RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 SDHBP21912 280 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 AVPR2P30518 371 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 FMO3P31513 532 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 MNDAP41218 407 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 RBBP4Q09028 425 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 MYBPC3Q14896 1274 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 GTF2IRD2BQ6EKJ0 949 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 GUSBP11Q6P575 273 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 RASSF6Q6ZTQ3 369 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 HDDC2Q7Z4H3 204 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 TECPR1Q7Z6L1 1165 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 GTF2IRD2Q86UP8 949 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 LINC00471Q8N535 108 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 SIRT6Q8N6T7 355 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 ZNF283Q8N7M2 679 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 OR6N2Q8NGY6 317 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 NSMAFQ92636 917 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 OMA1Q96E52 524 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 NPLQ9BXD5 320 aaPredicted RBP7.51□□□□□ -1.21
CTNND1-230ENST00000532245 MCTS1Q9ULC4 181 aaKnown RBP7.51□□□□□ -1.21
CTNND1-230ENST00000532245 PRAMEF33A0A0G2JMD5 474 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 GABRR3A8MPY1 467 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 KHDRBS3O75525 346 aaKnown RBP7.5□□□□□ -1.21
CTNND1-230ENST00000532245 RBMXL2O75526 392 aaKnown RBP7.5□□□□□ -1.21
CTNND1-230ENST00000532245 EEDO75530 441 aaKnown RBP7.5□□□□□ -1.21
CTNND1-230ENST00000532245 ANXA2P07355 339 aaKnown RBP7.5□□□□□ -1.21
CTNND1-230ENST00000532245 ZNF43P17038 809 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 CAPGP40121 348 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 CSNK1G2P78368 415 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 PPP2R2BQ00005 443 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 DCST2Q5T1A1 773 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 LIX1LQ8IVB5 337 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 NAGSQ8N159 534 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 SGTBQ96EQ0 304 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 TRAPPC9Q96Q05 1148 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 LYSMD1Q96S90 227 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 PCDHGB5Q9Y5G0 923 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 ANXA2P2A6NMY6 339 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 ALOX12BO75342 701 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 H6PDO95479 791 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 TACSTD2P09758 323 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 ST6GAL1P15907 406 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 HK1P19367 917 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 CCNIQ14094 377 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 KLHL22Q53GT1 634 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 TMEM201Q5SNT2 666 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 C18orf63Q68DL7 685 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 HMBOX1Q6NT76 420 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 METTL2BQ6P1Q9 378 aaKnown RBP7.5□□□□□ -1.21
CTNND1-230ENST00000532245 SLCO4C1Q6ZQN7 724 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 ZBTB46Q86UZ6 589 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 ZSWIM9Q86XI8 627 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 OR52N2Q8NGI0 321 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 GNPDA2Q8TDQ7 276 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 FRS2Q8WU20 508 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 NR4A3Q92570 626 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 TCEAL3Q969E4 200 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 EGLN2Q96KS0 407 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 ZNF559Q9BR84 538 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 SRA1Q9HD15 236 aaKnown RBP7.5□□□□□ -1.21
CTNND1-230ENST00000532245 MYNNQ9NPC7 610 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 C8orf4Q9NR00 106 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 SMOXQ9NWM0 555 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 TNFRSF10DQ9UBN6 386 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 WDR37Q9Y2I8 494 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 A0A0G2JPF8 293 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 HNRNPCL3B7ZW38 293 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 GKN3PP0CG01 181 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 HNRNPCL4P0DMR1 293 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 UBL4AP11441 157 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 CD1CP29017 333 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 MAP3K8P41279 467 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 CAPZBP47756 277 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 REEP5Q00765 189 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 GALK2Q01415 458 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 TNFRSF17Q02223 184 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 GPR107Q5VW38 600 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 PRAMEF8Q5VWM4 474 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 PRAMEF7Q5VXH5 474 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 LAPTM4BQ86VI4 370 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 ALDH16A1Q8IZ83 802 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 GALNT15Q8N3T1 639 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 ZCCHC7Q8N3Z6 543 aaKnown RBP7.5□□□□□ -1.21
CTNND1-230ENST00000532245 FAM86B1Q8N7N1 296 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 MRGPRX3Q96LB0 322 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 ZNF317Q96PQ6 595 aaPredicted RBP7.5□□□□□ -1.21
CTNND1-230ENST00000532245 MAP1BP46821 2468 aaKnown RBP7.5□□□□□ -1.21
CTNND1-230ENST00000532245 SLC5A10A0PJK1 596 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 BLACEA4D250 179 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 ZNF670-ZNF695F2Z2N8 137 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 SULT2B1O00204 365 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 AREL1O15033 823 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 ZNF208O43345 1280 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 ECDO95905 644 aaPredicted RBP7.5□□□□□ -1.21
CTNND1-230ENST00000532245 EDNRAP25101 427 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 GBX2P52951 348 aaPredicted RBP7.5□□□□□ -1.21
CTNND1-230ENST00000532245 MADCAM1Q13477 382 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 CBFBQ13951 182 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 LAIR1Q6GTX8 287 aa7.5□□□□□ -1.21
CTNND1-230ENST00000532245 ZNF619Q8N2I2 560 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms