RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 BORCS5Q969J3 196 aa9.09□□□□□ -0.95
CHKA-207ENST00000533728 BMFQ96LC9 184 aa9.09□□□□□ -0.95
CHKA-207ENST00000533728 ZNF681Q96N22 645 aa9.09□□□□□ -0.95
CHKA-207ENST00000533728 SERINC2Q96SA4 455 aa9.09□□□□□ -0.95
CHKA-207ENST00000533728 TREX2Q9BQ50 279 aaPredicted RBP9.09□□□□□ -0.95
CHKA-207ENST00000533728 FUZQ9BT04 418 aa9.09□□□□□ -0.95
CHKA-207ENST00000533728 FUNDC2Q9BWH2 189 aa9.09□□□□□ -0.95
CHKA-207ENST00000533728 ABCG4Q9H172 646 aa9.09□□□□□ -0.95
CHKA-207ENST00000533728 OR51I1Q9H343 314 aa9.09□□□□□ -0.95
CHKA-207ENST00000533728 ANKRD19PQ9H560 264 aa9.09□□□□□ -0.95
CHKA-207ENST00000533728 XKR8Q9H6D3 395 aa9.09□□□□□ -0.95
CHKA-207ENST00000533728 EVA1AQ9H8M9 152 aa9.09□□□□□ -0.95
CHKA-207ENST00000533728 TRIM45Q9H8W5 580 aaPredicted RBP9.09□□□□□ -0.95
CHKA-207ENST00000533728 LMAN1LQ9HAT1 526 aa9.09□□□□□ -0.95
CHKA-207ENST00000533728 ACOT13Q9NPJ3 140 aa9.09□□□□□ -0.95
CHKA-207ENST00000533728 ZCCHC3Q9NUD5 404 aaKnown RBP9.09□□□□□ -0.95
CHKA-207ENST00000533728 POT1Q9NUX5 634 aa9.09□□□□□ -0.95
CHKA-207ENST00000533728 MS4A12Q9NXJ0 267 aa9.09□□□□□ -0.95
CHKA-207ENST00000533728 SCHIP1Q9P0W5 487 aaPredicted RBP9.09□□□□□ -0.95
CHKA-207ENST00000533728 ZNF624Q9P2J8 865 aaPredicted RBP9.09□□□□□ -0.95
CHKA-207ENST00000533728 ERVK-18Q9QC07 812 aa9.09□□□□□ -0.95
CHKA-207ENST00000533728 SEC14L3Q9UDX4 400 aa9.09□□□□□ -0.95
CHKA-207ENST00000533728 FTSJ1Q9UET6 329 aa9.09□□□□□ -0.95
CHKA-207ENST00000533728 TBC1D29Q9UFV1 150 aa9.09□□□□□ -0.95
CHKA-207ENST00000533728 MOSPD1Q9UJG1 213 aa9.09□□□□□ -0.95
CHKA-207ENST00000533728 SLC9A8Q9Y2E8 581 aa9.09□□□□□ -0.95
CHKA-207ENST00000533728 PLEKHM1Q9Y4G2 1056 aa9.09□□□□□ -0.95
CHKA-207ENST00000533728 TP53BP1Q12888 1972 aaPredicted RBP9.08□□□□□ -0.96
CHKA-207ENST00000533728 A0A1W2PPW3 197 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 A0A1W2PRQ8 180 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 GSAPA4D1B5 854 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 POM121BA6NF01 834 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 EFCAB10A6NFE3 127 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 DUXAA6NLW8 204 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 CLCA1A8K7I4 914 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 ISM1B1AKI9 464 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 KHNYNO15037 678 aaKnown RBP9.08□□□□□ -0.96
CHKA-207ENST00000533728 ZW10O43264 779 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 SH3BP5O60239 455 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 CLPXO76031 633 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 SOX30O94993 753 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 AIFM1O95831 613 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 LGI1O95970 557 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 MT-ND2P03891 347 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 CDK1P06493 297 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 SLC35G6P0C7Q6 338 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 NR2F6P10588 404 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 NR2F1P10589 423 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 CYP4B1P13584 511 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 OSMP13725 252 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 EPHA2P29317 976 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 MAT2AP31153 395 aaKnown RBP9.08□□□□□ -0.96
CHKA-207ENST00000533728 BUD31P41223 144 aaPredicted RBP9.08□□□□□ -0.96
CHKA-207ENST00000533728 OR1E2P47887 323 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 TPMTP51580 245 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 NCBP2P52298 156 aaKnown RBP eCLIP9.08□□□□□ -0.96
CHKA-207ENST00000533728 CRISP1P54107 249 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 EMP3P54852 163 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 SRP54P61011 504 aaKnown RBP9.08□□□□□ -0.96
CHKA-207ENST00000533728 SNRPGP62308 76 aaKnown RBP9.08□□□□□ -0.96
CHKA-207ENST00000533728 OLR1P78380 273 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 TP53BP2Q13625 1128 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 DGCR6Q14129 220 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 LAPTM4AQ15012 233 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 SUZ12Q15022 739 aaKnown RBP9.08□□□□□ -0.96
CHKA-207ENST00000533728 CTF1Q16619 201 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 FGD3Q5JSP0 725 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 TMEM201Q5SNT2 666 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 RNLSQ5VYX0 342 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 FRMPD2BQ6IN97 320 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 TCTN3Q6NUS6 607 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 TNFAIP8L2Q6P589 184 aaPredicted RBP9.08□□□□□ -0.96
CHKA-207ENST00000533728 VN1R4Q7Z5H5 301 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 ABI3BPQ7Z7G0 1075 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 RBM12BQ8IXT5 1001 aaKnown RBP9.08□□□□□ -0.96
CHKA-207ENST00000533728 AMER3Q8N944 861 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 TMEM145Q8NBT3 493 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 CAMKVQ8NCB2 501 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 TOR1AIP2Q8NFQ8 470 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 FAM81AQ8TBF8 368 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 TBC1D15Q8TC07 691 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 GPBAR1Q8TDU6 330 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 PMM1Q92871 262 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 WBP1Q96G27 269 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 VMP1Q96GC9 406 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 Q96MT0 163 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 COL21A1Q96P44 957 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 TRNT1Q96Q11 434 aaKnown RBP9.08□□□□□ -0.96
CHKA-207ENST00000533728 SRMSQ9H3Y6 488 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 SERHL2Q9H4I8 314 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 KLHL31Q9H511 634 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 LIN28AQ9H9Z2 209 aaKnown RBP9.08□□□□□ -0.96
CHKA-207ENST00000533728 NMNAT1Q9HAN9 279 aaPredicted RBP9.08□□□□□ -0.96
CHKA-207ENST00000533728 LYRM4Q9HD34 91 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 GPR27Q9NS67 375 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 SPHK1Q9NYA1 384 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 USP36Q9P275 1121 aaKnown RBP9.08□□□□□ -0.96
CHKA-207ENST00000533728 WARS2Q9UGM6 360 aaKnown RBP9.08□□□□□ -0.96
CHKA-207ENST00000533728 APOBEC3BQ9UH17 382 aaKnown RBP9.08□□□□□ -0.96
CHKA-207ENST00000533728 B3GNT3Q9Y2A9 372 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms