RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 KIAA1324Q6UXG2 1013 aaKnown RBP5.23□□□□□ -1.57
PCF11-205ENST00000530906 ZNF793Q6ZN11 406 aa5.23□□□□□ -1.57
PCF11-205ENST00000530906 TUBA1AQ71U36 451 aa5.23□□□□□ -1.57
PCF11-205ENST00000530906 TSEN54Q7Z6J9 526 aaKnown RBP5.23□□□□□ -1.57
PCF11-205ENST00000530906 B3GNT8Q7Z7M8 397 aa5.23□□□□□ -1.57
PCF11-205ENST00000530906 GALNT5Q7Z7M9 940 aa5.23□□□□□ -1.57
PCF11-205ENST00000530906 CACUL1Q86Y37 369 aa5.23□□□□□ -1.57
PCF11-205ENST00000530906 C1QL4Q86Z23 238 aa5.23□□□□□ -1.57
PCF11-205ENST00000530906 TRIM48Q8IWZ4 208 aa5.23□□□□□ -1.57
PCF11-205ENST00000530906 SDR16C5Q8N3Y7 309 aa5.23□□□□□ -1.57
PCF11-205ENST00000530906 DNAJC22Q8N4W6 341 aa5.23□□□□□ -1.57
PCF11-205ENST00000530906 SLC5A8Q8N695 610 aa5.23□□□□□ -1.57
PCF11-205ENST00000530906 ZNF540Q8NDQ6 660 aa5.23□□□□□ -1.57
PCF11-205ENST00000530906 C7orf57Q8NEG2 295 aa5.23□□□□□ -1.57
PCF11-205ENST00000530906 BPIFB6Q8NFQ5 453 aa5.23□□□□□ -1.57
PCF11-205ENST00000530906 OR5AK3PQ8NH89 298 aa5.23□□□□□ -1.57
PCF11-205ENST00000530906 ADAMTS18Q8TE60 1221 aa5.23□□□□□ -1.57
PCF11-205ENST00000530906 GAB3Q8WWW8 586 aa5.23□□□□□ -1.57
PCF11-205ENST00000530906 S100ZQ8WXG8 99 aa5.23□□□□□ -1.57
PCF11-205ENST00000530906 OR1E3Q8WZA6 343 aa5.23□□□□□ -1.57
PCF11-205ENST00000530906 BORCS5Q969J3 196 aa5.23□□□□□ -1.57
PCF11-205ENST00000530906 EXOSC8Q96B26 276 aaKnown RBP5.23□□□□□ -1.57
PCF11-205ENST00000530906 PPP1R14BQ96C90 147 aa5.23□□□□□ -1.57
PCF11-205ENST00000530906 TM4SF19Q96DZ7 209 aa5.23□□□□□ -1.57
PCF11-205ENST00000530906 MS4A4EQ96PG1 132 aa5.23□□□□□ -1.57
PCF11-205ENST00000530906 TRNT1Q96Q11 434 aaKnown RBP5.23□□□□□ -1.57
PCF11-205ENST00000530906 ALPK1Q96QP1 1244 aa5.23□□□□□ -1.57
PCF11-205ENST00000530906 TREX2Q9BQ50 279 aaPredicted RBP5.23□□□□□ -1.57
PCF11-205ENST00000530906 PRRG3Q9BZD7 231 aa5.23□□□□□ -1.57
PCF11-205ENST00000530906 UCK2Q9BZX2 261 aa5.23□□□□□ -1.57
PCF11-205ENST00000530906 LHPPQ9H008 270 aa5.23□□□□□ -1.57
PCF11-205ENST00000530906 GLIPR2Q9H4G4 154 aa5.23□□□□□ -1.57
PCF11-205ENST00000530906 UCK1Q9HA47 277 aa5.23□□□□□ -1.57
PCF11-205ENST00000530906 SLAMF7Q9NQ25 335 aa5.23□□□□□ -1.57
PCF11-205ENST00000530906 PRDM8Q9NQV8 689 aa5.23□□□□□ -1.57
PCF11-205ENST00000530906 SLC2A4RGQ9NR83 387 aa5.23□□□□□ -1.57
PCF11-205ENST00000530906 POLE3Q9NRF9 147 aa5.23□□□□□ -1.57
PCF11-205ENST00000530906 FKBP14Q9NWM8 211 aa5.23□□□□□ -1.57
PCF11-205ENST00000530906 TEX10Q9NXF1 929 aaPredicted RBP5.23□□□□□ -1.57
PCF11-205ENST00000530906 GIN1Q9NXP7 522 aa5.23□□□□□ -1.57
PCF11-205ENST00000530906 KLHL28Q9NXS3 571 aa5.23□□□□□ -1.57
PCF11-205ENST00000530906 CLDND1Q9NY35 253 aa5.23□□□□□ -1.57
PCF11-205ENST00000530906 PTGFRNQ9P2B2 879 aa5.23□□□□□ -1.57
PCF11-205ENST00000530906 TBC1D29Q9UFV1 150 aa5.23□□□□□ -1.57
PCF11-205ENST00000530906 WARS2Q9UGM6 360 aaKnown RBP5.23□□□□□ -1.57
PCF11-205ENST00000530906 MOSPD1Q9UJG1 213 aa5.23□□□□□ -1.57
PCF11-205ENST00000530906 FBXL21Q9UKT6 434 aa5.23□□□□□ -1.57
PCF11-205ENST00000530906 ACSL6Q9UKU0 697 aa5.23□□□□□ -1.57
PCF11-205ENST00000530906 CES1P1Q9UKY3 287 aa5.23□□□□□ -1.57
PCF11-205ENST00000530906 CDC14AQ9UNH5 594 aa5.23□□□□□ -1.57
PCF11-205ENST00000530906 B3GNT3Q9Y2A9 372 aa5.23□□□□□ -1.57
PCF11-205ENST00000530906 IFT52Q9Y366 437 aa5.23□□□□□ -1.57
PCF11-205ENST00000530906 TESMINQ9Y4I5 508 aa5.23□□□□□ -1.57
PCF11-205ENST00000530906 PCDHGA6Q9Y5G7 932 aa5.23□□□□□ -1.57
PCF11-205ENST00000530906 A3GALT2U3KPV4 340 aa5.23□□□□□ -1.57
PCF11-205ENST00000530906 LRP4O75096 1905 aa5.23□□□□□ -1.57
PCF11-205ENST00000530906 A0A087WV62 115 aa5.22□□□□□ -1.57
PCF11-205ENST00000530906 PRAMEF33A0A0G2JMD5 474 aa5.22□□□□□ -1.57
PCF11-205ENST00000530906 A0A0J9YY10 115 aa5.22□□□□□ -1.57
PCF11-205ENST00000530906 A0A1W2PR48 441 aa5.22□□□□□ -1.57
PCF11-205ENST00000530906 TCRBV21S2A2A0A5A6 115 aa5.22□□□□□ -1.57
PCF11-205ENST00000530906 PRR23AA6NEV1 266 aa5.22□□□□□ -1.57
PCF11-205ENST00000530906 TTC36A6NLP5 189 aa5.22□□□□□ -1.57
PCF11-205ENST00000530906 OR52A4PA6NMU1 304 aa5.22□□□□□ -1.57
PCF11-205ENST00000530906 SNTNA6NMZ2 147 aa5.22□□□□□ -1.57
PCF11-205ENST00000530906 ZAR1LA6NP61 321 aa5.22□□□□□ -1.57
PCF11-205ENST00000530906 PTGES3LE9PB15 166 aa5.22□□□□□ -1.57
PCF11-205ENST00000530906 RTCAO00442 366 aaKnown RBP5.22□□□□□ -1.57
PCF11-205ENST00000530906 B3GALT2O43825 422 aa5.22□□□□□ -1.57
PCF11-205ENST00000530906 SLC28A2O43868 658 aa5.22□□□□□ -1.57
PCF11-205ENST00000530906 PCDHGA12O60330 932 aa5.22□□□□□ -1.57
PCF11-205ENST00000530906 PRAMEF10O60809 474 aa5.22□□□□□ -1.57
PCF11-205ENST00000530906 ZNF217O75362 1048 aa5.22□□□□□ -1.57
PCF11-205ENST00000530906 WBP4O75554 376 aaKnown RBP5.22□□□□□ -1.57
PCF11-205ENST00000530906 CLPXO76031 633 aa5.22□□□□□ -1.57
PCF11-205ENST00000530906 DIRAS1O95057 198 aa5.22□□□□□ -1.57
PCF11-205ENST00000530906 AIFM1O95831 613 aa5.22□□□□□ -1.57
PCF11-205ENST00000530906 LGI1O95970 557 aa5.22□□□□□ -1.57
PCF11-205ENST00000530906 VIPP01282 170 aa5.22□□□□□ -1.57
PCF11-205ENST00000530906 OPN1SWP03999 348 aa5.22□□□□□ -1.57
PCF11-205ENST00000530906 SERPIND1P05546 499 aa5.22□□□□□ -1.57
PCF11-205ENST00000530906 SMIM10L1P0DMW3 83 aa5.22□□□□□ -1.57
PCF11-205ENST00000530906 OSMP13725 252 aa5.22□□□□□ -1.57
PCF11-205ENST00000530906 GABRG2P18507 467 aa5.22□□□□□ -1.57
PCF11-205ENST00000530906 PEBP1P30086 187 aaKnown RBP5.22□□□□□ -1.57
PCF11-205ENST00000530906 MAT2AP31153 395 aaKnown RBP5.22□□□□□ -1.57
PCF11-205ENST00000530906 PRKAR1BP31321 381 aa5.22□□□□□ -1.57
PCF11-205ENST00000530906 LTBRP36941 435 aa5.22□□□□□ -1.57
PCF11-205ENST00000530906 YAP1P46937 504 aaKnown RBP5.22□□□□□ -1.57
PCF11-205ENST00000530906 CRISP1P54107 249 aa5.22□□□□□ -1.57
PCF11-205ENST00000530906 UBE2IP63279 158 aaKnown RBP5.22□□□□□ -1.57
PCF11-205ENST00000530906 HPCAP84074 193 aa5.22□□□□□ -1.57
PCF11-205ENST00000530906 IL1RL1Q01638 556 aa5.22□□□□□ -1.57
PCF11-205ENST00000530906 OCA2Q04671 838 aa5.22□□□□□ -1.57
PCF11-205ENST00000530906 EMX1Q04741 257 aaPredicted RBP5.22□□□□□ -1.57
PCF11-205ENST00000530906 DUSP7Q16829 419 aa5.22□□□□□ -1.57
PCF11-205ENST00000530906 PRSS53Q2L4Q9 553 aa5.22□□□□□ -1.57
PCF11-205ENST00000530906 ALG11Q2TAA5 492 aa5.22□□□□□ -1.57
PCF11-205ENST00000530906 FAM214AQ32MH5 1076 aa5.22□□□□□ -1.57
PCF11-205ENST00000530906 ZNF829Q3KNS6 432 aaPredicted RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms