RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 THRSPQ92748 146 aa16.64■□□□□ 0.25
PHRF1-205ENST00000533464 MS4A4EQ96PG1 132 aa16.64■□□□□ 0.25
PHRF1-205ENST00000533464 CDCA3Q99618 268 aaPredicted RBP16.64■□□□□ 0.25
PHRF1-205ENST00000533464 PCDHGA8Q9Y5G5 932 aa16.64■□□□□ 0.25
PHRF1-205ENST00000533464 SLC19A2O60779 497 aa16.64■□□□□ 0.25
PHRF1-205ENST00000533464 MAZP56270 477 aaKnown RBP16.64■□□□□ 0.25
PHRF1-205ENST00000533464 Q6ZSR6 202 aa16.64■□□□□ 0.25
PHRF1-205ENST00000533464 TMEM151AQ8N4L1 468 aa16.64■□□□□ 0.25
PHRF1-205ENST00000533464 KCNN1Q92952 543 aa16.64■□□□□ 0.25
PHRF1-205ENST00000533464 SERINC2Q96SA4 455 aa16.64■□□□□ 0.25
PHRF1-205ENST00000533464 CNIH4Q9P003 139 aa16.64■□□□□ 0.25
PHRF1-205ENST00000533464 TRBV2A0A0J9YWF9 115 aa16.63■□□□□ 0.25
PHRF1-205ENST00000533464 PRKCAP17252 672 aa16.63■□□□□ 0.25
PHRF1-205ENST00000533464 ENDOUP21128 410 aaKnown RBP16.63■□□□□ 0.25
PHRF1-205ENST00000533464 PSMB5P28074 263 aa16.63■□□□□ 0.25
PHRF1-205ENST00000533464 GRPRP30550 384 aa16.63■□□□□ 0.25
PHRF1-205ENST00000533464 GPR149Q86SP6 731 aa16.63■□□□□ 0.25
PHRF1-205ENST00000533464 PNPLA2Q96AD5 504 aa16.63■□□□□ 0.25
PHRF1-205ENST00000533464 CLCC1Q96S66 551 aa16.63■□□□□ 0.25
PHRF1-205ENST00000533464 ZNF559Q9BR84 538 aa16.63■□□□□ 0.25
PHRF1-205ENST00000533464 DKKL1Q9UK85 242 aa16.63■□□□□ 0.25
PHRF1-205ENST00000533464 H3BQ06 376 aaPredicted RBP16.63■□□□□ 0.25
PHRF1-205ENST00000533464 IRF4Q15306 451 aa16.63■□□□□ 0.25
PHRF1-205ENST00000533464 ZNF791Q3KP31 576 aaPredicted RBP16.63■□□□□ 0.25
PHRF1-205ENST00000533464 ABCA11PQ4W5N1 156 aa16.63■□□□□ 0.25
PHRF1-205ENST00000533464 C1orf94Q6P1W5 598 aa16.63■□□□□ 0.25
PHRF1-205ENST00000533464 Q8N402 240 aa16.63■□□□□ 0.25
PHRF1-205ENST00000533464 PAPD5Q8NDF8 572 aaKnown RBP16.63■□□□□ 0.25
PHRF1-205ENST00000533464 RFT1Q96AA3 541 aa16.63■□□□□ 0.25
PHRF1-205ENST00000533464 ACTR10Q9NZ32 417 aa16.63■□□□□ 0.25
PHRF1-205ENST00000533464 PCDHGB2Q9Y5G2 931 aa16.63■□□□□ 0.25
PHRF1-205ENST00000533464 SH3PXD2BA1X283 911 aa16.63■□□□□ 0.25
PHRF1-205ENST00000533464 OR7A17O14581 309 aa16.63■□□□□ 0.25
PHRF1-205ENST00000533464 CDC40O60508 579 aaKnown RBP eCLIP16.63■□□□□ 0.25
PHRF1-205ENST00000533464 CLEC3AO75596 197 aa16.63■□□□□ 0.25
PHRF1-205ENST00000533464 SEMA3DO95025 777 aa16.63■□□□□ 0.25
PHRF1-205ENST00000533464 PROS1P07225 676 aa16.63■□□□□ 0.25
PHRF1-205ENST00000533464 STOMP27105 288 aa16.63■□□□□ 0.25
PHRF1-205ENST00000533464 GDI2P50395 445 aaKnown RBP16.63■□□□□ 0.25
PHRF1-205ENST00000533464 PUDPQ08623 228 aa16.63■□□□□ 0.25
PHRF1-205ENST00000533464 TRAM1Q15629 374 aa16.63■□□□□ 0.25
PHRF1-205ENST00000533464 C6orf132Q5T0Z8 1188 aa16.63■□□□□ 0.25
PHRF1-205ENST00000533464 CYP4V2Q6ZWL3 525 aaPredicted RBP16.63■□□□□ 0.25
PHRF1-205ENST00000533464 RTL10Q7L3V2 364 aa16.63■□□□□ 0.25
PHRF1-205ENST00000533464 FAM217AQ8IXS0 508 aa16.63■□□□□ 0.25
PHRF1-205ENST00000533464 ANKLE1Q8NAG6 615 aa16.63■□□□□ 0.25
PHRF1-205ENST00000533464 RPLP0P6Q8NHW5 317 aa16.63■□□□□ 0.25
PHRF1-205ENST00000533464 FNDC8Q8TC99 324 aa16.63■□□□□ 0.25
PHRF1-205ENST00000533464 TMEM41AQ96HV5 264 aa16.63■□□□□ 0.25
PHRF1-205ENST00000533464 POLE3Q9NRF9 147 aa16.63■□□□□ 0.25
PHRF1-205ENST00000533464 TP53I11O14683 189 aa16.63■□□□□ 0.25
PHRF1-205ENST00000533464 PGCP20142 388 aa16.63■□□□□ 0.25
PHRF1-205ENST00000533464 DRD1P21728 446 aa16.63■□□□□ 0.25
PHRF1-205ENST00000533464 CDKN2CP42773 168 aa16.63■□□□□ 0.25
PHRF1-205ENST00000533464 KEAP1Q14145 624 aa16.63■□□□□ 0.25
PHRF1-205ENST00000533464 Q6ZSR9 355 aa16.63■□□□□ 0.25
PHRF1-205ENST00000533464 PMM1Q92871 262 aa16.63■□□□□ 0.25
PHRF1-205ENST00000533464 GMPR2Q9P2T1 348 aaKnown RBP16.63■□□□□ 0.25
PHRF1-205ENST00000533464 A0A1W2PPL8 197 aa16.63■□□□□ 0.25
PHRF1-205ENST00000533464 A8MV72 311 aaPredicted RBP16.63■□□□□ 0.25
PHRF1-205ENST00000533464 UBFD1O14562 309 aaKnown RBP16.63■□□□□ 0.25
PHRF1-205ENST00000533464 MAP4K2Q12851 820 aa16.63■□□□□ 0.25
PHRF1-205ENST00000533464 MAD2L1BPQ15013 274 aaPredicted RBP16.63■□□□□ 0.25
PHRF1-205ENST00000533464 FAM189A2Q15884 450 aa16.63■□□□□ 0.25
PHRF1-205ENST00000533464 CDRT4Q8N9R6 151 aa16.63■□□□□ 0.25
PHRF1-205ENST00000533464 NAXEQ8NCW5 288 aa16.63■□□□□ 0.25
PHRF1-205ENST00000533464 WDR20Q8TBZ3 569 aa16.63■□□□□ 0.25
PHRF1-205ENST00000533464 TMEM30AQ9NV96 361 aa16.63■□□□□ 0.25
PHRF1-205ENST00000533464 ERVK13-1Q9NX77 482 aa16.63■□□□□ 0.25
PHRF1-205ENST00000533464 ENTPD2Q9Y5L3 495 aa16.63■□□□□ 0.25
PHRF1-205ENST00000533464 TMEM14AQ9Y6G1 99 aa16.63■□□□□ 0.25
PHRF1-205ENST00000533464 DDX60LQ5H9U9 1706 aaKnown RBP16.62■□□□□ 0.25
PHRF1-205ENST00000533464 NHSL1Q5SYE7 1610 aa16.62■□□□□ 0.25
PHRF1-205ENST00000533464 GABBR2O75899 941 aa16.62■□□□□ 0.25
PHRF1-205ENST00000533464 RLN2P04090 185 aa16.62■□□□□ 0.25
PHRF1-205ENST00000533464 RORAP35398 523 aa16.62■□□□□ 0.25
PHRF1-205ENST00000533464 SOX9P48436 509 aa16.62■□□□□ 0.25
PHRF1-205ENST00000533464 RAB2AP61019 212 aa16.62■□□□□ 0.25
PHRF1-205ENST00000533464 PLXDC1Q8IUK5 500 aa16.62■□□□□ 0.25
PHRF1-205ENST00000533464 PHOSPHO2Q8TCD6 241 aa16.62■□□□□ 0.25
PHRF1-205ENST00000533464 SAMD8Q96LT4 415 aa16.62■□□□□ 0.25
PHRF1-205ENST00000533464 NPLQ9BXD5 320 aaPredicted RBP16.62■□□□□ 0.25
PHRF1-205ENST00000533464 TBCCD1Q9NVR7 557 aa16.62■□□□□ 0.25
PHRF1-205ENST00000533464 USP22Q9UPT9 525 aa16.62■□□□□ 0.25
PHRF1-205ENST00000533464 ZNF181Q2M3W8 571 aa16.62■□□□□ 0.25
PHRF1-205ENST00000533464 OR2T11Q8NH01 316 aa16.62■□□□□ 0.25
PHRF1-205ENST00000533464 B3GAT2Q9NPZ5 323 aa16.62■□□□□ 0.25
PHRF1-205ENST00000533464 CUEDC1Q9NWM3 386 aaPredicted RBP16.62■□□□□ 0.25
PHRF1-205ENST00000533464 H3BMQ9 156 aa16.62■□□□□ 0.25
PHRF1-205ENST00000533464 M0R129 80 aa16.62■□□□□ 0.25
PHRF1-205ENST00000533464 ZNF217O75362 1048 aa16.62■□□□□ 0.25
PHRF1-205ENST00000533464 BCAS1O75363 584 aaPredicted RBP16.62■□□□□ 0.25
PHRF1-205ENST00000533464 HBA1P69905 142 aa16.62■□□□□ 0.25
PHRF1-205ENST00000533464 GK3PQ14409 553 aa16.62■□□□□ 0.25
PHRF1-205ENST00000533464 SLC5A12Q1EHB4 618 aa16.62■□□□□ 0.25
PHRF1-205ENST00000533464 TCTE1Q5JU00 501 aa16.62■□□□□ 0.25
PHRF1-205ENST00000533464 SBSNQ6UWP8 590 aa16.62■□□□□ 0.25
PHRF1-205ENST00000533464 ABHD11Q8NFV4 315 aa16.62■□□□□ 0.25
PHRF1-205ENST00000533464 COG8Q96MW5 612 aa16.62■□□□□ 0.25
PHRF1-205ENST00000533464 DKK3Q9UBP4 350 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms