RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 EPPINO95925 133 aa9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 KRT6AP02538 564 aa9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 KRT6BP04259 564 aa9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 GSTA1P08263 222 aa9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 CSNK2A2P19784 350 aaPredicted RBP9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 CEACAM8P31997 349 aaPredicted RBP9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 FEN1P39748 380 aaKnown RBP9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 KRT6CP48668 564 aa9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 TMED10P49755 219 aaKnown RBP9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 HTR6P50406 440 aa9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 CDK9P50750 372 aaKnown RBP9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 NRG3P56975 720 aa9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 NKX6-1P78426 367 aaPredicted RBP9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 SLC29A2Q14542 456 aa9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 EXOSC7Q15024 291 aaKnown RBP9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 TRMT12Q53H54 448 aaKnown RBP9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 TEX35Q5T0J7 233 aa9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 HLA-DQA1Q5Y7H0 255 aa9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 VASNQ6EMK4 673 aa9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 DESI1Q6ICB0 168 aa9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 GALNT18Q6P9A2 607 aa9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 POMZP3Q6PJE2 187 aa9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 SLC22A9Q8IVM8 553 aa9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 IFT20Q8IY31 132 aa9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 ULK2Q8IYT8 1036 aa9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 PRR22Q8IZ63 422 aa9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 CNPY4Q8N129 248 aa9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 CDYL2Q8N8U2 506 aa9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 ADCY4Q8NFM4 1077 aa9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 KIF18AQ8NI77 898 aa9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 HSPBAP1Q96EW2 488 aa9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 APIPQ96GX9 242 aa9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 LCORQ96JN0 433 aaPredicted RBP9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 GNRHR2Q96P88 292 aa9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 HBEGFQ99075 208 aa9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 TIMP4Q99727 224 aa9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 ITPAQ9BY32 194 aa9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 PRDM14Q9GZV8 571 aa9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 GSTO2Q9H4Y5 243 aa9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 CRIM1Q9NZV1 1036 aa9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 ADAM21Q9UKJ8 722 aa9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 PSME2Q9UL46 239 aa9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 EMCNQ9ULC0 261 aa9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 PLLPQ9Y342 182 aa9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 HRNRQ86YZ3 2850 aaPredicted RBP9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 MED12LQ86YW9 2145 aa9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 RNF212BA8MTL3 300 aa9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 KDM4EB2RXH2 506 aaPredicted RBP9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 G3V2L1 256 aa9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 UBFD1O14562 309 aaKnown RBP9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 SMAD7O15105 426 aaKnown RBP9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 ACOX3O15254 700 aa9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 CDH16O75309 829 aa9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 ULK1O75385 1050 aa9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 ESRRBO95718 433 aa9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 RHOXF2BP0C7M4 288 aa9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 PYGBP11216 843 aa9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 PCSK2P16519 638 aa9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 DRD5P21918 477 aa9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 GDF1P27539 372 aa9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 PTPN6P29350 595 aa9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 TIMP3P35625 211 aa9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 DEKP35659 375 aaKnown RBP9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 PPICP45877 212 aa9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 TRPC1P48995 793 aa9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 PKNOX1P55347 436 aa9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 DCAF7P61962 342 aa9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 RPP38P78345 283 aaKnown RBP9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 SNTA1Q13424 505 aa9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 LTB4RQ15722 352 aa9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 SLC25A35Q3KQZ1 300 aa9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 ZNF628Q5EBL2 1059 aa9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 TIGD3Q6B0B8 471 aa9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 FAM180BQ6P0A1 224 aa9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 GPRIN3Q6ZVF9 776 aa9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 NUP54Q7Z3B4 507 aa9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 WDR53Q7Z5U6 358 aaPredicted RBP9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 PACS2Q86VP3 889 aa9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 KRTAP1-3Q8IUG1 177 aa9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 CCDC116Q8IYX3 515 aa9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 GBP7Q8N8V2 638 aaPredicted RBP9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 OR52R1Q8NGF1 315 aa9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 METTL6Q8TCB7 284 aa9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 RNF138Q8WVD3 245 aa9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 KLHL29Q96CT2 875 aa9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 ERP27Q96DN0 273 aa9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 OMA1Q96E52 524 aa9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 JSRP1Q96MG2 331 aaPredicted RBP9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 NODALQ96S42 347 aa9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 FAIM2Q9BWQ8 316 aa9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 BRINP2Q9C0B6 783 aa9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 EXO5Q9H790 373 aa9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 PSMC3IPQ9P2W1 217 aaPredicted RBP9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 B4GALT7Q9UBV7 327 aa9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 PRODH2Q9UF12 536 aa9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 DCDC2Q9UHG0 476 aa9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 UTS2RQ9UKP6 389 aa9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 DLGAP4Q9Y2H0 992 aa9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 GPR55Q9Y2T6 319 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms