RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 ZPLD1Q8TCW7 415 aa17.93■□□□□ 0.46
TNFRSF1B-204ENST00000536782 CNRIP1Q96F85 164 aaPredicted RBP17.93■□□□□ 0.46
TNFRSF1B-204ENST00000536782 GALNT9Q9HCQ5 603 aa17.93■□□□□ 0.46
TNFRSF1B-204ENST00000536782 EHD3Q9NZN3 535 aa17.93■□□□□ 0.46
TNFRSF1B-204ENST00000536782 VPS29Q9UBQ0 182 aa17.93■□□□□ 0.46
TNFRSF1B-204ENST00000536782 TRPS1Q9UHF7 1281 aa17.93■□□□□ 0.46
TNFRSF1B-204ENST00000536782 ZNF180Q9UJW8 692 aa17.93■□□□□ 0.46
TNFRSF1B-204ENST00000536782 MAPRE3Q9UPY8 281 aa17.93■□□□□ 0.46
TNFRSF1B-204ENST00000536782 EXO1Q9UQ84 846 aaKnown RBP17.93■□□□□ 0.46
TNFRSF1B-204ENST00000536782 PLEKHA6Q9Y2H5 1048 aa17.93■□□□□ 0.46
TNFRSF1B-204ENST00000536782 EEF1E1-BLOC1S5C9J1V9 151 aa17.92■□□□□ 0.46
TNFRSF1B-204ENST00000536782 EEF1E1O43324 174 aaKnown RBP17.92■□□□□ 0.46
TNFRSF1B-204ENST00000536782 UGT2B11O75310 529 aa17.92■□□□□ 0.46
TNFRSF1B-204ENST00000536782 CBR3O75828 277 aa17.92■□□□□ 0.46
TNFRSF1B-204ENST00000536782 OR4F21O95013 312 aa17.92■□□□□ 0.46
TNFRSF1B-204ENST00000536782 SBK3P0C264 359 aa17.92■□□□□ 0.46
TNFRSF1B-204ENST00000536782 EPXP11678 715 aa17.92■□□□□ 0.46
TNFRSF1B-204ENST00000536782 CPN1P15169 458 aa17.92■□□□□ 0.46
TNFRSF1B-204ENST00000536782 SOX18P35713 384 aa17.92■□□□□ 0.46
TNFRSF1B-204ENST00000536782 DUSP2Q05923 314 aa17.92■□□□□ 0.46
TNFRSF1B-204ENST00000536782 LTB4RQ15722 352 aa17.92■□□□□ 0.46
TNFRSF1B-204ENST00000536782 FBXW10Q5XX13 1052 aa17.92■□□□□ 0.46
TNFRSF1B-204ENST00000536782 FAM180BQ6P0A1 224 aa17.92■□□□□ 0.46
TNFRSF1B-204ENST00000536782 TMEM151AQ8N4L1 468 aa17.92■□□□□ 0.46
TNFRSF1B-204ENST00000536782 MMGT1Q8N4V1 131 aa17.92■□□□□ 0.46
TNFRSF1B-204ENST00000536782 OR14L1PQ8NHC6 308 aa17.92■□□□□ 0.46
TNFRSF1B-204ENST00000536782 DCAKDQ8WVC6 231 aa17.92■□□□□ 0.46
TNFRSF1B-204ENST00000536782 TMCO6Q96DC7 493 aa17.92■□□□□ 0.46
TNFRSF1B-204ENST00000536782 ZNF681Q96N22 645 aa17.92■□□□□ 0.46
TNFRSF1B-204ENST00000536782 HBEGFQ99075 208 aa17.92■□□□□ 0.46
TNFRSF1B-204ENST00000536782 SERHLQ9NQF3 203 aa17.92■□□□□ 0.46
TNFRSF1B-204ENST00000536782 ZNF225Q9UK10 706 aa17.92■□□□□ 0.46
TNFRSF1B-204ENST00000536782 UTS2RQ9UKP6 389 aa17.92■□□□□ 0.46
TNFRSF1B-204ENST00000536782 PRAMEF25A6NGN4 478 aa17.91■□□□□ 0.46
TNFRSF1B-204ENST00000536782 FRG2CA6NGY1 282 aa17.91■□□□□ 0.46
TNFRSF1B-204ENST00000536782 TO15178 435 aa17.91■□□□□ 0.46
TNFRSF1B-204ENST00000536782 ESRRBO95718 433 aa17.91■□□□□ 0.46
TNFRSF1B-204ENST00000536782 TMIGD3P0DMS9 266 aaPredicted RBP17.91■□□□□ 0.46
TNFRSF1B-204ENST00000536782 HSD3B1P14060 373 aa17.91■□□□□ 0.46
TNFRSF1B-204ENST00000536782 PCSK2P16519 638 aa17.91■□□□□ 0.46
TNFRSF1B-204ENST00000536782 KLK2P20151 261 aa17.91■□□□□ 0.46
TNFRSF1B-204ENST00000536782 HSD3B2P26439 372 aa17.91■□□□□ 0.46
TNFRSF1B-204ENST00000536782 EMDP50402 254 aa17.91■□□□□ 0.46
TNFRSF1B-204ENST00000536782 DGKQP52824 942 aa17.91■□□□□ 0.46
TNFRSF1B-204ENST00000536782 MRPS35P82673 323 aaKnown RBP17.91■□□□□ 0.46
TNFRSF1B-204ENST00000536782 SORDQ00796 357 aa17.91■□□□□ 0.46
TNFRSF1B-204ENST00000536782 CLCQ05315 142 aa17.91■□□□□ 0.46
TNFRSF1B-204ENST00000536782 TEX35Q5T0J7 233 aa17.91■□□□□ 0.46
TNFRSF1B-204ENST00000536782 ENPP6Q6UWR7 440 aa17.91■□□□□ 0.46
TNFRSF1B-204ENST00000536782 WDSUB1Q8N9V3 476 aa17.91■□□□□ 0.46
TNFRSF1B-204ENST00000536782 C9orf106Q8NAJ2 232 aa17.91■□□□□ 0.46
TNFRSF1B-204ENST00000536782 KIF18AQ8NI77 898 aa17.91■□□□□ 0.46
TNFRSF1B-204ENST00000536782 IFT81Q8WYA0 676 aa17.91■□□□□ 0.46
TNFRSF1B-204ENST00000536782 POM121Q96HA1 1249 aa17.91■□□□□ 0.46
TNFRSF1B-204ENST00000536782 ALPK1Q96QP1 1244 aa17.91■□□□□ 0.46
TNFRSF1B-204ENST00000536782 FMO2Q99518 471 aa17.91■□□□□ 0.46
TNFRSF1B-204ENST00000536782 OR2B2Q9GZK3 357 aa17.91■□□□□ 0.46
TNFRSF1B-204ENST00000536782 PFDN4Q9NQP4 134 aa17.91■□□□□ 0.46
TNFRSF1B-204ENST00000536782 JKAMPQ9P055 326 aa17.91■□□□□ 0.46
TNFRSF1B-204ENST00000536782 DMGDHQ9UI17 866 aaKnown RBP17.91■□□□□ 0.46
TNFRSF1B-204ENST00000536782 GPR55Q9Y2T6 319 aaPredicted RBP17.91■□□□□ 0.46
TNFRSF1B-204ENST00000536782 H0Y3Z8 333 aa17.9■□□□□ 0.46
TNFRSF1B-204ENST00000536782 MANBAO00462 879 aa17.9■□□□□ 0.46
TNFRSF1B-204ENST00000536782 REM1O75628 298 aa17.9■□□□□ 0.46
TNFRSF1B-204ENST00000536782 BCAS2O75934 225 aaPredicted RBP17.9■□□□□ 0.46
TNFRSF1B-204ENST00000536782 KRT6AP02538 564 aa17.9■□□□□ 0.46
TNFRSF1B-204ENST00000536782 KRT6BP04259 564 aa17.9■□□□□ 0.46
TNFRSF1B-204ENST00000536782 SNRPAP09012 282 aaKnown RBP17.9■□□□□ 0.46
TNFRSF1B-204ENST00000536782 HSD17B3P37058 310 aa17.9■□□□□ 0.46
TNFRSF1B-204ENST00000536782 SLCO1A2P46721 670 aa17.9■□□□□ 0.46
TNFRSF1B-204ENST00000536782 KRT6CP48668 564 aa17.9■□□□□ 0.46
TNFRSF1B-204ENST00000536782 FAM219BQ5XKK7 198 aa17.9■□□□□ 0.46
TNFRSF1B-204ENST00000536782 CAMKMTQ7Z624 323 aa17.9■□□□□ 0.46
TNFRSF1B-204ENST00000536782 TRIM42Q8IWZ5 723 aa17.9■□□□□ 0.46
TNFRSF1B-204ENST00000536782 CDYL2Q8N8U2 506 aa17.9■□□□□ 0.46
TNFRSF1B-204ENST00000536782 UHMK1Q8TAS1 419 aaKnown RBP17.9■□□□□ 0.46
TNFRSF1B-204ENST00000536782 LINC01560Q8TB33 94 aa17.9■□□□□ 0.46
TNFRSF1B-204ENST00000536782 RDH11Q8TC12 318 aa17.9■□□□□ 0.46
TNFRSF1B-204ENST00000536782 ZNF675Q8TD23 568 aa17.9■□□□□ 0.46
TNFRSF1B-204ENST00000536782 TMBIM1Q969X1 311 aa17.9■□□□□ 0.46
TNFRSF1B-204ENST00000536782 ZFP3Q96NJ6 502 aa17.9■□□□□ 0.46
TNFRSF1B-204ENST00000536782 COL21A1Q96P44 957 aa17.9■□□□□ 0.46
TNFRSF1B-204ENST00000536782 TM9SF2Q99805 663 aa17.9■□□□□ 0.46
TNFRSF1B-204ENST00000536782 TUBA1CQ9BQE3 449 aa17.9■□□□□ 0.46
TNFRSF1B-204ENST00000536782 HEY2Q9UBP5 337 aa17.9■□□□□ 0.46
TNFRSF1B-204ENST00000536782 MCM8Q9UJA3 840 aa17.9■□□□□ 0.46
TNFRSF1B-204ENST00000536782 A0A087WUV0 522 aaPredicted RBP17.89■□□□□ 0.45
TNFRSF1B-204ENST00000536782 OR6C70A6NIJ9 312 aa17.89■□□□□ 0.45
TNFRSF1B-204ENST00000536782 ABCB7O75027 752 aa17.89■□□□□ 0.45
TNFRSF1B-204ENST00000536782 ERN1O75460 977 aaKnown RBP17.89■□□□□ 0.45
TNFRSF1B-204ENST00000536782 SUPT7LO94864 414 aa17.89■□□□□ 0.45
TNFRSF1B-204ENST00000536782 CTAGE8P0CG41 777 aa17.89■□□□□ 0.45
TNFRSF1B-204ENST00000536782 DRD2P14416 443 aa17.89■□□□□ 0.45
TNFRSF1B-204ENST00000536782 TAC1P20366 129 aa17.89■□□□□ 0.45
TNFRSF1B-204ENST00000536782 HMGCS1Q01581 520 aa17.89■□□□□ 0.45
TNFRSF1B-204ENST00000536782 SRYQ05066 204 aa17.89■□□□□ 0.45
TNFRSF1B-204ENST00000536782 CSTF3Q12996 717 aaKnown RBP17.89■□□□□ 0.45
TNFRSF1B-204ENST00000536782 RASA2Q15283 850 aa17.89■□□□□ 0.45
TNFRSF1B-204ENST00000536782 ZNF628Q5EBL2 1059 aa17.89■□□□□ 0.45
TNFRSF1B-204ENST00000536782 TCHHL1Q5QJ38 904 aaPredicted RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms