 284 aaPredicted RBP13.68□□□□□ -0.22
CDCA3-207ENST00000538862 PRKYO43930 277 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 TPST2O60704 377 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 RAB36O95755 333 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 PCCBP05166 539 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 MAGP20916 626 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 MMP11P24347 488 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 CLCNKAP51800 687 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 SEC13P55735 322 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 CDK5Q00535 292 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 PRDX1Q06830 199 aaKnown RBP13.68□□□□□ -0.22
CDCA3-207ENST00000538862 KLHL22Q53GT1 634 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 PRAMEF8Q5VWM4 474 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 PRAMEF7Q5VXH5 474 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 WDR53Q7Z5U6 358 aaPredicted RBP13.68□□□□□ -0.22
CDCA3-207ENST00000538862 PHC2Q8IXK0 858 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 AMER3Q8N944 861 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 LINC01555Q8NAE3 123 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 IL17RDQ8NFM7 739 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 OR4K5Q8NGD3 323 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 SFXN5Q8TD22 340 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 NR4A3Q92570 626 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 FGF11Q92914 225 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 PRRC1Q96M27 445 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 LGR4Q9BXB1 951 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 BARHL1Q9BZE3 327 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 IRF2BPLQ9H1B7 796 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 MOV10Q9HCE1 1003 aaKnown RBP13.68□□□□□ -0.22
CDCA3-207ENST00000538862 PRMT8Q9NR22 394 aaPredicted RBP13.68□□□□□ -0.22
CDCA3-207ENST00000538862 MAN2C1Q9NTJ4 1040 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 ZCCHC3Q9NUD5 404 aaKnown RBP13.68□□□□□ -0.22
CDCA3-207ENST00000538862 MRPS18AQ9NVS2 196 aaKnown RBP13.68□□□□□ -0.22
CDCA3-207ENST00000538862 FBXL12Q9NXK8 326 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 TESQ9UGI8 421 aaKnown RBP13.68□□□□□ -0.22
CDCA3-207ENST00000538862 GPR179Q6PRD1 2367 aa13.68□□□□□ -0.22
CDCA3-207ENST00000538862 NUMA1Q14980 2115 aa13.67□□□□□ -0.22
CDCA3-207ENST00000538862 PTPRZ1P23471 2315 aaPredicted RBP13.67□□□□□ -0.22
CDCA3-207ENST00000538862 SDK1Q7Z5N4 2213 aa13.67□□□□□ -0.22
CDCA3-207ENST00000538862 A0A0G2JPF8 293 aa13.67□□□□□ -0.22
CDCA3-207ENST00000538862 IQCMA0A1B0GVH7 501 aa13.67□□□□□ -0.22
CDCA3-207ENST00000538862 IRGMA1A4Y4 181 aa13.67□□□□□ -0.22
CDCA3-207ENST00000538862 LRIT2A6NDA9 550 aa13.67□□□□□ -0.22
CDCA3-207ENST00000538862 HNRNPCL2B2RXH8 293 aa13.67□□□□□ -0.22
CDCA3-207ENST00000538862 HNRNPCL3B7ZW38 293 aa13.67□□□□□ -0.22
CDCA3-207ENST00000538862 M0R3H8 397 aa13.67□□□□□ -0.22
CDCA3-207ENST00000538862 CASC3O15234 703 aaKnown RBP13.67□□□□□ -0.22
CDCA3-207ENST00000538862 HNRNPCL4P0DMR1 293 aa13.67□□□□□ -0.22
CDCA3-207ENST00000538862 NTSP30990 170 aa13.67□□□□□ -0.22
CDCA3-207ENST00000538862 HOXD12P35452 270 aa13.67□□□□□ -0.22
CDCA3-207ENST00000538862 CASP3P42574 277 aa13.67□□□□□ -0.22
CDCA3-207ENST00000538862 SSR2P43308 183 aa13.67□□□□□ -0.22
CDCA3-207ENST00000538862 TAS2R38P59533 333 aa13.67□□□□□ -0.22
CDCA3-207ENST00000538862 BNC1Q01954 994 aa13.67□□□□□ -0.22
CDCA3-207ENST00000538862 RUNX1T1Q06455 604 aa13.67□□□□□ -0.22
CDCA3-207ENST00000538862 DMPKQ09013 629 aa13.67□□□□□ -0.22
CDCA3-207ENST00000538862 GINS1Q14691 196 aa13.67□□□□□ -0.22
CDCA3-207ENST00000538862 ZIC1Q15915 447 aa13.67□□□□□ -0.22
CDCA3-207ENST00000538862 WSCD2Q2TBF2 565 aa13.67□□□□□ -0.22
CDCA3-207ENST00000538862 SYT14P1Q58G82 188 aa13.67□□□□□ -0.22
CDCA3-207ENST00000538862 PIP5KL1Q5T9C9 394 aa13.67□□□□□ -0.22
CDCA3-207ENST00000538862 COMTD1Q86VU5 262 aa13.67□□□□□ -0.22
CDCA3-207ENST00000538862 SPEM1Q8N4L4 309 aa13.67□□□□□ -0.22
CDCA3-207ENST00000538862 TP53I13Q8NBR0 393 aaPredicted RBP13.67□□□□□ -0.22
CDCA3-207ENST00000538862 MORN4Q8NDC4 146 aa13.67□□□□□ -0.22
CDCA3-207ENST00000538862 OR52I1Q8NGK6 324 aa13.67□□□□□ -0.22
CDCA3-207ENST00000538862 OR5D16Q8NGK9 328 aa13.67□□□□□ -0.22
CDCA3-207ENST00000538862 SUN3Q8TAQ9 357 aa13.67□□□□□ -0.22
CDCA3-207ENST00000538862 UCN3Q969E3 161 aa13.67□□□□□ -0.22
CDCA3-207ENST00000538862 MOAP1Q96BY2 351 aa13.67□□□□□ -0.22
CDCA3-207ENST00000538862 FERD3LQ96RJ6 166 aa13.67□□□□□ -0.22
CDCA3-207ENST00000538862 BBS4Q96RK4 519 aa13.67□□□□□ -0.22
CDCA3-207ENST00000538862 CTRCQ99895 268 aa13.67□□□□□ -0.22
CDCA3-207ENST00000538862 TEX101Q9BY14 249 aa13.67□□□□□ -0.22
CDCA3-207ENST00000538862 MIR1-1HGQ9H1L0 117 aa13.67□□□□□ -0.22
CDCA3-207ENST00000538862 ERVK13-1Q9NX77 482 aa13.67□□□□□ -0.22
CDCA3-207ENST00000538862 RABL2BQ9UNT1 228 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms