RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 NUDCD1Q96RS6 583 aa6.29□□□□□ -1.4
CSDE1-213ENST00000530784 MGME1Q9BQP7 344 aa6.29□□□□□ -1.4
CSDE1-213ENST00000530784 SYT11Q9BT88 431 aa6.29□□□□□ -1.4
CSDE1-213ENST00000530784 DDA1Q9BW61 102 aa6.29□□□□□ -1.4
CSDE1-213ENST00000530784 ADNPQ9H2P0 1102 aa6.29□□□□□ -1.4
CSDE1-213ENST00000530784 B3GALT5Q9Y2C3 310 aa6.29□□□□□ -1.4
CSDE1-213ENST00000530784 SLC17A4Q9Y2C5 497 aa6.29□□□□□ -1.4
CSDE1-213ENST00000530784 IGHV1OR21-1A0A087WYE8 117 aa6.28□□□□□ -1.4
CSDE1-213ENST00000530784 EFCAB7A8K855 629 aa6.28□□□□□ -1.4
CSDE1-213ENST00000530784 ANKRD66B4E2M5 251 aa6.28□□□□□ -1.4
CSDE1-213ENST00000530784 DUX1O43812 170 aa6.28□□□□□ -1.4
CSDE1-213ENST00000530784 RAD1O60671 282 aa6.28□□□□□ -1.4
CSDE1-213ENST00000530784 PGLSO95336 258 aa6.28□□□□□ -1.4
CSDE1-213ENST00000530784 LIFP15018 202 aa6.28□□□□□ -1.4
CSDE1-213ENST00000530784 ANXA7P20073 488 aaKnown RBP6.28□□□□□ -1.4
CSDE1-213ENST00000530784 HRH2P25021 359 aa6.28□□□□□ -1.4
CSDE1-213ENST00000530784 ACADLP28330 430 aa6.28□□□□□ -1.4
CSDE1-213ENST00000530784 SERPINB6P35237 376 aa6.28□□□□□ -1.4
CSDE1-213ENST00000530784 UGT1A3P35503 534 aa6.28□□□□□ -1.4
CSDE1-213ENST00000530784 GPR1P46091 355 aa6.28□□□□□ -1.4
CSDE1-213ENST00000530784 CDH6P55285 790 aa6.28□□□□□ -1.4
CSDE1-213ENST00000530784 MAXP61244 160 aa6.28□□□□□ -1.4
CSDE1-213ENST00000530784 DPYSL2Q16555 572 aa6.28□□□□□ -1.4
CSDE1-213ENST00000530784 STX1AQ16623 288 aa6.28□□□□□ -1.4
CSDE1-213ENST00000530784 DCAF12Q5T6F0 453 aa6.28□□□□□ -1.4
CSDE1-213ENST00000530784 GKAP1Q5VSY0 366 aaPredicted RBP6.28□□□□□ -1.4
CSDE1-213ENST00000530784 MARC1Q5VT66 337 aa6.28□□□□□ -1.4
CSDE1-213ENST00000530784 NKAIN2Q5VXU1 208 aa6.28□□□□□ -1.4
CSDE1-213ENST00000530784 CEACAM20Q6UY09 585 aa6.28□□□□□ -1.4
CSDE1-213ENST00000530784 RBM43Q6ZSC3 357 aaKnown RBP6.28□□□□□ -1.4
CSDE1-213ENST00000530784 GALNT13Q8IUC8 556 aa6.28□□□□□ -1.4
CSDE1-213ENST00000530784 NDUFAF2Q8N183 169 aa6.28□□□□□ -1.4
CSDE1-213ENST00000530784 GCSAMQ8N6F7 178 aa6.28□□□□□ -1.4
CSDE1-213ENST00000530784 OR10G6Q8NH81 332 aa6.28□□□□□ -1.4
CSDE1-213ENST00000530784 KIAA1143Q96AT1 154 aaPredicted RBP6.28□□□□□ -1.4
CSDE1-213ENST00000530784 ZNF653Q96CK0 615 aa6.28□□□□□ -1.4
CSDE1-213ENST00000530784 AP2M1Q96CW1 435 aa6.28□□□□□ -1.4
CSDE1-213ENST00000530784 ELMOD3Q96FG2 381 aa6.28□□□□□ -1.4
CSDE1-213ENST00000530784 STAMBPL1Q96FJ0 436 aa6.28□□□□□ -1.4
CSDE1-213ENST00000530784 CMTM3Q96MX0 182 aa6.28□□□□□ -1.4
CSDE1-213ENST00000530784 F2RL3Q96RI0 385 aa6.28□□□□□ -1.4
CSDE1-213ENST00000530784 MCCC1Q96RQ3 725 aaPredicted RBP6.28□□□□□ -1.4
CSDE1-213ENST00000530784 TRIM7Q9C029 511 aa6.28□□□□□ -1.4
CSDE1-213ENST00000530784 MRPL47Q9HD33 250 aaKnown RBP6.28□□□□□ -1.4
CSDE1-213ENST00000530784 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.28□□□□□ -1.4
CSDE1-213ENST00000530784 ANO10Q9NW15 660 aa6.28□□□□□ -1.4
CSDE1-213ENST00000530784 SLC39A1Q9NY26 324 aa6.28□□□□□ -1.4
CSDE1-213ENST00000530784 TMEM184BQ9Y519 407 aaPredicted RBP6.28□□□□□ -1.4
CSDE1-213ENST00000530784 TDRD6O60522 2096 aaKnown RBP6.28□□□□□ -1.4
CSDE1-213ENST00000530784 SOD1P00441 154 aa6.27□□□□□ -1.41
CSDE1-213ENST00000530784 CGAP01215 116 aa6.27□□□□□ -1.41
CSDE1-213ENST00000530784 MYBL1P10243 752 aa6.27□□□□□ -1.41
CSDE1-213ENST00000530784 ZNF30P17039 623 aa6.27□□□□□ -1.41
CSDE1-213ENST00000530784 PCK1P35558 622 aa6.27□□□□□ -1.41
CSDE1-213ENST00000530784 CCR10P46092 362 aa6.27□□□□□ -1.41
CSDE1-213ENST00000530784 CD81P60033 236 aa6.27□□□□□ -1.41
CSDE1-213ENST00000530784 PYCR3Q53H96 274 aa6.27□□□□□ -1.41
CSDE1-213ENST00000530784 WDR38Q5JTN6 314 aa6.27□□□□□ -1.41
CSDE1-213ENST00000530784 LRRC66Q68CR7 880 aa6.27□□□□□ -1.41
CSDE1-213ENST00000530784 APTXQ7Z2E3 356 aaKnown RBP6.27□□□□□ -1.41
CSDE1-213ENST00000530784 SFRP1Q8N474 314 aa6.27□□□□□ -1.41
CSDE1-213ENST00000530784 ZNF564Q8TBZ8 553 aaPredicted RBP6.27□□□□□ -1.41
CSDE1-213ENST00000530784 SLC37A2Q8TED4 501 aa6.27□□□□□ -1.41
CSDE1-213ENST00000530784 TRPC4APQ8TEL6 797 aa6.27□□□□□ -1.41
CSDE1-213ENST00000530784 PGAM5Q96HS1 289 aa6.27□□□□□ -1.41
CSDE1-213ENST00000530784 CATSPER2Q96P56 530 aa6.27□□□□□ -1.41
CSDE1-213ENST00000530784 CSPG4P5Q96PW8 444 aa6.27□□□□□ -1.41
CSDE1-213ENST00000530784 GFI1Q99684 422 aa6.27□□□□□ -1.41
CSDE1-213ENST00000530784 POLR1EQ9GZS1 481 aaKnown RBP6.27□□□□□ -1.41
CSDE1-213ENST00000530784 HAUS4Q9H6D7 363 aa6.27□□□□□ -1.41
CSDE1-213ENST00000530784 GPN2Q9H9Y4 310 aaPredicted RBP6.27□□□□□ -1.41
CSDE1-213ENST00000530784 ETNK2Q9NVF9 386 aa6.27□□□□□ -1.41
CSDE1-213ENST00000530784 HAUS2Q9NVX0 235 aa6.27□□□□□ -1.41
CSDE1-213ENST00000530784 TMEM9Q9P0T7 183 aa6.27□□□□□ -1.41
CSDE1-213ENST00000530784 CD84Q9UIB8 345 aa6.27□□□□□ -1.41
CSDE1-213ENST00000530784 DNPEPQ9ULA0 475 aa6.27□□□□□ -1.41
CSDE1-213ENST00000530784 SESN1Q9Y6P5 492 aa6.27□□□□□ -1.41
CSDE1-213ENST00000530784 KNTC1P50748 2209 aa6.27□□□□□ -1.41
CSDE1-213ENST00000530784 ANKRD36A6QL64 1941 aa6.27□□□□□ -1.41
CSDE1-213ENST00000530784 FLNBO75369 2602 aaKnown RBP6.27□□□□□ -1.41
CSDE1-213ENST00000530784 ASXL3Q9C0F0 2248 aa6.26□□□□□ -1.41
CSDE1-213ENST00000530784 A0A0G2JNG1 304 aa6.26□□□□□ -1.41
CSDE1-213ENST00000530784 A0A0J9YYE9 177 aa6.26□□□□□ -1.41
CSDE1-213ENST00000530784 A0A0U1RQS6 177 aa6.26□□□□□ -1.41
CSDE1-213ENST00000530784 A8MU76 341 aa6.26□□□□□ -1.41
CSDE1-213ENST00000530784 SMAD9O15198 467 aaKnown RBP6.26□□□□□ -1.41
CSDE1-213ENST00000530784 INPP4BO15327 924 aa6.26□□□□□ -1.41
CSDE1-213ENST00000530784 BUD23O43709 281 aaKnown RBP6.26□□□□□ -1.41
CSDE1-213ENST00000530784 PTP4A3O75365 173 aa6.26□□□□□ -1.41
CSDE1-213ENST00000530784 PDE9AO76083 593 aa6.26□□□□□ -1.41
CSDE1-213ENST00000530784 TRBC1P01850 177 aa6.26□□□□□ -1.41
CSDE1-213ENST00000530784 APOHP02749 345 aaPredicted RBP6.26□□□□□ -1.41
CSDE1-213ENST00000530784 HIST1H2ABP04908 130 aa6.26□□□□□ -1.41
CSDE1-213ENST00000530784 PRKAR1AP10644 381 aa6.26□□□□□ -1.41
CSDE1-213ENST00000530784 GZMAP12544 262 aa6.26□□□□□ -1.41
CSDE1-213ENST00000530784 TCF4P15884 667 aa6.26□□□□□ -1.41
CSDE1-213ENST00000530784 HIST1H2ADP20671 130 aa6.26□□□□□ -1.41
CSDE1-213ENST00000530784 CA4P22748 312 aa6.26□□□□□ -1.41
CSDE1-213ENST00000530784 CTSCP53634 463 aa6.26□□□□□ -1.41
CSDE1-213ENST00000530784 ATP12AP54707 1039 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms