RNA–Protein interactions for RNA: ENST00000531110.5

CD44-231, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-231ENST00000531110 SLC35D3Q5M8T2 416 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 LIPMQ5VYY2 423 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 NAPEPLDQ6IQ20 393 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 PRR5LQ6MZQ0 368 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 RPUSD3Q6P087 351 aaKnown RBP5.28□□□□□ -1.56
CD44-231ENST00000531110 PNCKQ6P2M8 343 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 DHRS13Q6UX07 377 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 CERS6Q6ZMG9 384 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 CFAP77Q6ZQR2 320 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 EIF3MQ7L2H7 374 aaKnown RBP5.28□□□□□ -1.56
CD44-231ENST00000531110 RRAGAQ7L523 313 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 GDPD3Q7L5L3 318 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 HSD17B13Q7Z5P4 300 aaPredicted RBP5.28□□□□□ -1.56
CD44-231ENST00000531110 LDB1Q86U70 411 aaPredicted RBP5.28□□□□□ -1.56
CD44-231ENST00000531110 TMEM17Q86X19 198 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 GCNT2Q8N0V5 402 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 MRPL43Q8N983 215 aaKnown RBP5.28□□□□□ -1.56
CD44-231ENST00000531110 GDPD1Q8N9F7 314 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 Q8N9G6 341 aaPredicted RBP5.28□□□□□ -1.56
CD44-231ENST00000531110 CHDHQ8NE62 594 aaPredicted RBP5.28□□□□□ -1.56
CD44-231ENST00000531110 OR10A7Q8NGE5 316 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 OR13C2Q8NGS9 318 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 EXOSC8Q96B26 276 aaKnown RBP5.28□□□□□ -1.56
CD44-231ENST00000531110 PHF21BQ96EK2 531 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 ZFYVE19Q96K21 471 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 GPR137Q96N19 417 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 APOL2Q9BQE5 337 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 ZNF2Q9BSG1 426 aaPredicted RBP5.28□□□□□ -1.56
CD44-231ENST00000531110 BBS2Q9BXC9 721 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 TOLLIPQ9H0E2 274 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 ESRP2Q9H6T0 727 aaKnown RBP5.28□□□□□ -1.56
CD44-231ENST00000531110 POLE4Q9NR33 117 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 SLC35D1Q9NTN3 355 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 FAM49BQ9NUQ9 324 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 MYEF2Q9P2K5 600 aaKnown RBP5.28□□□□□ -1.56
CD44-231ENST00000531110 CACNG4Q9UBN1 327 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 MIOXQ9UGB7 285 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 NAALADL1Q9UQQ1 740 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 POLR3HQ9Y535 204 aaPredicted RBP5.28□□□□□ -1.56
CD44-231ENST00000531110 PSAT1Q9Y617 370 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 NWD1Q149M9 1564 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 CDC42BPGQ6DT37 1551 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 MYH10P35580 1976 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 PPLO60437 1756 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 A0A1B0GW55 424 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 I6L893 689 aaPredicted RBP5.27□□□□□ -1.57
CD44-231ENST00000531110 J3QRK9 145 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 SURF4O15260 269 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 GPAA1O43292 621 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 HSPA12AO43301 675 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 LIASO43766 372 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 SLC25A17O43808 307 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 CTNSO60931 367 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 SDC3O75056 442 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 PRKRAO75569 313 aaKnown RBP5.27□□□□□ -1.57
CD44-231ENST00000531110 OR2B3O76000 313 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 KCNK2O95069 426 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 PGLSO95336 258 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 CBX6O95503 412 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 TDP2O95551 362 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 GH2P01242 217 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 PPBPP02775 128 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 ALPPP05187 535 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 HEXAP06865 529 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 CRYGCP07315 174 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 CHRNGP07510 517 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 GUSBP08236 651 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 HCKP08631 526 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 ABHD2P08910 425 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 CTXN2P0C2S0 81 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 DUX4L2P0CJ85 424 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 DUX4L3P0CJ86 424 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 DUX4L4P0CJ87 422 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 DUX4L5P0CJ88 424 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 DUX4L6P0CJ89 424 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 DUX4L7P0CJ90 424 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 CASP1P29466 404 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 RFC3P40938 356 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 PMELP40967 661 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 OPRL1P41146 370 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 PRKCIP41743 596 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 TMPOP42166 694 aaKnown RBP5.27□□□□□ -1.57
CD44-231ENST00000531110 CDKN2CP42773 168 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 MAGEA1P43355 309 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 OMPP47874 163 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 ZNF81P51508 661 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 AKR1D1P51857 326 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 DCAF7P61962 342 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 GTF2BQ00403 316 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 MAB21L1Q13394 359 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 GPM6BQ13491 265 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 GPR50Q13585 617 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 KLF9Q13886 244 aaPredicted RBP5.27□□□□□ -1.57
CD44-231ENST00000531110 RPS6KA2Q15349 733 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 ZNF528Q3MIS6 628 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 GPAT3Q53EU6 434 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 FGD3Q5JSP0 725 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 C1orf186Q6ZWK4 172 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 C10orf71Q711Q0 1435 aa5.27□□□□□ -1.57
CD44-231ENST00000531110 BIVMQ86UB2 503 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms