RNA–Protein interactions for RNA: ENST00000537230.2

TRIM25-202, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 2,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-202ENST00000537230 MADCAM1Q13477 382 aa12.11□□□□□ -0.47
TRIM25-202ENST00000537230 ZNF79Q15937 498 aa12.11□□□□□ -0.47
TRIM25-202ENST00000537230 IQCF1Q8N6M8 205 aa12.11□□□□□ -0.47
TRIM25-202ENST00000537230 ASCC1Q8N9N2 400 aaKnown RBP12.11□□□□□ -0.47
TRIM25-202ENST00000537230 OR2L3Q8NG85 312 aa12.11□□□□□ -0.47
TRIM25-202ENST00000537230 ZG16BQ96DA0 208 aa12.11□□□□□ -0.47
TRIM25-202ENST00000537230 TMCO6Q96DC7 493 aa12.11□□□□□ -0.47
TRIM25-202ENST00000537230 SLC35G5Q96KT7 338 aa12.11□□□□□ -0.47
TRIM25-202ENST00000537230 GPA33Q99795 319 aa12.11□□□□□ -0.47
TRIM25-202ENST00000537230 TAPBPLQ9BX59 468 aa12.11□□□□□ -0.47
TRIM25-202ENST00000537230 MMP28Q9H239 520 aa12.11□□□□□ -0.47
TRIM25-202ENST00000537230 SNTG1Q9NSN8 517 aa12.11□□□□□ -0.47
TRIM25-202ENST00000537230 TAS2R7Q9NYW3 318 aa12.11□□□□□ -0.47
TRIM25-202ENST00000537230 SLC17A4Q9Y2C5 497 aa12.11□□□□□ -0.47
TRIM25-202ENST00000537230 V9GYH0 126 aa12.11□□□□□ -0.47
TRIM25-202ENST00000537230 CENPXA8MT69 81 aa12.11□□□□□ -0.47
TRIM25-202ENST00000537230 NR2F1P10589 423 aa12.11□□□□□ -0.47
TRIM25-202ENST00000537230 HIST1H1TP22492 207 aaPredicted RBP12.11□□□□□ -0.47
TRIM25-202ENST00000537230 AK4P27144 223 aaPredicted RBP12.11□□□□□ -0.47
TRIM25-202ENST00000537230 DAB2P98082 770 aa12.11□□□□□ -0.47
TRIM25-202ENST00000537230 ZIC1Q15915 447 aa12.11□□□□□ -0.47
TRIM25-202ENST00000537230 TBRG1Q3YBR2 411 aa12.11□□□□□ -0.47
TRIM25-202ENST00000537230 TMEM196Q5HYL7 178 aa12.11□□□□□ -0.47
TRIM25-202ENST00000537230 PLAG1Q6DJT9 500 aa12.11□□□□□ -0.47
TRIM25-202ENST00000537230 PGBD2Q6P3X8 592 aa12.11□□□□□ -0.47
TRIM25-202ENST00000537230 ABHD17CQ6PCB6 329 aa12.11□□□□□ -0.47
TRIM25-202ENST00000537230 TMEM107Q6UX40 140 aa12.11□□□□□ -0.47
TRIM25-202ENST00000537230 SLC30A8Q8IWU4 369 aa12.11□□□□□ -0.47
TRIM25-202ENST00000537230 TBC1D19Q8N5T2 526 aa12.11□□□□□ -0.47
TRIM25-202ENST00000537230 OR6T1Q8NGN1 323 aa12.11□□□□□ -0.47
TRIM25-202ENST00000537230 OR2L8Q8NGY9 312 aa12.11□□□□□ -0.47
TRIM25-202ENST00000537230 C9orf43Q8TAL5 461 aaPredicted RBP12.11□□□□□ -0.47
TRIM25-202ENST00000537230 SNX18Q96RF0 628 aa12.11□□□□□ -0.47
TRIM25-202ENST00000537230 PHOX2BQ99453 314 aa12.11□□□□□ -0.47
TRIM25-202ENST00000537230 MAPKAP1Q9BPZ7 522 aa12.11□□□□□ -0.47
TRIM25-202ENST00000537230 C6orf106Q9H6K1 298 aaPredicted RBP12.11□□□□□ -0.47
TRIM25-202ENST00000537230 NPAP1Q9NZP6 1156 aa12.11□□□□□ -0.47
TRIM25-202ENST00000537230 CRNNQ9UBG3 495 aaPredicted RBP12.11□□□□□ -0.47
TRIM25-202ENST00000537230 APOBEC3BQ9UH17 382 aaKnown RBP12.11□□□□□ -0.47
TRIM25-202ENST00000537230 SPTBP11277 2137 aa12.11□□□□□ -0.47
TRIM25-202ENST00000537230 TRBV23OR9-2A0A075B6M9 112 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 H3BN98 237 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 FRS3O43559 492 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 AIFM1O95831 613 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 TP53P04637 393 aaPredicted RBP12.1□□□□□ -0.47
TRIM25-202ENST00000537230 H1F0P07305 194 aaKnown RBP12.1□□□□□ -0.47
TRIM25-202ENST00000537230 RPS21P63220 83 aaKnown RBP12.1□□□□□ -0.47
TRIM25-202ENST00000537230 MXD1Q05195 221 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 RPE65Q16518 533 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 TMEM31Q5JXX7 168 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 DCST1Q5T197 706 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 TMPRSS11AQ6ZMR5 421 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 GALNT12Q8IXK2 581 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 CCL4L1Q8NHW4 92 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 SLC6A18Q96N87 628 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 DEPDC7Q96QD5 511 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 BBS4Q96RK4 519 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 TMEM246Q9BRR3 403 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 TIMM29Q9BSF4 260 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 UCK2Q9BZX2 261 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 MAN2C1Q9NTJ4 1040 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 PAQR5Q9NXK6 330 aaPredicted RBP12.1□□□□□ -0.47
TRIM25-202ENST00000537230 TBC1D29Q9UFV1 150 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 ADAM29Q9UKF5 820 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 RABL2BQ9UNT1 228 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 A0A075B6Q4 140 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 TBC1D3DA0A087WVF3 549 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 TBC1D3IA0A087WXS9 549 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 TBC1D3EA0A087X179 549 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 TBC1D3KA0A087X1G2 549 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 A0A1W2PQ09 198 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 TBC1D3FA6NER0 549 aaPredicted RBP12.1□□□□□ -0.47
TRIM25-202ENST00000537230 TBC1D3LB9A6J9 549 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 RNGTTO60942 597 aaKnown RBP12.1□□□□□ -0.47
TRIM25-202ENST00000537230 TBC1D3HP0C7X1 549 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 COL9A1P20849 921 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 ATP5A1P25705 553 aaKnown RBP12.1□□□□□ -0.47
TRIM25-202ENST00000537230 ADPRHP54922 357 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 TARDBPQ13148 414 aaKnown RBP eCLIP12.1□□□□□ -0.472e-9■■■■□ 23.6
TRIM25-202ENST00000537230 SLC9A5Q14940 896 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 SHHQ15465 462 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 ITPRIPL2Q3MIP1 535 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 TBC1D3GQ6DHY5 549 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 TBC1D3CQ6IPX1 549 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 RAB43Q86YS6 212 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 PEX5LQ8IYB4 626 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 TBC1D3Q8IZP1 549 aaPredicted RBP12.1□□□□□ -0.47
TRIM25-202ENST00000537230 KCT2Q8NC54 265 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 FLCNQ8NFG4 579 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 OR4E2Q8NGC2 313 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 FUZQ9BT04 418 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 APOOQ9BUR5 198 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 BEX2Q9BXY8 128 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 EQTNQ9NQ60 294 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 P2RX2Q9UBL9 471 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 TMCC3Q9ULS5 477 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 TRAPPC4Q9Y296 219 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 MEIOCA2RUB1 952 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 ARRDC5A6NEK1 342 aa12.1□□□□□ -0.47
TRIM25-202ENST00000537230 TLR4O00206 839 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms