RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 TMEM201Q5SNT2 666 aa10.7□□□□□ -0.7
PTPRK-221ENST00000532331 HMBOX1Q6NT76 420 aa10.7□□□□□ -0.7
PTPRK-221ENST00000532331 SLC27A4Q6P1M0 643 aa10.7□□□□□ -0.7
PTPRK-221ENST00000532331 ASB18Q6ZVZ8 466 aa10.7□□□□□ -0.7
PTPRK-221ENST00000532331 ZADH2Q8N4Q0 377 aa10.7□□□□□ -0.7
PTPRK-221ENST00000532331 ZFPM2Q8WW38 1151 aa10.7□□□□□ -0.7
PTPRK-221ENST00000532331 NSMAFQ92636 917 aa10.7□□□□□ -0.7
PTPRK-221ENST00000532331 HS6ST2Q96MM7 605 aa10.7□□□□□ -0.7
PTPRK-221ENST00000532331 CTRCQ99895 268 aa10.7□□□□□ -0.7
PTPRK-221ENST00000532331 FGF21Q9NSA1 209 aa10.7□□□□□ -0.7
PTPRK-221ENST00000532331 MTMR10Q9NXD2 777 aa10.7□□□□□ -0.7
PTPRK-221ENST00000532331 RPH3AQ9Y2J0 694 aaPredicted RBP10.7□□□□□ -0.7
PTPRK-221ENST00000532331 SSC5DA1L4H1 1573 aa10.7□□□□□ -0.7
PTPRK-221ENST00000532331 TNFRSF10CO14798 259 aa10.7□□□□□ -0.7
PTPRK-221ENST00000532331 IRF2P14316 349 aa10.7□□□□□ -0.7
PTPRK-221ENST00000532331 PTNP21246 168 aa10.7□□□□□ -0.7
PTPRK-221ENST00000532331 KDELR2P33947 212 aa10.7□□□□□ -0.7
PTPRK-221ENST00000532331 ZNF613Q6PF04 617 aa10.7□□□□□ -0.7
PTPRK-221ENST00000532331 ZNF773Q6PK81 442 aa10.7□□□□□ -0.7
PTPRK-221ENST00000532331 PSD4Q8NDX1 1056 aa10.7□□□□□ -0.7
PTPRK-221ENST00000532331 OR8H1Q8NGG4 311 aa10.7□□□□□ -0.7
PTPRK-221ENST00000532331 OR6N2Q8NGY6 317 aa10.7□□□□□ -0.7
PTPRK-221ENST00000532331 NEIL2Q969S2 332 aa10.7□□□□□ -0.7
PTPRK-221ENST00000532331 ACTRT3Q9BYD9 372 aa10.7□□□□□ -0.7
PTPRK-221ENST00000532331 PCDHGB6Q9Y5F9 930 aa10.7□□□□□ -0.7
PTPRK-221ENST00000532331 PRSS21Q9Y6M0 314 aa10.7□□□□□ -0.7
PTPRK-221ENST00000532331 PMF1-BGLAPU3KQ54 211 aa10.7□□□□□ -0.7
PTPRK-221ENST00000532331 FTCDNL1E5RQL4 147 aa10.7□□□□□ -0.7
PTPRK-221ENST00000532331 PLOD2O00469 737 aa10.7□□□□□ -0.7
PTPRK-221ENST00000532331 TFF2Q03403 129 aa10.7□□□□□ -0.7
PTPRK-221ENST00000532331 MAD2L1BPQ15013 274 aaPredicted RBP10.7□□□□□ -0.7
PTPRK-221ENST00000532331 COL13A1Q5TAT6 717 aaPredicted RBP10.7□□□□□ -0.7
PTPRK-221ENST00000532331 PRAMEF17Q5VTA0 474 aa10.7□□□□□ -0.7
PTPRK-221ENST00000532331 TUBA3EQ6PEY2 450 aa10.7□□□□□ -0.7
PTPRK-221ENST00000532331 BLOC1S3Q6QNY0 202 aa10.7□□□□□ -0.7
PTPRK-221ENST00000532331 PLEKHG7Q6ZR37 379 aa10.7□□□□□ -0.7
PTPRK-221ENST00000532331 VWA5B2Q8N398 1253 aa10.7□□□□□ -0.7
PTPRK-221ENST00000532331 OR2T33Q8NG76 320 aa10.7□□□□□ -0.7
PTPRK-221ENST00000532331 RNF6Q9Y252 685 aa10.7□□□□□ -0.7
PTPRK-221ENST00000532331 PTGDR2Q9Y5Y4 395 aa10.7□□□□□ -0.7
PTPRK-221ENST00000532331 TLCD2A6NGC4 264 aa10.7□□□□□ -0.7
PTPRK-221ENST00000532331 HTRA2O43464 458 aaPredicted RBP10.7□□□□□ -0.7
PTPRK-221ENST00000532331 GJB3O75712 270 aa10.7□□□□□ -0.7
PTPRK-221ENST00000532331 KDM4BO94953 1096 aa10.7□□□□□ -0.7
PTPRK-221ENST00000532331 ODF4Q2M2E3 257 aa10.7□□□□□ -0.7
PTPRK-221ENST00000532331 C6orf132Q5T0Z8 1188 aa10.7□□□□□ -0.7
PTPRK-221ENST00000532331 ESX1Q8N693 406 aa10.7□□□□□ -0.7
PTPRK-221ENST00000532331 CCDC74AQ96AQ1 378 aa10.7□□□□□ -0.7
PTPRK-221ENST00000532331 ERMAPQ96PL5 475 aaPredicted RBP10.7□□□□□ -0.7
PTPRK-221ENST00000532331 ZCWPW2A0A1B0GU75 182 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 CLPXO76031 633 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 ITIH1P19827 911 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 EIF5AP63241 154 aaKnown RBP10.69□□□□□ -0.7
PTPRK-221ENST00000532331 SEC23BQ15437 767 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 OCLNQ16625 522 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 CES4AQ5XG92 561 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 PRR22Q8IZ63 422 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 MINDY1Q8N5J2 469 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 ARFGAP1Q8N6T3 406 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 OR7G3Q8NG95 312 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 FRS2Q8WU20 508 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 TBC1D20Q96BZ9 403 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 SLC45A3Q96JT2 553 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 FRMD6Q96NE9 622 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 CHIAQ9BZP6 476 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 BRF2Q9HAW0 419 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 PCTPQ9UKL6 214 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 ERVK-19Q9WJR5 959 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 PRRT4C9JH25 899 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 H0YAE9 185 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 ARHGEF15O94989 841 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 POU3F2P20265 443 aaPredicted RBP10.69□□□□□ -0.7
PTPRK-221ENST00000532331 AOAHP28039 575 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 PGGT1BP53609 377 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 ECH1Q13011 328 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 MPP2Q14168 576 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 CLCA4Q14CN2 919 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 KCTD18Q6PI47 426 aaPredicted RBP10.69□□□□□ -0.7
PTPRK-221ENST00000532331 HACD2Q6Y1H2 254 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 ACOT4Q8N9L9 421 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 TAMM41Q96BW9 452 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 MRGPRX1Q96LB2 322 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 MS4A4EQ96PG1 132 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 EHD1Q9H4M9 534 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 DMRT3Q9NQL9 472 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 C1GALT1Q9NS00 363 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 KCMF1Q9P0J7 381 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 CDH10Q9Y6N8 788 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 IFNA21P01568 189 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 IL9P15248 144 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 SLC5A2P31639 672 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 RBM34P42696 430 aaKnown RBP10.69□□□□□ -0.7
PTPRK-221ENST00000532331 EXOC3L2Q2M3D2 409 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 SLC36A3Q495N2 470 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 SFT2D3Q587I9 215 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 MSANTD1Q6ZTZ1 278 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 ISCA2Q86U28 154 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 PLPP6Q8IY26 295 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 CDRT4Q8N9R6 151 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 OR51G2Q8NGK0 314 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms