RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 LPAR4Q99677 370 aa6.48□□□□□ -1.37
TRIM53CP-201ENST00000531490 MRPL1Q9BYD6 325 aaKnown RBP6.48□□□□□ -1.37
TRIM53CP-201ENST00000531490 HES7Q9BYE0 225 aa6.48□□□□□ -1.37
TRIM53CP-201ENST00000531490 ALOXE3Q9BYJ1 711 aa6.48□□□□□ -1.37
TRIM53CP-201ENST00000531490 SHCBP1LQ9BZQ2 653 aa6.48□□□□□ -1.37
TRIM53CP-201ENST00000531490 ENKD1Q9H0I2 346 aa6.48□□□□□ -1.37
TRIM53CP-201ENST00000531490 GSTO2Q9H4Y5 243 aa6.48□□□□□ -1.37
TRIM53CP-201ENST00000531490 ZCCHC4Q9H5U6 513 aa6.48□□□□□ -1.37
TRIM53CP-201ENST00000531490 CDCP1Q9H5V8 836 aa6.48□□□□□ -1.37
TRIM53CP-201ENST00000531490 COPS7BQ9H9Q2 264 aaPredicted RBP6.48□□□□□ -1.37
TRIM53CP-201ENST00000531490 KCNK13Q9HB14 408 aa6.48□□□□□ -1.37
TRIM53CP-201ENST00000531490 LYRM4Q9HD34 91 aa6.48□□□□□ -1.37
TRIM53CP-201ENST00000531490 PSD3Q9NYI0 1048 aa6.48□□□□□ -1.37
TRIM53CP-201ENST00000531490 ZNF223Q9UK11 482 aaPredicted RBP6.48□□□□□ -1.37
TRIM53CP-201ENST00000531490 GRID1Q9ULK0 1009 aa6.48□□□□□ -1.37
TRIM53CP-201ENST00000531490 TMCO1Q9UM00 188 aa6.48□□□□□ -1.37
TRIM53CP-201ENST00000531490 MEMO1Q9Y316 297 aa6.48□□□□□ -1.37
TRIM53CP-201ENST00000531490 ASB4Q9Y574 426 aa6.48□□□□□ -1.37
TRIM53CP-201ENST00000531490 NSD1Q96L73 2696 aaPredicted RBP6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 CSPG4Q6UVK1 2322 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 A0A088AWK7 358 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 A0A0A6YYD5 115 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 SAGE2PA6NJ88 616 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 TMEM200CA6NKL6 621 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 NPIPA5E9PKD4 350 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 CLDN4O14493 209 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 COPEO14579 308 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 ADAM10O14672 748 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 FGF17O60258 216 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 MYO1DO94832 1006 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 SCELO95171 688 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 OTCP00480 354 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 CRYABP02511 175 aaKnown RBP6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 KLK1P06870 262 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 CYC1P08574 325 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 FAM58BPP0C7Q3 252 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 MYL2P10916 166 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 CPA3P15088 417 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 KLK2P20151 261 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 ZNF10P21506 573 aaPredicted RBP6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 CPN2P22792 545 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 SERPINB3P29508 390 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 SERPINB1P30740 379 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 CRHR1P34998 444 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 HTR6P50406 440 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 RAP1GDS1P52306 607 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 IST1P53990 364 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 CASP6P55212 293 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 RBPJQ06330 500 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 ZNF33BQ06732 778 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 TGM3Q08188 693 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 LSAMPQ13449 338 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 ZNF750Q32MQ0 723 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 TRABD2AQ86V40 505 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 GPR180Q86V85 440 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 LCA5Q86VQ0 697 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 SLC22A9Q8IVM8 553 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 C10orf107Q8IVU9 208 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 ZNF595Q8IYB9 648 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 BEST3Q8N1M1 668 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 CCNYL1Q8N7R7 359 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 BANPQ8N9N5 519 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 METTL6Q8TCB7 284 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 AGAP11Q8TF27 550 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 THAP3Q8WTV1 239 aaPredicted RBP6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 SELENOMQ8WWX9 145 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 SDCCAG3Q96C92 435 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 L3HYPDHQ96EM0 354 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 MAGED4Q96JG8 741 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 C20orf173Q96LM9 149 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 SIGLEC12Q96PQ1 595 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 SMR3AQ99954 134 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 UCK2Q9BZX2 261 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 ROPN1BQ9BZX4 212 aaPredicted RBP6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 DDX31Q9H8H2 851 aaKnown RBP6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 ROPN1Q9HAT0 212 aaPredicted RBP6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 MMP25Q9NPA2 562 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 OXSMQ9NWU1 459 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 TEX10Q9NXF1 929 aaPredicted RBP6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 SLC17A7Q9P2U7 560 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 C19orf25Q9UFG5 118 aaPredicted RBP6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 NPIPA1Q9UND3 350 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 PLLPQ9Y342 182 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 MMACHCQ9Y4U1 282 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 PMF1-BGLAPU3KQ54 211 aa6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 FN1P02751 2386 aaKnown RBP6.47□□□□□ -1.37
TRIM53CP-201ENST00000531490 NKX2-6A6NCS4 301 aa6.46□□□□□ -1.37
TRIM53CP-201ENST00000531490 KRTAP9-7A8MTY7 169 aa6.46□□□□□ -1.37
TRIM53CP-201ENST00000531490 MANBAO00462 879 aa6.46□□□□□ -1.37
TRIM53CP-201ENST00000531490 ZNF354AO60765 605 aaPredicted RBP6.46□□□□□ -1.37
TRIM53CP-201ENST00000531490 PRAMEF2O60811 474 aa6.46□□□□□ -1.37
TRIM53CP-201ENST00000531490 GLRA3O75311 464 aa6.46□□□□□ -1.37
TRIM53CP-201ENST00000531490 IFNA16P05015 189 aa6.46□□□□□ -1.37
TRIM53CP-201ENST00000531490 AGAP20933 346 aa6.46□□□□□ -1.37
TRIM53CP-201ENST00000531490 HPDP32754 393 aaPredicted RBP6.46□□□□□ -1.37
TRIM53CP-201ENST00000531490 HMGCS1Q01581 520 aa6.46□□□□□ -1.37
TRIM53CP-201ENST00000531490 FOLH1Q04609 750 aa6.46□□□□□ -1.37
TRIM53CP-201ENST00000531490 ZNF844Q08AG5 666 aa6.46□□□□□ -1.37
TRIM53CP-201ENST00000531490 IFFO1Q0D2I5 559 aa6.46□□□□□ -1.37
TRIM53CP-201ENST00000531490 GALNT1Q10472 559 aaPredicted RBP6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms