RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 KCNC4Q03721 635 aa13.2□□□□□ -0.3
ACTN1-205ENST00000538545 NPTX1Q15818 432 aa13.2□□□□□ -0.3
ACTN1-205ENST00000538545 ZNF628Q5EBL2 1059 aa13.2□□□□□ -0.3
ACTN1-205ENST00000538545 ZNF311Q5JNZ3 666 aa13.2□□□□□ -0.3
ACTN1-205ENST00000538545 CLVS1Q8IUQ0 354 aaPredicted RBP13.2□□□□□ -0.3
ACTN1-205ENST00000538545 ENTHD1Q8IYW4 607 aa13.2□□□□□ -0.3
ACTN1-205ENST00000538545 OR4N2Q8NGD1 307 aa13.2□□□□□ -0.3
ACTN1-205ENST00000538545 ZNF347Q96SE7 839 aa13.2□□□□□ -0.3
ACTN1-205ENST00000538545 YIPF2Q9BWQ6 316 aa13.2□□□□□ -0.3
ACTN1-205ENST00000538545 DGCR6LQ9BY27 220 aa13.2□□□□□ -0.3
ACTN1-205ENST00000538545 ACTRT3Q9BYD9 372 aa13.2□□□□□ -0.3
ACTN1-205ENST00000538545 NDRG4Q9ULP0 352 aaKnown RBP13.2□□□□□ -0.3
ACTN1-205ENST00000538545 A4GNTQ9UNA3 340 aa13.2□□□□□ -0.3
ACTN1-205ENST00000538545 DTX4Q9Y2E6 619 aa13.2□□□□□ -0.3
ACTN1-205ENST00000538545 KLK4Q9Y5K2 254 aa13.2□□□□□ -0.3
ACTN1-205ENST00000538545 GXYLT2A0PJZ3 443 aa13.2□□□□□ -0.3
ACTN1-205ENST00000538545 CPSF4LA6NMK7 179 aaKnown RBP13.2□□□□□ -0.3
ACTN1-205ENST00000538545 OR10H3O60404 316 aa13.2□□□□□ -0.3
ACTN1-205ENST00000538545 GPR75O95800 540 aa13.2□□□□□ -0.3
ACTN1-205ENST00000538545 CDH2P19022 906 aaPredicted RBP13.2□□□□□ -0.3
ACTN1-205ENST00000538545 ELAVL4P26378 380 aaKnown RBP13.2□□□□□ -0.3
ACTN1-205ENST00000538545 SSTR4P31391 388 aa13.2□□□□□ -0.3
ACTN1-205ENST00000538545 LIMS1P48059 325 aa13.2□□□□□ -0.3
ACTN1-205ENST00000538545 HLCSP50747 726 aa13.2□□□□□ -0.3
ACTN1-205ENST00000538545 ARFIP1P53367 373 aa13.2□□□□□ -0.3
ACTN1-205ENST00000538545 MVKQ03426 396 aa13.2□□□□□ -0.3
ACTN1-205ENST00000538545 RAB39AQ14964 217 aa13.2□□□□□ -0.3
ACTN1-205ENST00000538545 MAPK14Q16539 360 aa13.2□□□□□ -0.3
ACTN1-205ENST00000538545 PRSS58Q8IYP2 241 aa13.2□□□□□ -0.3
ACTN1-205ENST00000538545 FAM81AQ8TBF8 368 aa13.2□□□□□ -0.3
ACTN1-205ENST00000538545 SFXN5Q8TD22 340 aa13.2□□□□□ -0.3
ACTN1-205ENST00000538545 AHCYL2Q96HN2 611 aaKnown RBP13.2□□□□□ -0.3
ACTN1-205ENST00000538545 PAPOLBQ9NRJ5 636 aaKnown RBP13.2□□□□□ -0.3
ACTN1-205ENST00000538545 MAT2BQ9NZL9 334 aa13.2□□□□□ -0.3
ACTN1-205ENST00000538545 TRIM64A6NGJ6 449 aa13.19□□□□□ -0.3
ACTN1-205ENST00000538545 PEX12O00623 359 aa13.19□□□□□ -0.3
ACTN1-205ENST00000538545 HYAL3O43820 417 aaPredicted RBP13.19□□□□□ -0.3
ACTN1-205ENST00000538545 ITGAMP11215 1152 aa13.19□□□□□ -0.3
ACTN1-205ENST00000538545 ITGA2P17301 1181 aa13.19□□□□□ -0.3
ACTN1-205ENST00000538545 ZNF10P21506 573 aaPredicted RBP13.19□□□□□ -0.3
ACTN1-205ENST00000538545 CSF2RBP32927 897 aa13.19□□□□□ -0.3
ACTN1-205ENST00000538545 TRHRP34981 398 aaPredicted RBP13.19□□□□□ -0.3
ACTN1-205ENST00000538545 DBPQ10586 325 aaPredicted RBP13.19□□□□□ -0.3
ACTN1-205ENST00000538545 DUSP8Q13202 625 aa13.19□□□□□ -0.3
ACTN1-205ENST00000538545 SHBQ15464 509 aa13.19□□□□□ -0.3
ACTN1-205ENST00000538545 PRICKLE4Q2TBC4 344 aa13.19□□□□□ -0.3
ACTN1-205ENST00000538545 PRTGQ2VWP7 1150 aa13.19□□□□□ -0.3
ACTN1-205ENST00000538545 GPR107Q5VW38 600 aa13.19□□□□□ -0.3
ACTN1-205ENST00000538545 CWF19L1Q69YN2 538 aaKnown RBP13.19□□□□□ -0.3
ACTN1-205ENST00000538545 BHLHB9Q6PI77 547 aa13.19□□□□□ -0.3
ACTN1-205ENST00000538545 PRR23CQ6ZRP0 262 aa13.19□□□□□ -0.3
ACTN1-205ENST00000538545 IQCHQ86VS3 1027 aa13.19□□□□□ -0.3
ACTN1-205ENST00000538545 CCDC103Q8IW40 242 aa13.19□□□□□ -0.3
ACTN1-205ENST00000538545 OR2L13Q8N349 312 aa13.19□□□□□ -0.3
ACTN1-205ENST00000538545 APH1BQ8WW43 257 aa13.19□□□□□ -0.3
ACTN1-205ENST00000538545 DNASE2BQ8WZ79 361 aa13.19□□□□□ -0.3
ACTN1-205ENST00000538545 DGCR14Q96DF8 476 aaKnown RBP13.19□□□□□ -0.3
ACTN1-205ENST00000538545 CLIP3Q96DZ5 547 aa13.19□□□□□ -0.3
ACTN1-205ENST00000538545 THAP11Q96EK4 314 aa13.19□□□□□ -0.3
ACTN1-205ENST00000538545 ERVK-18Q9QC07 812 aa13.19□□□□□ -0.3
ACTN1-205ENST00000538545 ATXN7L1Q9ULK2 861 aaPredicted RBP13.19□□□□□ -0.3
ACTN1-205ENST00000538545 WBP4O75554 376 aaKnown RBP13.19□□□□□ -0.3
ACTN1-205ENST00000538545 PDE9AO76083 593 aa13.19□□□□□ -0.3
ACTN1-205ENST00000538545 CCNB2O95067 398 aa13.19□□□□□ -0.3
ACTN1-205ENST00000538545 SLC5A2P31639 672 aa13.19□□□□□ -0.3
ACTN1-205ENST00000538545 MAP2K4P45985 399 aa13.19□□□□□ -0.3
ACTN1-205ENST00000538545 GABRA4P48169 554 aa13.19□□□□□ -0.3
ACTN1-205ENST00000538545 EPS8Q12929 822 aa13.19□□□□□ -0.3
ACTN1-205ENST00000538545 FRRS1Q6ZNA5 592 aa13.19□□□□□ -0.3
ACTN1-205ENST00000538545 TMPRSS9Q7Z410 1059 aa13.19□□□□□ -0.3
ACTN1-205ENST00000538545 KRT73Q86Y46 540 aa13.19□□□□□ -0.3
ACTN1-205ENST00000538545 GJD3Q8N144 294 aa13.19□□□□□ -0.3
ACTN1-205ENST00000538545 NRBF2Q96F24 287 aa13.19□□□□□ -0.3
ACTN1-205ENST00000538545 MS4A4EQ96PG1 132 aa13.19□□□□□ -0.3
ACTN1-205ENST00000538545 GPA33Q99795 319 aa13.19□□□□□ -0.3
ACTN1-205ENST00000538545 NUDT22Q9BRQ3 303 aa13.19□□□□□ -0.3
ACTN1-205ENST00000538545 ROGDIQ9GZN7 287 aa13.19□□□□□ -0.3
ACTN1-205ENST00000538545 LYRM4Q9HD34 91 aa13.19□□□□□ -0.3
ACTN1-205ENST00000538545 MS4A12Q9NXJ0 267 aa13.19□□□□□ -0.3
ACTN1-205ENST00000538545 SELENONQ9NZV5 590 aa13.19□□□□□ -0.3
ACTN1-205ENST00000538545 NDOR1Q9UHB4 597 aa13.19□□□□□ -0.3
ACTN1-205ENST00000538545 SMIM31A0A1B0GVY4 71 aa13.18□□□□□ -0.3
ACTN1-205ENST00000538545 HYKKA2RU49 373 aa13.18□□□□□ -0.3
ACTN1-205ENST00000538545 BMP10O95393 424 aa13.18□□□□□ -0.3
ACTN1-205ENST00000538545 KRT20P35900 424 aa13.18□□□□□ -0.3
ACTN1-205ENST00000538545 PGDP52209 483 aa13.18□□□□□ -0.3
ACTN1-205ENST00000538545 MGAT2Q10469 447 aa13.18□□□□□ -0.3
ACTN1-205ENST00000538545 LPAL2Q16609 132 aa13.18□□□□□ -0.3
ACTN1-205ENST00000538545 RFX4Q33E94 735 aa13.18□□□□□ -0.3
ACTN1-205ENST00000538545 COLEC12Q5KU26 742 aa13.18□□□□□ -0.3
ACTN1-205ENST00000538545 XAF1Q6GPH4 301 aa13.18□□□□□ -0.3
ACTN1-205ENST00000538545 TTLL10Q6ZVT0 673 aa13.18□□□□□ -0.3
ACTN1-205ENST00000538545 C17orf82Q86X59 251 aaPredicted RBP13.18□□□□□ -0.3
ACTN1-205ENST00000538545 ZSCAN32Q9NX65 697 aa13.18□□□□□ -0.3
ACTN1-205ENST00000538545 KCNE5Q9UJ90 142 aa13.18□□□□□ -0.3
ACTN1-205ENST00000538545 RNF6Q9Y252 685 aa13.18□□□□□ -0.3
ACTN1-205ENST00000538545 PATE3B3GLJ2 98 aa13.18□□□□□ -0.3
ACTN1-205ENST00000538545 OR10H2O60403 315 aa13.18□□□□□ -0.3
ACTN1-205ENST00000538545 UGT2B11O75310 529 aa13.18□□□□□ -0.3
ACTN1-205ENST00000538545 GKN3PP0CG01 181 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms