RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 CA13Q8N1Q1 262 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 AGGF1Q8N302 714 aaeCLIP3.35□□□□□ -1.87
PTPN22-211ENST00000538253 PNPLA1Q8N8W4 532 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 B3GNT7Q8NFL0 401 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 FLVCR1-AS1Q8TAF5 88 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 FBXO30Q8TB52 745 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 WDR20Q8TBZ3 569 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 CHTF18Q8WVB6 975 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 PYCR2Q96C36 320 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 FBXL20Q96IG2 436 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 SLC30A3Q99726 388 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 SEC22CQ9BRL7 303 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 PTGES2Q9H7Z7 377 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 P4HTMQ9NXG6 502 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 GALPQ9UBC7 116 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 SPATA2Q9UM82 520 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 ABCG2Q9UNQ0 655 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 ERVK-11Q9UQG0 969 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 NDUFAF1Q9Y375 327 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 TRAV20A0A0B4J274 112 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 CENPBD1B2RD01 187 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 C5orf58C9J3I9 102 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 G3V2L1 256 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 AP3D1O14617 1153 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 ANGPT2O15123 496 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 ATXN7O15265 892 aaPredicted RBP3.35□□□□□ -1.87
PTPN22-211ENST00000538253 SPAG7O75391 227 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 RDH16O75452 317 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 NTRK1P04629 796 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 PRDX6P30041 224 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 PEBP1P30086 187 aaKnown RBP3.35□□□□□ -1.87
PTPN22-211ENST00000538253 SLC9A3P48764 834 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 MAP2K6P52564 334 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 CLDN8P56748 225 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 CXADRP78310 365 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 RNF4P78317 190 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 IRF9Q00978 393 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 CHAF1BQ13112 559 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 FASTKQ14296 549 aaKnown RBP3.35□□□□□ -1.87
PTPN22-211ENST00000538253 MPEG1Q2M385 716 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 KRTCAP3Q53RY4 240 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 ARL13AQ5H913 290 aaPredicted RBP3.35□□□□□ -1.87
PTPN22-211ENST00000538253 TMEM211Q6ICI0 200 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 FAM180AQ6UWF9 173 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 VN1R4Q7Z5H5 301 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 RPS19BP1Q86WX3 136 aaKnown RBP3.35□□□□□ -1.87
PTPN22-211ENST00000538253 P3H2Q8IVL5 708 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 ZC3H7AQ8IWR0 971 aaKnown RBP3.35□□□□□ -1.87
PTPN22-211ENST00000538253 GSPT2Q8IYD1 628 aaKnown RBP3.35□□□□□ -1.87
PTPN22-211ENST00000538253 GALNT16Q8N428 558 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 C1orf52Q8N6N3 182 aaKnown RBP3.35□□□□□ -1.87
PTPN22-211ENST00000538253 ANKFN1Q8N957 763 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 CDRT4Q8N9R6 151 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 RCBTB1Q8NDN9 531 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 CREB3L4Q8TEY5 395 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 MZB1Q8WU39 189 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 ASB15Q8WXK1 588 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 UCN3Q969E3 161 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 MARC2Q969Z3 335 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 TESCQ96BS2 214 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 CMTM5Q96DZ9 223 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 MAP6Q96JE9 813 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 SPRY4Q9C004 299 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 TRIM15Q9C019 465 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 KCNN2Q9H2S1 579 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 GSTO2Q9H4Y5 243 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 PLAC1Q9HBJ0 212 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 SLAMF7Q9NQ25 335 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 LEF1Q9UJU2 399 aaPredicted RBP3.35□□□□□ -1.87
PTPN22-211ENST00000538253 PPIEQ9UNP9 301 aaKnown RBP3.35□□□□□ -1.87
PTPN22-211ENST00000538253 LHX6Q9UPM6 363 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 RNF11Q9Y3C5 154 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 OR10H1Q9Y4A9 318 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 ATG2BQ96BY7 2078 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 A0A087WZY1 265 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 TCRBV16S1A1N1A0A5B0 115 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 GJE1A6NN92 205 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 hCG_2039718K7EN88 272 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 TGFB1P01137 390 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 SHBGP04278 402 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 S100A9P06702 114 aaKnown RBP3.35□□□□□ -1.87
PTPN22-211ENST00000538253 CPMP14384 443 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 PRKCAP17252 672 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 IL12BP29460 328 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 GMPRP36959 345 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 XKP51811 444 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 MANFP55145 182 aaKnown RBP3.35□□□□□ -1.87
PTPN22-211ENST00000538253 LIM2P55344 173 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 SUMO3P55854 103 aaPredicted RBP3.35□□□□□ -1.87
PTPN22-211ENST00000538253 ARG2P78540 354 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 IGLV3-21P80748 117 aaPredicted RBP3.35□□□□□ -1.87
PTPN22-211ENST00000538253 TLE3Q04726 772 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 MAP4K2Q12851 820 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 FADDQ13158 208 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 ZNF460Q14592 562 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 PCLAFQ15004 111 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 BTBD16Q32M84 506 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 EIPR1Q53HC9 387 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 SFT2D3Q587I9 215 aa3.35□□□□□ -1.87
PTPN22-211ENST00000538253 TMEM198Q66K66 360 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms