RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 FNDC11Q9BVV2 318 aa3.03□□□□□ -1.92
USP48-215ENST00000534705 GCOM2Q9BZD3 368 aaPredicted RBP3.03□□□□□ -1.92
USP48-215ENST00000534705 CCSER1Q9C0I3 900 aa3.03□□□□□ -1.92
USP48-215ENST00000534705 MIS12Q9H081 205 aa3.03□□□□□ -1.92
USP48-215ENST00000534705 TMEM117Q9H0C3 514 aa3.03□□□□□ -1.92
USP48-215ENST00000534705 POLR3FQ9H1D9 316 aaPredicted RBP3.03□□□□□ -1.92
USP48-215ENST00000534705 WNT5BQ9H1J7 359 aa3.03□□□□□ -1.92
USP48-215ENST00000534705 DPH5Q9H2P9 285 aa3.03□□□□□ -1.92
USP48-215ENST00000534705 FZD8Q9H461 694 aa3.03□□□□□ -1.92
USP48-215ENST00000534705 HAUS4Q9H6D7 363 aa3.03□□□□□ -1.92
USP48-215ENST00000534705 RNPEPL1Q9HAU8 725 aa3.03□□□□□ -1.92
USP48-215ENST00000534705 EQTNQ9NQ60 294 aa3.03□□□□□ -1.92
USP48-215ENST00000534705 SDR39U1Q9NRG7 319 aaPredicted RBP3.03□□□□□ -1.92
USP48-215ENST00000534705 FGF21Q9NSA1 209 aa3.03□□□□□ -1.92
USP48-215ENST00000534705 OSER1Q9NX31 292 aa3.03□□□□□ -1.92
USP48-215ENST00000534705 GDE1Q9NZC3 331 aa3.03□□□□□ -1.92
USP48-215ENST00000534705 LRWD1Q9UFC0 647 aa3.03□□□□□ -1.92
USP48-215ENST00000534705 GRID1Q9ULK0 1009 aa3.03□□□□□ -1.92
USP48-215ENST00000534705 FADS3Q9Y5Q0 445 aa3.03□□□□□ -1.92
USP48-215ENST00000534705 LIPGQ9Y5X9 500 aa3.03□□□□□ -1.92
USP48-215ENST00000534705 RNF215Q9Y6U7 377 aa3.03□□□□□ -1.92
USP48-215ENST00000534705 PLXND1Q9Y4D7 1925 aa3.03□□□□□ -1.92
USP48-215ENST00000534705 TNRC6BQ9UPQ9 1833 aaKnown RBP3.03□□□□□ -1.93
USP48-215ENST00000534705 USP34Q70CQ2 3546 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 DOCK9Q9BZ29 2069 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 ZDBF2Q9HCK1 2354 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 A0A087WV48 116 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 FEZF1A0PJY2 475 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 NDUFAF8A1L188 74 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 VPS37CA5D8V6 355 aaPredicted RBP3.02□□□□□ -1.93
USP48-215ENST00000534705 GOLGA6L4A6NEF3 574 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 SLC9B1P1A6NJY1 282 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 CCDC169A6NNP5 214 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 E9PBE3 544 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 H3BQV1 296 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 K7EPI3 171 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 FAM189A1O60320 539 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 SMPD2O60906 423 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 TRUB2O95900 331 aaKnown RBP3.02□□□□□ -1.93
USP48-215ENST00000534705 RAF1P04049 648 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 ALPPP05187 535 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 GPIP06744 558 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 HMBSP08397 361 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 DANCRP0C864 163 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 STAG3L1P0CL83 205 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 IGHV4-31P0DP07 118 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 ALPPL2P10696 532 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 UROSP10746 265 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 SFTPCP11686 197 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 PDGFRAP16234 1089 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 CCNA2P20248 432 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 S100A1P23297 94 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 CMA1P23946 247 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 MARCKSP29966 332 aaPredicted RBP3.02□□□□□ -1.93
USP48-215ENST00000534705 CDC25CP30307 473 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 AXLP30530 894 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 CTNNB1P35222 781 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 LONP1P36776 959 aaKnown RBP3.02□□□□□ -1.93
USP48-215ENST00000534705 ACAA2P42765 397 aaKnown RBP3.02□□□□□ -1.93
USP48-215ENST00000534705 NAMPTP43490 491 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 ASMTP46597 345 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 ATXN3P54252 364 aaPredicted RBP3.02□□□□□ -1.93
USP48-215ENST00000534705 YBEYP58557 167 aaPredicted RBP3.02□□□□□ -1.93
USP48-215ENST00000534705 B3GALT5-AS1P59052 145 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 RPL26P61254 145 aaKnown RBP3.02□□□□□ -1.93
USP48-215ENST00000534705 HNRNPDQ14103 355 aaKnown RBP3.02□□□□□ -1.93
USP48-215ENST00000534705 MXD4Q14582 209 aaPredicted RBP3.02□□□□□ -1.93
USP48-215ENST00000534705 MTF1Q14872 753 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 KARSQ15046 597 aaKnown RBP3.02□□□□□ -1.93
USP48-215ENST00000534705 RPS6KA1Q15418 735 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 SLC1A5Q15758 541 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 SNAPC1Q16533 368 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 KRTAP13-3Q3SY46 172 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 ZNF789Q5FWF6 425 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 TCEAL5Q5H9L2 206 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 ELFN2Q5R3F8 820 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 TMEM270Q6UE05 265 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 CD300LGQ6UXG3 332 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 RGS9BPQ6ZS82 235 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 CDR2LQ86X02 465 aaPredicted RBP3.02□□□□□ -1.93
USP48-215ENST00000534705 CCDC65Q8IXS2 484 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 SLC7A5P1Q8MH63 180 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 CLYBLQ8N0X4 340 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 SLC39A11Q8N1S5 342 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 BBS5Q8N3I7 341 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 ZNF843Q8N446 348 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 FBXO39Q8N4B4 442 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 MAPKAPK5-AS1Q8N8E1 139 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 NHLRC2Q8NBF2 726 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 LINC00301Q8NCQ3 95 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 CCDC197Q8NCU1 140 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 LPCAT1Q8NF37 534 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 VN1R2Q8NFZ6 395 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 OR2T11Q8NH01 316 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 FNDC8Q8TC99 324 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 ATL1Q8WXF7 558 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 SHC3Q92529 594 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 SUSD6Q92537 303 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 RAPGEF5Q92565 580 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 ANKRD9Q96BM1 317 aaPredicted RBP3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms