RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 ZIC2O95409 532 aaPredicted RBP12.59□□□□□ -0.39
CD9-208ENST00000538834 ZNF24P17028 368 aa12.59□□□□□ -0.39
CD9-208ENST00000538834 MAPK1P28482 360 aa12.59□□□□□ -0.39
CD9-208ENST00000538834 KCNK10P57789 538 aa12.59□□□□□ -0.39
CD9-208ENST00000538834 GPR85P60893 370 aa12.59□□□□□ -0.39
CD9-208ENST00000538834 PTGR1Q14914 329 aa12.59□□□□□ -0.39
CD9-208ENST00000538834 RPS6KA2Q15349 733 aa12.59□□□□□ -0.39
CD9-208ENST00000538834 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.59□□□□□ -0.39
CD9-208ENST00000538834 C4orf17Q53FE4 359 aa12.59□□□□□ -0.39
CD9-208ENST00000538834 C6orf163Q5TEZ5 329 aa12.59□□□□□ -0.39
CD9-208ENST00000538834 IL23RQ5VWK5 629 aa12.59□□□□□ -0.39
CD9-208ENST00000538834 ANKRD26P1Q6NSI1 321 aa12.59□□□□□ -0.39
CD9-208ENST00000538834 TMEM64Q6YI46 380 aa12.59□□□□□ -0.39
CD9-208ENST00000538834 RGS9BPQ6ZS82 235 aa12.59□□□□□ -0.39
CD9-208ENST00000538834 ZNF551Q7Z340 670 aaPredicted RBP12.59□□□□□ -0.39
CD9-208ENST00000538834 HDXQ7Z353 690 aa12.59□□□□□ -0.39
CD9-208ENST00000538834 NUP54Q7Z3B4 507 aa12.59□□□□□ -0.39
CD9-208ENST00000538834 LIX1Q8N485 282 aa12.59□□□□□ -0.39
CD9-208ENST00000538834 ANKRD42Q8N9B4 389 aa12.59□□□□□ -0.39
CD9-208ENST00000538834 OR52N2Q8NGI0 321 aa12.59□□□□□ -0.39
CD9-208ENST00000538834 PPP1R14CQ8TAE6 165 aa12.59□□□□□ -0.39
CD9-208ENST00000538834 NUDT8Q8WV74 236 aa12.59□□□□□ -0.39
CD9-208ENST00000538834 CIDECQ96AQ7 238 aaPredicted RBP12.59□□□□□ -0.39
CD9-208ENST00000538834 LMF2Q9BU23 707 aaKnown RBP12.59□□□□□ -0.39
CD9-208ENST00000538834 TTTY12Q9BZ98 90 aa12.59□□□□□ -0.39
CD9-208ENST00000538834 IL1RL2Q9HB29 575 aa12.59□□□□□ -0.39
CD9-208ENST00000538834 FOLH1BQ9HBA9 442 aa12.59□□□□□ -0.39
CD9-208ENST00000538834 PFDN4Q9NQP4 134 aa12.59□□□□□ -0.39
CD9-208ENST00000538834 SIRT3Q9NTG7 399 aaPredicted RBP12.59□□□□□ -0.39
CD9-208ENST00000538834 TUBA8Q9NY65 449 aaPredicted RBP12.59□□□□□ -0.39
CD9-208ENST00000538834 BCAP29Q9UHQ4 241 aa12.59□□□□□ -0.39
CD9-208ENST00000538834 MED12LQ86YW9 2145 aa12.59□□□□□ -0.39
CD9-208ENST00000538834 INTS1Q8N201 2190 aaKnown RBP12.59□□□□□ -0.39
CD9-208ENST00000538834 CRYBG3Q68DQ2 2970 aa12.58□□□□□ -0.4
CD9-208ENST00000538834 OR6C70A6NIJ9 312 aa12.58□□□□□ -0.4
CD9-208ENST00000538834 CAPN14A8MX76 684 aa12.58□□□□□ -0.4
CD9-208ENST00000538834 PDPK1O15530 556 aa12.58□□□□□ -0.4
CD9-208ENST00000538834 SCN2BO60939 215 aa12.58□□□□□ -0.4
CD9-208ENST00000538834 NME6O75414 186 aaPredicted RBP12.58□□□□□ -0.4
CD9-208ENST00000538834 UNC5CO95185 931 aa12.58□□□□□ -0.4
CD9-208ENST00000538834 LAMP1P11279 417 aa12.58□□□□□ -0.4
CD9-208ENST00000538834 G6PDP11413 515 aa12.58□□□□□ -0.4
CD9-208ENST00000538834 PIGAP37287 484 aa12.58□□□□□ -0.4
CD9-208ENST00000538834 MC3RP41968 323 aa12.58□□□□□ -0.4
CD9-208ENST00000538834 CASP3P42574 277 aa12.58□□□□□ -0.4
CD9-208ENST00000538834 CA7P43166 264 aa12.58□□□□□ -0.4
CD9-208ENST00000538834 DNASE1L1P49184 302 aa12.58□□□□□ -0.4
CD9-208ENST00000538834 NCBP2P52298 156 aaKnown RBP eCLIP12.58□□□□□ -0.4
CD9-208ENST00000538834 FBXW4P57775 412 aa12.58□□□□□ -0.4
CD9-208ENST00000538834 MAD2L1Q13257 205 aaPredicted RBP12.58□□□□□ -0.4
CD9-208ENST00000538834 TBCELQ5QJ74 424 aa12.58□□□□□ -0.4
CD9-208ENST00000538834 HLA-DQA1Q5Y7H0 255 aa12.58□□□□□ -0.4
CD9-208ENST00000538834 DESI1Q6ICB0 168 aa12.58□□□□□ -0.4
CD9-208ENST00000538834 GFRALQ6UXV0 394 aa12.58□□□□□ -0.4
CD9-208ENST00000538834 GK5Q6ZS86 529 aa12.58□□□□□ -0.4
CD9-208ENST00000538834 R3HCC1LQ7Z5L2 792 aaKnown RBP12.58□□□□□ -0.4
CD9-208ENST00000538834 SLC34A3Q8N130 599 aa12.58□□□□□ -0.4
CD9-208ENST00000538834 TMEM251Q8N6I4 163 aa12.58□□□□□ -0.4
CD9-208ENST00000538834 NATD1Q8N6N6 113 aa12.58□□□□□ -0.4
CD9-208ENST00000538834 OR7A2PQ8NGA2 310 aa12.58□□□□□ -0.4
CD9-208ENST00000538834 CLHC1Q8NHS4 586 aa12.58□□□□□ -0.4
CD9-208ENST00000538834 PRR7Q8TB68 274 aa12.58□□□□□ -0.4
CD9-208ENST00000538834 ZNF75CPQ92670 426 aaPredicted RBP12.58□□□□□ -0.4
CD9-208ENST00000538834 GFM2Q969S9 779 aaKnown RBP12.58□□□□□ -0.4
CD9-208ENST00000538834 PPCDCQ96CD2 204 aa12.58□□□□□ -0.4
CD9-208ENST00000538834 TUBGCP3Q96CW5 907 aa12.58□□□□□ -0.4
CD9-208ENST00000538834 UBQLN3Q9H347 655 aa12.58□□□□□ -0.4
CD9-208ENST00000538834 MANSC1Q9H8J5 431 aa12.58□□□□□ -0.4
CD9-208ENST00000538834 QPCTLQ9NXS2 382 aa12.58□□□□□ -0.4
CD9-208ENST00000538834 TAS2R9Q9NYW1 312 aa12.58□□□□□ -0.4
CD9-208ENST00000538834 SLC5A6Q9Y289 635 aa12.58□□□□□ -0.4
CD9-208ENST00000538834 NBPF19A0A087WUL8 3843 aa12.57□□□□□ -0.4
CD9-208ENST00000538834 TTC36A6NLP5 189 aa12.57□□□□□ -0.4
CD9-208ENST00000538834 NPIPA5E9PKD4 350 aa12.57□□□□□ -0.4
CD9-208ENST00000538834 HDAC3O15379 428 aa12.57□□□□□ -0.4
CD9-208ENST00000538834 AKAP10O43572 662 aa12.57□□□□□ -0.4
CD9-208ENST00000538834 HS6ST1O60243 411 aa12.57□□□□□ -0.4
CD9-208ENST00000538834 UGT2B11O75310 529 aa12.57□□□□□ -0.4
CD9-208ENST00000538834 ERN1O75460 977 aaKnown RBP12.57□□□□□ -0.4
CD9-208ENST00000538834 LRATO95237 230 aa12.57□□□□□ -0.4
CD9-208ENST00000538834 P04436 131 aa12.57□□□□□ -0.4
CD9-208ENST00000538834 ALDOCP09972 364 aaKnown RBP12.57□□□□□ -0.4
CD9-208ENST00000538834 PRPS1L1P21108 318 aa12.57□□□□□ -0.4
CD9-208ENST00000538834 NTSP30990 170 aa12.57□□□□□ -0.4
CD9-208ENST00000538834 RPL3P39023 403 aaKnown RBP12.57□□□□□ -0.4
CD9-208ENST00000538834 RFC3P40938 356 aa12.57□□□□□ -0.4
CD9-208ENST00000538834 TMED10P49755 219 aaKnown RBP12.57□□□□□ -0.4
CD9-208ENST00000538834 PNLIPRP2P54317 469 aa12.57□□□□□ -0.4
CD9-208ENST00000538834 GAS1P54826 345 aa12.57□□□□□ -0.4
CD9-208ENST00000538834 DIO3P55073 304 aa12.57□□□□□ -0.4
CD9-208ENST00000538834 WNT3P56703 355 aa12.57□□□□□ -0.4
CD9-208ENST00000538834 NRG3P56975 720 aa12.57□□□□□ -0.4
CD9-208ENST00000538834 CORO7P57737 925 aa12.57□□□□□ -0.4
CD9-208ENST00000538834 SNTA1Q13424 505 aa12.57□□□□□ -0.4
CD9-208ENST00000538834 PDCD2Q16342 344 aaPredicted RBP12.57□□□□□ -0.4
CD9-208ENST00000538834 TMEM107Q6UX40 140 aa12.57□□□□□ -0.4
CD9-208ENST00000538834 MAVSQ7Z434 540 aa12.57□□□□□ -0.4
CD9-208ENST00000538834 SPPL2CQ8IUH8 684 aa12.57□□□□□ -0.4
CD9-208ENST00000538834 TRIM42Q8IWZ5 723 aa12.57□□□□□ -0.4
CD9-208ENST00000538834 GHDCQ8N2G8 530 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms