RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 ATP5F1P24539 256 aaPredicted RBP15.34■□□□□ 0.05
CPSF1-207ENST00000531727 HMOX2P30519 316 aa15.34■□□□□ 0.05
CPSF1-207ENST00000531727 ZNF136P52737 540 aa15.34■□□□□ 0.05
CPSF1-207ENST00000531727 ART1P52961 327 aa15.34■□□□□ 0.05
CPSF1-207ENST00000531727 NAGLUP54802 743 aa15.34■□□□□ 0.05
CPSF1-207ENST00000531727 RAE1P78406 368 aaKnown RBP15.34■□□□□ 0.05
CPSF1-207ENST00000531727 ZNF628Q5EBL2 1059 aa15.34■□□□□ 0.05
CPSF1-207ENST00000531727 TRMT10CQ7L0Y3 403 aaKnown RBP15.34■□□□□ 0.05
CPSF1-207ENST00000531727 YRDCQ86U90 279 aaKnown RBP15.34■□□□□ 0.05
CPSF1-207ENST00000531727 CCDC116Q8IYX3 515 aa15.34■□□□□ 0.05
CPSF1-207ENST00000531727 GBP7Q8N8V2 638 aaPredicted RBP15.34■□□□□ 0.05
CPSF1-207ENST00000531727 MBD3L2Q8NHZ7 208 aaPredicted RBP15.34■□□□□ 0.05
CPSF1-207ENST00000531727 METTL6Q8TCB7 284 aa15.34■□□□□ 0.05
CPSF1-207ENST00000531727 TRIB1Q96RU8 372 aa15.34■□□□□ 0.05
CPSF1-207ENST00000531727 POLDIP3Q9BY77 421 aaKnown RBP15.34■□□□□ 0.05
CPSF1-207ENST00000531727 ACPTQ9BZG2 426 aa15.34■□□□□ 0.05
CPSF1-207ENST00000531727 CALHM2Q9HA72 323 aa15.34■□□□□ 0.05
CPSF1-207ENST00000531727 PFDN4Q9NQP4 134 aa15.34■□□□□ 0.05
CPSF1-207ENST00000531727 EHD3Q9NZN3 535 aa15.34■□□□□ 0.05
CPSF1-207ENST00000531727 KLRF1Q9NZS2 232 aa15.34■□□□□ 0.05
CPSF1-207ENST00000531727 CRIM1Q9NZV1 1036 aa15.34■□□□□ 0.05
CPSF1-207ENST00000531727 FOXD3Q9UJU5 478 aaPredicted RBP15.34■□□□□ 0.05
CPSF1-207ENST00000531727 NFU1Q9UMS0 254 aa15.34■□□□□ 0.05
CPSF1-207ENST00000531727 MAPRE3Q9UPY8 281 aa15.34■□□□□ 0.05
CPSF1-207ENST00000531727 EXO1Q9UQ84 846 aaKnown RBP15.34■□□□□ 0.05
CPSF1-207ENST00000531727 DLGAP4Q9Y2H0 992 aa15.34■□□□□ 0.05
CPSF1-207ENST00000531727 STK38LQ9Y2H1 464 aa15.34■□□□□ 0.05
CPSF1-207ENST00000531727 GPR55Q9Y2T6 319 aaPredicted RBP15.34■□□□□ 0.05
CPSF1-207ENST00000531727 PRAMEF25A6NGN4 478 aa15.33■□□□□ 0.04
CPSF1-207ENST00000531727 OR6C70A6NIJ9 312 aa15.33■□□□□ 0.04
CPSF1-207ENST00000531727 HTR6P50406 440 aa15.33■□□□□ 0.04
CPSF1-207ENST00000531727 PRKAA2P54646 552 aa15.33■□□□□ 0.04
CPSF1-207ENST00000531727 FLYWCH1Q4VC44 716 aa15.33■□□□□ 0.04
CPSF1-207ENST00000531727 SPIN4Q56A73 249 aa15.33■□□□□ 0.04
CPSF1-207ENST00000531727 SLC22A9Q8IVM8 553 aa15.33■□□□□ 0.04
CPSF1-207ENST00000531727 SAMD14Q8IZD0 417 aaPredicted RBP15.33■□□□□ 0.04
CPSF1-207ENST00000531727 TMBIM1Q969X1 311 aa15.33■□□□□ 0.04
CPSF1-207ENST00000531727 ERP27Q96DN0 273 aa15.33■□□□□ 0.04
CPSF1-207ENST00000531727 L3HYPDHQ96EM0 354 aa15.33■□□□□ 0.04
CPSF1-207ENST00000531727 BTBD9Q96Q07 612 aa15.33■□□□□ 0.04
CPSF1-207ENST00000531727 GPATCH1Q9BRR8 931 aaKnown RBP15.33■□□□□ 0.04
CPSF1-207ENST00000531727 OR2B2Q9GZK3 357 aa15.33■□□□□ 0.04
CPSF1-207ENST00000531727 SERHLQ9NQF3 203 aa15.33■□□□□ 0.04
CPSF1-207ENST00000531727 RASSF1Q9NS23 344 aa15.33■□□□□ 0.04
CPSF1-207ENST00000531727 GNG14A0A1W2PPG7 69 aa15.32■□□□□ 0.04
CPSF1-207ENST00000531727 FAM221AA4D161 298 aa15.32■□□□□ 0.04
CPSF1-207ENST00000531727 RIPK2O43353 540 aa15.32■□□□□ 0.04
CPSF1-207ENST00000531727 ABCB7O75027 752 aa15.32■□□□□ 0.04
CPSF1-207ENST00000531727 CBR3O75828 277 aa15.32■□□□□ 0.04
CPSF1-207ENST00000531727 ENO1P06733 434 aaKnown RBP15.32■□□□□ 0.04
CPSF1-207ENST00000531727 CPN1P15169 458 aa15.32■□□□□ 0.04
CPSF1-207ENST00000531727 CTSSP25774 331 aa15.32■□□□□ 0.04
CPSF1-207ENST00000531727 GCKP35557 465 aa15.32■□□□□ 0.04
CPSF1-207ENST00000531727 IST1P53990 364 aa15.32■□□□□ 0.04
CPSF1-207ENST00000531727 PKNOX1P55347 436 aa15.32■□□□□ 0.04
CPSF1-207ENST00000531727 ACSM2AQ08AH3 577 aa15.32■□□□□ 0.04
CPSF1-207ENST00000531727 LCP2Q13094 533 aa15.32■□□□□ 0.04
CPSF1-207ENST00000531727 RCAN2Q14206 197 aa15.32■□□□□ 0.04
CPSF1-207ENST00000531727 HEPACAMQ14CZ8 416 aa15.32■□□□□ 0.04
CPSF1-207ENST00000531727 ACSM2BQ68CK6 577 aa15.32■□□□□ 0.04
CPSF1-207ENST00000531727 WDSUB1Q8N9V3 476 aa15.32■□□□□ 0.04
CPSF1-207ENST00000531727 OR9A2Q8NGT5 310 aa15.32■□□□□ 0.04
CPSF1-207ENST00000531727 ZPLD1Q8TCW7 415 aa15.32■□□□□ 0.04
CPSF1-207ENST00000531727 ACMSDQ8TDX5 336 aa15.32■□□□□ 0.04
CPSF1-207ENST00000531727 C16orf78Q8WTQ4 265 aa15.32■□□□□ 0.04
CPSF1-207ENST00000531727 FAM222BQ8WU58 562 aa15.32■□□□□ 0.04
CPSF1-207ENST00000531727 NINJ1Q92982 152 aa15.32■□□□□ 0.04
CPSF1-207ENST00000531727 EXOSC8Q96B26 276 aaKnown RBP15.32■□□□□ 0.04
CPSF1-207ENST00000531727 TMCO6Q96DC7 493 aa15.32■□□□□ 0.04
CPSF1-207ENST00000531727 SLC35A4Q96G79 324 aa15.32■□□□□ 0.04
CPSF1-207ENST00000531727 APIPQ96GX9 242 aa15.32■□□□□ 0.04
CPSF1-207ENST00000531727 COL21A1Q96P44 957 aa15.32■□□□□ 0.04
CPSF1-207ENST00000531727 CLEC4MQ9H2X3 399 aaPredicted RBP15.32■□□□□ 0.04
CPSF1-207ENST00000531727 EPB41L4BQ9H329 900 aa15.32■□□□□ 0.04
CPSF1-207ENST00000531727 ANKRA2Q9H9E1 313 aa15.32■□□□□ 0.04
CPSF1-207ENST00000531727 A6NNC1 897 aa15.31■□□□□ 0.04
CPSF1-207ENST00000531727 GOLGA8RI6L899 631 aa15.31■□□□□ 0.04
CPSF1-207ENST00000531727 ERN1O75460 977 aaKnown RBP15.31■□□□□ 0.04
CPSF1-207ENST00000531727 REM1O75628 298 aa15.31■□□□□ 0.04
CPSF1-207ENST00000531727 IL18BPO95998 194 aa15.31■□□□□ 0.04
CPSF1-207ENST00000531727 GSTA1P08263 222 aa15.31■□□□□ 0.04
CPSF1-207ENST00000531727 CT45A8P0DMV1 189 aa15.31■□□□□ 0.04
CPSF1-207ENST00000531727 CT45A9P0DMV2 189 aa15.31■□□□□ 0.04
CPSF1-207ENST00000531727 CYP4B1P13584 511 aa15.31■□□□□ 0.04
CPSF1-207ENST00000531727 TIA1P31483 386 aaKnown RBP eCLIP15.31■□□□□ 0.04
CPSF1-207ENST00000531727 OPRM1P35372 400 aa15.31■□□□□ 0.04
CPSF1-207ENST00000531727 GSTM5P46439 218 aa15.31■□□□□ 0.04
CPSF1-207ENST00000531727 HMGCS1Q01581 520 aa15.31■□□□□ 0.04
CPSF1-207ENST00000531727 ERCC6LQ2NKX8 1250 aa15.31■□□□□ 0.04
CPSF1-207ENST00000531727 CT45A2Q5DJT8 189 aa15.31■□□□□ 0.04
CPSF1-207ENST00000531727 GALNT18Q6P9A2 607 aa15.31■□□□□ 0.04
CPSF1-207ENST00000531727 IFT20Q8IY31 132 aa15.31■□□□□ 0.04
CPSF1-207ENST00000531727 C9orf106Q8NAJ2 232 aa15.31■□□□□ 0.04
CPSF1-207ENST00000531727 OR14L1PQ8NHC6 308 aa15.31■□□□□ 0.04
CPSF1-207ENST00000531727 KAT2AQ92830 837 aa15.31■□□□□ 0.04
CPSF1-207ENST00000531727 C11orf24Q96F05 449 aaPredicted RBP15.31■□□□□ 0.04
CPSF1-207ENST00000531727 VSTM2LQ96N03 204 aa15.31■□□□□ 0.04
CPSF1-207ENST00000531727 SLC35C2Q9NQQ7 365 aa15.31■□□□□ 0.04
CPSF1-207ENST00000531727 GIMAP4Q9NUV9 329 aa15.31■□□□□ 0.04
CPSF1-207ENST00000531727 CBLCQ9ULV8 474 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms