RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 GSX2Q9BZM3 304 aa7.28□□□□□ -1.24
CHFR-211ENST00000535897 KLHL4Q9C0H6 718 aa7.28□□□□□ -1.24
CHFR-211ENST00000535897 CXorf56Q9H5V9 222 aa7.28□□□□□ -1.24
CHFR-211ENST00000535897 NMRAL1Q9HBL8 299 aa7.28□□□□□ -1.24
CHFR-211ENST00000535897 SMYD2Q9NRG4 433 aa7.28□□□□□ -1.24
CHFR-211ENST00000535897 ELOVL5Q9NYP7 299 aa7.28□□□□□ -1.24
CHFR-211ENST00000535897 DLGAP4Q9Y2H0 992 aa7.28□□□□□ -1.24
CHFR-211ENST00000535897 CHD3Q12873 2000 aaKnown RBP7.28□□□□□ -1.24
CHFR-211ENST00000535897 ROS1P08922 2347 aa7.28□□□□□ -1.24
CHFR-211ENST00000535897 HEATR5AQ86XA9 2040 aa7.27□□□□□ -1.25
CHFR-211ENST00000535897 SYCE1LA8MT33 242 aa7.27□□□□□ -1.25
CHFR-211ENST00000535897 EFCAB8A8MWE9 144 aa7.27□□□□□ -1.25
CHFR-211ENST00000535897 H0YIV9 168 aa7.27□□□□□ -1.25
CHFR-211ENST00000535897 ACOX3O15254 700 aa7.27□□□□□ -1.25
CHFR-211ENST00000535897 SEC14L5O43304 696 aa7.27□□□□□ -1.25
CHFR-211ENST00000535897 ABCB7O75027 752 aa7.27□□□□□ -1.25
CHFR-211ENST00000535897 ERAL1O75616 437 aaKnown RBP7.27□□□□□ -1.25
CHFR-211ENST00000535897 REM1O75628 298 aa7.27□□□□□ -1.25
CHFR-211ENST00000535897 SEC31AO94979 1220 aaKnown RBP7.27□□□□□ -1.25
CHFR-211ENST00000535897 CRHP06850 196 aa7.27□□□□□ -1.25
CHFR-211ENST00000535897 PORP16435 677 aaPredicted RBP7.27□□□□□ -1.25
CHFR-211ENST00000535897 DPP4P27487 766 aa7.27□□□□□ -1.25
CHFR-211ENST00000535897 SSTR1P30872 391 aa7.27□□□□□ -1.25
CHFR-211ENST00000535897 SRD5A2P31213 254 aa7.27□□□□□ -1.25
CHFR-211ENST00000535897 CCKARP32238 428 aa7.27□□□□□ -1.25
CHFR-211ENST00000535897 KRT20P35900 424 aa7.27□□□□□ -1.25
CHFR-211ENST00000535897 FEN1P39748 380 aaKnown RBP7.27□□□□□ -1.25
CHFR-211ENST00000535897 GP5P40197 560 aa7.27□□□□□ -1.25
CHFR-211ENST00000535897 PTGDSP41222 190 aa7.27□□□□□ -1.25
CHFR-211ENST00000535897 PIK3CGP48736 1102 aa7.27□□□□□ -1.25
CHFR-211ENST00000535897 ATP5J2P56134 94 aa7.27□□□□□ -1.25
CHFR-211ENST00000535897 CLDN18P56856 261 aa7.27□□□□□ -1.25
CHFR-211ENST00000535897 HMGCS1Q01581 520 aa7.27□□□□□ -1.25
CHFR-211ENST00000535897 VEZF1Q14119 521 aa7.27□□□□□ -1.25
CHFR-211ENST00000535897 ZKSCAN8Q15776 578 aaPredicted RBP7.27□□□□□ -1.25
CHFR-211ENST00000535897 PFKFB4Q16877 469 aa7.27□□□□□ -1.25
CHFR-211ENST00000535897 CCNYL2Q5T2Q4 361 aa7.27□□□□□ -1.25
CHFR-211ENST00000535897 HMBOX1Q6NT76 420 aa7.27□□□□□ -1.25
CHFR-211ENST00000535897 FAM111BQ6SJ93 734 aa7.27□□□□□ -1.25
CHFR-211ENST00000535897 BTLAQ7Z6A9 289 aa7.27□□□□□ -1.25
CHFR-211ENST00000535897 CMC1Q7Z7K0 106 aa7.27□□□□□ -1.25
CHFR-211ENST00000535897 ISCA2Q86U28 154 aa7.27□□□□□ -1.25
CHFR-211ENST00000535897 SLC35F6Q8N357 371 aa7.27□□□□□ -1.25
CHFR-211ENST00000535897 MEIOBQ8N635 442 aa7.27□□□□□ -1.25
CHFR-211ENST00000535897 MAPK1IP1LQ8NDC0 245 aa7.27□□□□□ -1.25
CHFR-211ENST00000535897 OR4K17Q8NGC6 315 aa7.27□□□□□ -1.25
CHFR-211ENST00000535897 UBTD2Q8WUN7 234 aa7.27□□□□□ -1.25
CHFR-211ENST00000535897 ATP6V1E2Q96A05 226 aa7.27□□□□□ -1.25
CHFR-211ENST00000535897 CTHRC1Q96CG8 243 aa7.27□□□□□ -1.25
CHFR-211ENST00000535897 COL21A1Q96P44 957 aa7.27□□□□□ -1.25
CHFR-211ENST00000535897 ATOH8Q96SQ7 321 aa7.27□□□□□ -1.25
CHFR-211ENST00000535897 SERPINI1Q99574 410 aa7.27□□□□□ -1.25
CHFR-211ENST00000535897 MCMBPQ9BTE3 642 aa7.27□□□□□ -1.25
CHFR-211ENST00000535897 IPPKQ9H8X2 491 aa7.27□□□□□ -1.25
CHFR-211ENST00000535897 FBXL2Q9UKC9 423 aa7.27□□□□□ -1.25
CHFR-211ENST00000535897 SNX12Q9UMY4 172 aa7.27□□□□□ -1.25
CHFR-211ENST00000535897 PLLPQ9Y342 182 aa7.27□□□□□ -1.25
CHFR-211ENST00000535897 RNF11Q9Y3C5 154 aa7.27□□□□□ -1.25
CHFR-211ENST00000535897 TSC22D4Q9Y3Q8 395 aa7.27□□□□□ -1.25
CHFR-211ENST00000535897 ANK3Q12955 4377 aaKnown RBP7.26□□□□□ -1.25
CHFR-211ENST00000535897 USF3Q68DE3 2245 aa7.26□□□□□ -1.25
CHFR-211ENST00000535897 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.26□□□□□ -1.25
CHFR-211ENST00000535897 TCRBV9S1A1TA0A576 114 aa7.26□□□□□ -1.25
CHFR-211ENST00000535897 RNF223E7ERA6 249 aa7.26□□□□□ -1.25
CHFR-211ENST00000535897 HCRTR2O43614 444 aa7.26□□□□□ -1.25
CHFR-211ENST00000535897 GUCY1B2O75343 617 aa7.26□□□□□ -1.25
CHFR-211ENST00000535897 CLDN9O95484 217 aa7.26□□□□□ -1.25
CHFR-211ENST00000535897 IFNA2P01563 188 aa7.26□□□□□ -1.25
CHFR-211ENST00000535897 KLK1P06870 262 aa7.26□□□□□ -1.25
CHFR-211ENST00000535897 LTA4HP09960 611 aaKnown RBP7.26□□□□□ -1.25
CHFR-211ENST00000535897 PEPDP12955 493 aa7.26□□□□□ -1.25
CHFR-211ENST00000535897 CSNK2A2P19784 350 aaPredicted RBP7.26□□□□□ -1.25
CHFR-211ENST00000535897 CRABP2P29373 138 aa7.26□□□□□ -1.25
CHFR-211ENST00000535897 IL12BP29460 328 aa7.26□□□□□ -1.25
CHFR-211ENST00000535897 SPRP35270 261 aaPredicted RBP7.26□□□□□ -1.25
CHFR-211ENST00000535897 ALDH9A1P49189 494 aa7.26□□□□□ -1.25
CHFR-211ENST00000535897 MAPK12P53778 367 aa7.26□□□□□ -1.25
CHFR-211ENST00000535897 EEFSECP57772 596 aaKnown RBP7.26□□□□□ -1.25
CHFR-211ENST00000535897 MRPS35P82673 323 aaKnown RBP7.26□□□□□ -1.25
CHFR-211ENST00000535897 DLG1Q12959 904 aa7.26□□□□□ -1.25
CHFR-211ENST00000535897 TNK1Q13470 666 aa7.26□□□□□ -1.25
CHFR-211ENST00000535897 GTF2H2Q13888 395 aa7.26□□□□□ -1.25
CHFR-211ENST00000535897 FGFBP1Q14512 234 aa7.26□□□□□ -1.25
CHFR-211ENST00000535897 PRICKLE4Q2TBC4 344 aa7.26□□□□□ -1.25
CHFR-211ENST00000535897 BEX5Q5H9J7 111 aa7.26□□□□□ -1.25
CHFR-211ENST00000535897 RAET1LQ5VY80 246 aa7.26□□□□□ -1.25
CHFR-211ENST00000535897 TTC19Q6DKK2 380 aaPredicted RBP7.26□□□□□ -1.25
CHFR-211ENST00000535897 ALKBH2Q6NS38 261 aa7.26□□□□□ -1.25
CHFR-211ENST00000535897 GTF2H2CQ6P1K8 395 aa7.26□□□□□ -1.25
CHFR-211ENST00000535897 TMEM81Q6P7N7 255 aa7.26□□□□□ -1.25
CHFR-211ENST00000535897 ZNF474Q6S9Z5 364 aaPredicted RBP7.26□□□□□ -1.25
CHFR-211ENST00000535897 ZNF704Q6ZNC4 412 aaPredicted RBP7.26□□□□□ -1.25
CHFR-211ENST00000535897 PAGE2Q7Z2X7 111 aa7.26□□□□□ -1.25
CHFR-211ENST00000535897 GOLGA7Q7Z5G4 137 aa7.26□□□□□ -1.25
CHFR-211ENST00000535897 PPM1NQ8N819 430 aa7.26□□□□□ -1.25
CHFR-211ENST00000535897 ZNF610Q8N9Z0 462 aa7.26□□□□□ -1.25
CHFR-211ENST00000535897 OR52R1Q8NGF1 315 aa7.26□□□□□ -1.25
CHFR-211ENST00000535897 FIG4Q92562 907 aa7.26□□□□□ -1.25
CHFR-211ENST00000535897 TMBIM1Q969X1 311 aa7.26□□□□□ -1.25
CHFR-211ENST00000535897 KLHL29Q96CT2 875 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms