RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 ZNHIT3Q15649 155 aaPredicted RBP17.68■□□□□ 0.42
SMPD1-205ENST00000531303 DUSP5Q16690 384 aa17.68■□□□□ 0.42
SMPD1-205ENST00000531303 GCNT6Q5T4J0 391 aa17.68■□□□□ 0.42
SMPD1-205ENST00000531303 CDC73Q6P1J9 531 aa17.68■□□□□ 0.42
SMPD1-205ENST00000531303 HSDL2Q6YN16 418 aa17.68■□□□□ 0.42
SMPD1-205ENST00000531303 SLC29A4Q7RTT9 530 aa17.68■□□□□ 0.42
SMPD1-205ENST00000531303 GPR155Q7Z3F1 870 aa17.68■□□□□ 0.42
SMPD1-205ENST00000531303 HPS6Q86YV9 775 aa17.68■□□□□ 0.42
SMPD1-205ENST00000531303 C9orf40Q8IXQ3 194 aa17.68■□□□□ 0.42
SMPD1-205ENST00000531303 ULK2Q8IYT8 1036 aa17.68■□□□□ 0.42
SMPD1-205ENST00000531303 CDRT4Q8N9R6 151 aa17.68■□□□□ 0.42
SMPD1-205ENST00000531303 APCDD1LQ8NCL9 501 aa17.68■□□□□ 0.42
SMPD1-205ENST00000531303 ZNF248Q8NDW4 579 aa17.68■□□□□ 0.42
SMPD1-205ENST00000531303 GPR151Q8TDV0 419 aa17.68■□□□□ 0.42
SMPD1-205ENST00000531303 ADAMTS17Q8TE56 1095 aa17.68■□□□□ 0.42
SMPD1-205ENST00000531303 CDS1Q92903 461 aa17.68■□□□□ 0.42
SMPD1-205ENST00000531303 CCDC124Q96CT7 223 aaKnown RBP17.68■□□□□ 0.42
SMPD1-205ENST00000531303 SLC35A4Q96G79 324 aa17.68■□□□□ 0.42
SMPD1-205ENST00000531303 VPS50Q96JG6 964 aa17.68■□□□□ 0.42
SMPD1-205ENST00000531303 CCDC86Q9H6F5 360 aaKnown RBP17.68■□□□□ 0.42
SMPD1-205ENST00000531303 ZNF223Q9UK11 482 aaPredicted RBP17.68■□□□□ 0.42
SMPD1-205ENST00000531303 AP3M1Q9Y2T2 418 aa17.68■□□□□ 0.42
SMPD1-205ENST00000531303 GMEB1Q9Y692 573 aa17.68■□□□□ 0.42
SMPD1-205ENST00000531303 ACACAQ13085 2346 aa17.67■□□□□ 0.42
SMPD1-205ENST00000531303 HMGN4O00479 90 aa17.67■□□□□ 0.42
SMPD1-205ENST00000531303 MAN2A2P49641 1150 aa17.67■□□□□ 0.42
SMPD1-205ENST00000531303 GZMMP51124 257 aa17.67■□□□□ 0.42
SMPD1-205ENST00000531303 CLCN2P51788 898 aa17.67■□□□□ 0.42
SMPD1-205ENST00000531303 EXT1Q16394 746 aa17.67■□□□□ 0.42
SMPD1-205ENST00000531303 PIGGQ5H8A4 983 aa17.67■□□□□ 0.42
SMPD1-205ENST00000531303 HLA-DQA1Q5Y7H0 255 aa17.67■□□□□ 0.42
SMPD1-205ENST00000531303 CALHM3Q86XJ0 350 aa17.67■□□□□ 0.42
SMPD1-205ENST00000531303 FBXW8Q8N3Y1 598 aa17.67■□□□□ 0.42
SMPD1-205ENST00000531303 OR2T12Q8NG77 320 aa17.67■□□□□ 0.42
SMPD1-205ENST00000531303 PIK3R3Q92569 461 aa17.67■□□□□ 0.42
SMPD1-205ENST00000531303 VSTM2LQ96N03 204 aa17.67■□□□□ 0.42
SMPD1-205ENST00000531303 SEMA4CQ9C0C4 833 aa17.67■□□□□ 0.42
SMPD1-205ENST00000531303 CD300AQ9UGN4 299 aa17.67■□□□□ 0.42
SMPD1-205ENST00000531303 ANGPTL2Q9UKU9 493 aa17.67■□□□□ 0.42
SMPD1-205ENST00000531303 CFL2Q9Y281 166 aa17.67■□□□□ 0.42
SMPD1-205ENST00000531303 NCOR2Q9Y618 2525 aa17.66■□□□□ 0.42
SMPD1-205ENST00000531303 C2orf92A0A1B0GVN3 265 aa17.66■□□□□ 0.42
SMPD1-205ENST00000531303 GXYLT2A0PJZ3 443 aa17.66■□□□□ 0.42
SMPD1-205ENST00000531303 TNFRSF21O75509 655 aa17.66■□□□□ 0.42
SMPD1-205ENST00000531303 HPP00738 406 aa17.66■□□□□ 0.42
SMPD1-205ENST00000531303 ANXA11P50995 505 aaKnown RBP17.66■□□□□ 0.42
SMPD1-205ENST00000531303 RNF4P78317 190 aa17.66■□□□□ 0.42
SMPD1-205ENST00000531303 MYBPC3Q14896 1274 aa17.66■□□□□ 0.42
SMPD1-205ENST00000531303 ADRM1Q16186 407 aa17.66■□□□□ 0.42
SMPD1-205ENST00000531303 PLAG1Q6DJT9 500 aa17.66■□□□□ 0.42
SMPD1-205ENST00000531303 ZCCHC12Q6PEW1 402 aa17.66■□□□□ 0.42
SMPD1-205ENST00000531303 OLIG3Q7RTU3 272 aa17.66■□□□□ 0.42
SMPD1-205ENST00000531303 SERPINA11Q86U17 422 aa17.66■□□□□ 0.42
SMPD1-205ENST00000531303 ZZZ3Q8IYH5 903 aa17.66■□□□□ 0.42
SMPD1-205ENST00000531303 COX18Q8N8Q8 333 aa17.66■□□□□ 0.42
SMPD1-205ENST00000531303 MIPOL1Q8TD10 442 aa17.66■□□□□ 0.42
SMPD1-205ENST00000531303 NACC2Q96BF6 587 aa17.66■□□□□ 0.42
SMPD1-205ENST00000531303 EGFL7Q9UHF1 273 aa17.66■□□□□ 0.42
SMPD1-205ENST00000531303 PPIEQ9UNP9 301 aaKnown RBP17.66■□□□□ 0.42
SMPD1-205ENST00000531303 A0A1W2PQ72 361 aa17.65■□□□□ 0.42
SMPD1-205ENST00000531303 FAM220BPB1ANY3 271 aa17.65■□□□□ 0.42
SMPD1-205ENST00000531303 GSTA4O15217 222 aa17.65■□□□□ 0.42
SMPD1-205ENST00000531303 ME2P23368 584 aa17.65■□□□□ 0.42
SMPD1-205ENST00000531303 RFX3P48380 749 aa17.65■□□□□ 0.42
SMPD1-205ENST00000531303 EBPQ15125 230 aaKnown RBP17.65■□□□□ 0.42
SMPD1-205ENST00000531303 NPSR1Q6W5P4 371 aa17.65■□□□□ 0.42
SMPD1-205ENST00000531303 C16orf47Q6ZP98 133 aaPredicted RBP17.65■□□□□ 0.42
SMPD1-205ENST00000531303 GALNT10Q86SR1 603 aa17.65■□□□□ 0.42
SMPD1-205ENST00000531303 PTOV1Q86YD1 416 aa17.65■□□□□ 0.42
SMPD1-205ENST00000531303 LGI4Q8N135 537 aa17.65■□□□□ 0.42
SMPD1-205ENST00000531303 ARHGAP24Q8N264 748 aa17.65■□□□□ 0.42
SMPD1-205ENST00000531303 OR4N2Q8NGD1 307 aa17.65■□□□□ 0.42
SMPD1-205ENST00000531303 NFKBIDQ8NI38 313 aa17.65■□□□□ 0.42
SMPD1-205ENST00000531303 SNIP1Q8TAD8 396 aaKnown RBP17.65■□□□□ 0.42
SMPD1-205ENST00000531303 M1APQ8TC57 530 aa17.65■□□□□ 0.42
SMPD1-205ENST00000531303 UTP4Q969X6 686 aaKnown RBP17.65■□□□□ 0.42
SMPD1-205ENST00000531303 LMF2Q9BU23 707 aaKnown RBP17.65■□□□□ 0.42
SMPD1-205ENST00000531303 DEFB126Q9BYW3 111 aa17.65■□□□□ 0.42
SMPD1-205ENST00000531303 WWTR1Q9GZV5 400 aa17.65■□□□□ 0.42
SMPD1-205ENST00000531303 PCDHAC1Q9H158 963 aa17.65■□□□□ 0.42
SMPD1-205ENST00000531303 PIGUQ9H490 435 aa17.65■□□□□ 0.42
SMPD1-205ENST00000531303 OR10H1Q9Y4A9 318 aa17.65■□□□□ 0.42
SMPD1-205ENST00000531303 DOCK10Q96BY6 2186 aa17.64■□□□□ 0.42
SMPD1-205ENST00000531303 MED13Q9UHV7 2174 aa17.64■□□□□ 0.42
SMPD1-205ENST00000531303 DUXAA6NLW8 204 aa17.64■□□□□ 0.41
SMPD1-205ENST00000531303 OR6C76A6NM76 312 aa17.64■□□□□ 0.41
SMPD1-205ENST00000531303 A8MUI8 341 aa17.64■□□□□ 0.41
SMPD1-205ENST00000531303 A8MVJ9 347 aa17.64■□□□□ 0.41
SMPD1-205ENST00000531303 SLC28A2O43868 658 aa17.64■□□□□ 0.41
SMPD1-205ENST00000531303 ZFAND5O76080 213 aa17.64■□□□□ 0.41
SMPD1-205ENST00000531303 BCHEP06276 602 aa17.64■□□□□ 0.41
SMPD1-205ENST00000531303 NR2F1P10589 423 aa17.64■□□□□ 0.41
SMPD1-205ENST00000531303 HSD17B1P14061 328 aa17.64■□□□□ 0.41
SMPD1-205ENST00000531303 NQO1P15559 274 aaKnown RBP17.64■□□□□ 0.41
SMPD1-205ENST00000531303 NCK1P16333 377 aa17.64■□□□□ 0.41
SMPD1-205ENST00000531303 NR0B1P51843 470 aaKnown RBP17.64■□□□□ 0.41
SMPD1-205ENST00000531303 PSG6Q00889 435 aa17.64■□□□□ 0.41
SMPD1-205ENST00000531303 Q0VFX4 171 aa17.64■□□□□ 0.41
SMPD1-205ENST00000531303 SYPL1Q16563 259 aa17.64■□□□□ 0.41
SMPD1-205ENST00000531303 CCNJQ5T5M9 372 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms