RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 SMAD7O15105 426 aaKnown RBP11.78□□□□□ -0.52
TNFRSF1A-207ENST00000535958 ABCB7O75027 752 aa11.78□□□□□ -0.52
TNFRSF1A-207ENST00000535958 REM1O75628 298 aa11.78□□□□□ -0.52
TNFRSF1A-207ENST00000535958 ESRRBO95718 433 aa11.78□□□□□ -0.52
TNFRSF1A-207ENST00000535958 MTHFD2P13995 350 aa11.78□□□□□ -0.52
TNFRSF1A-207ENST00000535958 CSNK2A2P19784 350 aaPredicted RBP11.78□□□□□ -0.52
TNFRSF1A-207ENST00000535958 TCEA1P23193 301 aaKnown RBP11.78□□□□□ -0.52
TNFRSF1A-207ENST00000535958 PCSK6P29122 969 aa11.78□□□□□ -0.52
TNFRSF1A-207ENST00000535958 IL12BP29460 328 aa11.78□□□□□ -0.52
TNFRSF1A-207ENST00000535958 SRD5A2P31213 254 aa11.78□□□□□ -0.52
TNFRSF1A-207ENST00000535958 FEN1P39748 380 aaKnown RBP11.78□□□□□ -0.52
TNFRSF1A-207ENST00000535958 KCNJ5P48544 419 aa11.78□□□□□ -0.52
TNFRSF1A-207ENST00000535958 ALDH9A1P49189 494 aa11.78□□□□□ -0.52
TNFRSF1A-207ENST00000535958 GPX6P59796 221 aa11.78□□□□□ -0.52
TNFRSF1A-207ENST00000535958 EXOSC7Q15024 291 aaKnown RBP11.78□□□□□ -0.52
TNFRSF1A-207ENST00000535958 PRICKLE4Q2TBC4 344 aa11.78□□□□□ -0.52
TNFRSF1A-207ENST00000535958 MROH9Q5TGP6 573 aa11.78□□□□□ -0.52
TNFRSF1A-207ENST00000535958 SLC48A1Q6P1K1 146 aa11.78□□□□□ -0.52
TNFRSF1A-207ENST00000535958 PLCZ1Q86YW0 608 aa11.78□□□□□ -0.52
TNFRSF1A-207ENST00000535958 CENPLQ8N0S6 344 aaPredicted RBP11.78□□□□□ -0.52
TNFRSF1A-207ENST00000535958 GBP7Q8N8V2 638 aaPredicted RBP11.78□□□□□ -0.52
TNFRSF1A-207ENST00000535958 SIMC1Q8NDZ2 872 aa11.78□□□□□ -0.52
TNFRSF1A-207ENST00000535958 OR4K17Q8NGC6 315 aa11.78□□□□□ -0.52
TNFRSF1A-207ENST00000535958 OR52R1Q8NGF1 315 aa11.78□□□□□ -0.52
TNFRSF1A-207ENST00000535958 HGDQ93099 445 aa11.78□□□□□ -0.52
TNFRSF1A-207ENST00000535958 PIK3IP1Q96FE7 263 aa11.78□□□□□ -0.52
TNFRSF1A-207ENST00000535958 COX4I2Q96KJ9 171 aa11.78□□□□□ -0.52
TNFRSF1A-207ENST00000535958 COL21A1Q96P44 957 aa11.78□□□□□ -0.52
TNFRSF1A-207ENST00000535958 PIP5K1AQ99755 562 aa11.78□□□□□ -0.52
TNFRSF1A-207ENST00000535958 NMRK1Q9NWW6 199 aa11.78□□□□□ -0.52
TNFRSF1A-207ENST00000535958 MAT2BQ9NZL9 334 aa11.78□□□□□ -0.52
TNFRSF1A-207ENST00000535958 C6orf203Q9P0P8 240 aaPredicted RBP11.78□□□□□ -0.52
TNFRSF1A-207ENST00000535958 CLCF1Q9UBD9 225 aa11.78□□□□□ -0.52
TNFRSF1A-207ENST00000535958 SLC12A4Q9UP95 1085 aa11.78□□□□□ -0.52
TNFRSF1A-207ENST00000535958 PLLPQ9Y342 182 aa11.78□□□□□ -0.52
TNFRSF1A-207ENST00000535958 TESMINQ9Y4I5 508 aa11.78□□□□□ -0.52
TNFRSF1A-207ENST00000535958 WIF1Q9Y5W5 379 aa11.78□□□□□ -0.52
TNFRSF1A-207ENST00000535958 A0A096LPK6 155 aa11.77□□□□□ -0.53
TNFRSF1A-207ENST00000535958 A0A1W2PNV4 684 aa11.77□□□□□ -0.53
TNFRSF1A-207ENST00000535958 FRG2CA6NGY1 282 aa11.77□□□□□ -0.53
TNFRSF1A-207ENST00000535958 A8MXE2 369 aa11.77□□□□□ -0.53
TNFRSF1A-207ENST00000535958 MSTNO14793 375 aa11.77□□□□□ -0.53
TNFRSF1A-207ENST00000535958 SMIM24O75264 130 aa11.77□□□□□ -0.53
TNFRSF1A-207ENST00000535958 UGT2B11O75310 529 aa11.77□□□□□ -0.53
TNFRSF1A-207ENST00000535958 KLHL2O95198 593 aa11.77□□□□□ -0.53
TNFRSF1A-207ENST00000535958 SIX3O95343 332 aaPredicted RBP11.77□□□□□ -0.53
TNFRSF1A-207ENST00000535958 LY6G6DO95868 133 aa11.77□□□□□ -0.53
TNFRSF1A-207ENST00000535958 ATP1B1P05026 303 aa11.77□□□□□ -0.53
TNFRSF1A-207ENST00000535958 C2P06681 752 aa11.77□□□□□ -0.53
TNFRSF1A-207ENST00000535958 CRHP06850 196 aa11.77□□□□□ -0.53
TNFRSF1A-207ENST00000535958 TYK2P29597 1187 aa11.77□□□□□ -0.53
TNFRSF1A-207ENST00000535958 SOX18P35713 384 aa11.77□□□□□ -0.53
TNFRSF1A-207ENST00000535958 MAGEA4P43358 317 aa11.77□□□□□ -0.53
TNFRSF1A-207ENST00000535958 STARP49675 285 aa11.77□□□□□ -0.53
TNFRSF1A-207ENST00000535958 SERPINB8P50452 374 aa11.77□□□□□ -0.53
TNFRSF1A-207ENST00000535958 PLTPP55058 493 aa11.77□□□□□ -0.53
TNFRSF1A-207ENST00000535958 MAP4K2Q12851 820 aa11.77□□□□□ -0.53
TNFRSF1A-207ENST00000535958 EFR3AQ14156 821 aa11.77□□□□□ -0.53
TNFRSF1A-207ENST00000535958 ERCC6LQ2NKX8 1250 aa11.77□□□□□ -0.53
TNFRSF1A-207ENST00000535958 SGO1Q5FBB7 561 aa11.77□□□□□ -0.53
TNFRSF1A-207ENST00000535958 FAM111BQ6SJ93 734 aa11.77□□□□□ -0.53
TNFRSF1A-207ENST00000535958 YTHDF3Q7Z739 585 aaKnown RBP11.77□□□□□ -0.53
TNFRSF1A-207ENST00000535958 CXorf67Q86X51 503 aaPredicted RBP11.77□□□□□ -0.53
TNFRSF1A-207ENST00000535958 KRTAP1-3Q8IUG1 177 aa11.77□□□□□ -0.53
TNFRSF1A-207ENST00000535958 MEIOBQ8N635 442 aa11.77□□□□□ -0.53
TNFRSF1A-207ENST00000535958 PTGR2Q8N8N7 351 aaPredicted RBP11.77□□□□□ -0.53
TNFRSF1A-207ENST00000535958 PERPQ96FX8 193 aa11.77□□□□□ -0.53
TNFRSF1A-207ENST00000535958 UCN2Q96RP3 112 aa11.77□□□□□ -0.53
TNFRSF1A-207ENST00000535958 SLC39A3Q9BRY0 314 aa11.77□□□□□ -0.53
TNFRSF1A-207ENST00000535958 RAB17Q9H0T7 212 aa11.77□□□□□ -0.53
TNFRSF1A-207ENST00000535958 VPS11Q9H270 941 aa11.77□□□□□ -0.53
TNFRSF1A-207ENST00000535958 KLHL28Q9NXS3 571 aa11.77□□□□□ -0.53
TNFRSF1A-207ENST00000535958 SENP1Q9P0U3 644 aa11.77□□□□□ -0.53
TNFRSF1A-207ENST00000535958 TMCO1Q9UM00 188 aa11.77□□□□□ -0.53
TNFRSF1A-207ENST00000535958 DLGAP4Q9Y2H0 992 aa11.77□□□□□ -0.53
TNFRSF1A-207ENST00000535958 PCDHA9Q9Y5H5 950 aa11.77□□□□□ -0.53
TNFRSF1A-207ENST00000535958 NSD1Q96L73 2696 aaPredicted RBP11.77□□□□□ -0.53
TNFRSF1A-207ENST00000535958 OR6C70A6NIJ9 312 aa11.76□□□□□ -0.53
TNFRSF1A-207ENST00000535958 SLC22A20A6NK97 555 aa11.76□□□□□ -0.53
TNFRSF1A-207ENST00000535958 CTIFO43310 598 aaKnown RBP11.76□□□□□ -0.53
TNFRSF1A-207ENST00000535958 RAD51CO43502 376 aa11.76□□□□□ -0.53
TNFRSF1A-207ENST00000535958 BCAS2O75934 225 aaPredicted RBP11.76□□□□□ -0.53
TNFRSF1A-207ENST00000535958 POU2F1P14859 743 aa11.76□□□□□ -0.53
TNFRSF1A-207ENST00000535958 PHBP35232 272 aa11.76□□□□□ -0.53
TNFRSF1A-207ENST00000535958 CD79BP40259 229 aa11.76□□□□□ -0.53
TNFRSF1A-207ENST00000535958 PTGDSP41222 190 aa11.76□□□□□ -0.53
TNFRSF1A-207ENST00000535958 PPICP45877 212 aa11.76□□□□□ -0.53
TNFRSF1A-207ENST00000535958 LHX2P50458 406 aa11.76□□□□□ -0.53
TNFRSF1A-207ENST00000535958 GFRA1P56159 465 aa11.76□□□□□ -0.53
TNFRSF1A-207ENST00000535958 EEFSECP57772 596 aaKnown RBP11.76□□□□□ -0.53
TNFRSF1A-207ENST00000535958 SIRPAP78324 504 aa11.76□□□□□ -0.53
TNFRSF1A-207ENST00000535958 PSPHP78330 225 aa11.76□□□□□ -0.53
TNFRSF1A-207ENST00000535958 MRPS22P82650 360 aaKnown RBP11.76□□□□□ -0.53
TNFRSF1A-207ENST00000535958 HMGCS1Q01581 520 aa11.76□□□□□ -0.53
TNFRSF1A-207ENST00000535958 ACKR1Q16570 336 aa11.76□□□□□ -0.53
TNFRSF1A-207ENST00000535958 DESI1Q6ICB0 168 aa11.76□□□□□ -0.53
TNFRSF1A-207ENST00000535958 PLXDC2Q6UX71 529 aa11.76□□□□□ -0.53
TNFRSF1A-207ENST00000535958 C20orf204Q6ZNR8 217 aa11.76□□□□□ -0.53
TNFRSF1A-207ENST00000535958 COMMD6Q7Z4G1 85 aa11.76□□□□□ -0.53
TNFRSF1A-207ENST00000535958 ADGRE4PQ86SQ3 457 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms