RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 ACSM2BQ68CK6 577 aa19.07■□□□□ 0.64
SMPD1-204ENST00000530395 FAM180BQ6P0A1 224 aa19.07■□□□□ 0.64
SMPD1-204ENST00000530395 IFT20Q8IY31 132 aa19.07■□□□□ 0.64
SMPD1-204ENST00000530395 FAM83FQ8NEG4 500 aaPredicted RBP19.07■□□□□ 0.64
SMPD1-204ENST00000530395 RNASE6Q93091 150 aaKnown RBP19.07■□□□□ 0.64
SMPD1-204ENST00000530395 NTNG2Q96CW9 530 aa19.07■□□□□ 0.64
SMPD1-204ENST00000530395 TMCO6Q96DC7 493 aa19.07■□□□□ 0.64
SMPD1-204ENST00000530395 ERP27Q96DN0 273 aa19.07■□□□□ 0.64
SMPD1-204ENST00000530395 DTNBP1Q96EV8 351 aa19.07■□□□□ 0.64
SMPD1-204ENST00000530395 TRIB1Q96RU8 372 aa19.07■□□□□ 0.64
SMPD1-204ENST00000530395 NODALQ96S42 347 aa19.07■□□□□ 0.64
SMPD1-204ENST00000530395 EHD3Q9NZN3 535 aa19.07■□□□□ 0.64
SMPD1-204ENST00000530395 HEY2Q9UBP5 337 aa19.07■□□□□ 0.64
SMPD1-204ENST00000530395 FETUBQ9UGM5 382 aa19.07■□□□□ 0.64
SMPD1-204ENST00000530395 DLGAP4Q9Y2H0 992 aa19.07■□□□□ 0.64
SMPD1-204ENST00000530395 MTORP42345 2549 aa19.06■□□□□ 0.64
SMPD1-204ENST00000530395 KIF2AO00139 706 aaPredicted RBP19.06■□□□□ 0.64
SMPD1-204ENST00000530395 TO15178 435 aa19.06■□□□□ 0.64
SMPD1-204ENST00000530395 RIPK2O43353 540 aa19.06■□□□□ 0.64
SMPD1-204ENST00000530395 UGT2B11O75310 529 aa19.06■□□□□ 0.64
SMPD1-204ENST00000530395 ENO1P06733 434 aaKnown RBP19.06■□□□□ 0.64
SMPD1-204ENST00000530395 GCAP28676 217 aa19.06■□□□□ 0.64
SMPD1-204ENST00000530395 DNAJA1P31689 397 aaKnown RBP19.06■□□□□ 0.64
SMPD1-204ENST00000530395 EMDP50402 254 aa19.06■□□□□ 0.64
SMPD1-204ENST00000530395 ART1P52961 327 aa19.06■□□□□ 0.64
SMPD1-204ENST00000530395 PKNOX1P55347 436 aa19.06■□□□□ 0.64
SMPD1-204ENST00000530395 PSPHP78330 225 aa19.06■□□□□ 0.64
SMPD1-204ENST00000530395 ERCC6LQ2NKX8 1250 aa19.06■□□□□ 0.64
SMPD1-204ENST00000530395 FBXL19-AS1Q494R0 122 aa19.06■□□□□ 0.64
SMPD1-204ENST00000530395 ZNF628Q5EBL2 1059 aa19.06■□□□□ 0.64
SMPD1-204ENST00000530395 YRDCQ86U90 279 aaKnown RBP19.06■□□□□ 0.64
SMPD1-204ENST00000530395 CCDC116Q8IYX3 515 aa19.06■□□□□ 0.64
SMPD1-204ENST00000530395 SIMC1Q8NDZ2 872 aa19.06■□□□□ 0.64
SMPD1-204ENST00000530395 ACMSDQ8TDX5 336 aa19.06■□□□□ 0.64
SMPD1-204ENST00000530395 EXOSC8Q96B26 276 aaKnown RBP19.06■□□□□ 0.64
SMPD1-204ENST00000530395 WDYHV1Q96HA8 205 aa19.06■□□□□ 0.64
SMPD1-204ENST00000530395 COL21A1Q96P44 957 aa19.06■□□□□ 0.64
SMPD1-204ENST00000530395 SH3GL2Q99962 352 aa19.06■□□□□ 0.64
SMPD1-204ENST00000530395 POLDIP3Q9BY77 421 aaKnown RBP19.06■□□□□ 0.64
SMPD1-204ENST00000530395 ACPTQ9BZG2 426 aa19.06■□□□□ 0.64
SMPD1-204ENST00000530395 GALNT9Q9HCQ5 603 aa19.06■□□□□ 0.64
SMPD1-204ENST00000530395 MAPRE3Q9UPY8 281 aa19.06■□□□□ 0.64
SMPD1-204ENST00000530395 GPR55Q9Y2T6 319 aaPredicted RBP19.06■□□□□ 0.64
SMPD1-204ENST00000530395 AKAP6Q13023 2319 aa19.05■□□□□ 0.64
SMPD1-204ENST00000530395 KIAA1549Q9HCM3 1950 aa19.05■□□□□ 0.64
SMPD1-204ENST00000530395 OR6C70A6NIJ9 312 aa19.05■□□□□ 0.64
SMPD1-204ENST00000530395 KDM4EB2RXH2 506 aaPredicted RBP19.05■□□□□ 0.64
SMPD1-204ENST00000530395 ABCB7O75027 752 aa19.05■□□□□ 0.64
SMPD1-204ENST00000530395 CTAG2O75638 210 aa19.05■□□□□ 0.64
SMPD1-204ENST00000530395 CBR3O75828 277 aa19.05■□□□□ 0.64
SMPD1-204ENST00000530395 GSTA1P08263 222 aa19.05■□□□□ 0.64
SMPD1-204ENST00000530395 CYP4B1P13584 511 aa19.05■□□□□ 0.64
SMPD1-204ENST00000530395 CHN1P15882 459 aa19.05■□□□□ 0.64
SMPD1-204ENST00000530395 TIA1P31483 386 aaKnown RBP eCLIP19.05■□□□□ 0.64
SMPD1-204ENST00000530395 KRT20P35900 424 aa19.05■□□□□ 0.64
SMPD1-204ENST00000530395 ZNF136P52737 540 aa19.05■□□□□ 0.64
SMPD1-204ENST00000530395 PRKAA2P54646 552 aa19.05■□□□□ 0.64
SMPD1-204ENST00000530395 NAGLUP54802 743 aa19.05■□□□□ 0.64
SMPD1-204ENST00000530395 SNTB1Q13884 538 aaKnown RBP19.05■□□□□ 0.64
SMPD1-204ENST00000530395 FLYWCH1Q4VC44 716 aa19.05■□□□□ 0.64
SMPD1-204ENST00000530395 DCST1Q5T197 706 aa19.05■□□□□ 0.64
SMPD1-204ENST00000530395 FAM219BQ5XKK7 198 aa19.05■□□□□ 0.64
SMPD1-204ENST00000530395 DESI1Q6ICB0 168 aa19.05■□□□□ 0.64
SMPD1-204ENST00000530395 OR14L1PQ8NHC6 308 aa19.05■□□□□ 0.64
SMPD1-204ENST00000530395 TMBIM1Q969X1 311 aa19.05■□□□□ 0.64
SMPD1-204ENST00000530395 L3HYPDHQ96EM0 354 aa19.05■□□□□ 0.64
SMPD1-204ENST00000530395 BTBD9Q96Q07 612 aa19.05■□□□□ 0.64
SMPD1-204ENST00000530395 SHCBP1LQ9BZQ2 653 aa19.05■□□□□ 0.64
SMPD1-204ENST00000530395 CALHM2Q9HA72 323 aa19.05■□□□□ 0.64
SMPD1-204ENST00000530395 SERHLQ9NQF3 203 aa19.05■□□□□ 0.64
SMPD1-204ENST00000530395 CRIM1Q9NZV1 1036 aa19.05■□□□□ 0.64
SMPD1-204ENST00000530395 SENP1Q9P0U3 644 aa19.05■□□□□ 0.64
SMPD1-204ENST00000530395 PSMC3IPQ9P2W1 217 aaPredicted RBP19.05■□□□□ 0.64
SMPD1-204ENST00000530395 EXO1Q9UQ84 846 aaKnown RBP19.05■□□□□ 0.64
SMPD1-204ENST00000530395 ZFHX3Q15911 3703 aa19.04■□□□□ 0.64
SMPD1-204ENST00000530395 C2orf72A6NCS6 295 aa19.04■□□□□ 0.64
SMPD1-204ENST00000530395 MBD3L4A6NDZ8 208 aaPredicted RBP19.04■□□□□ 0.64
SMPD1-204ENST00000530395 MBD3L3A6NE82 208 aaPredicted RBP19.04■□□□□ 0.64
SMPD1-204ENST00000530395 MBD3L5A6NJ08 208 aaPredicted RBP19.04■□□□□ 0.64
SMPD1-204ENST00000530395 REM1O75628 298 aa19.04■□□□□ 0.64
SMPD1-204ENST00000530395 OPRM1P35372 400 aa19.04■□□□□ 0.64
SMPD1-204ENST00000530395 SOX18P35713 384 aa19.04■□□□□ 0.64
SMPD1-204ENST00000530395 PTGDSP41222 190 aa19.04■□□□□ 0.64
SMPD1-204ENST00000530395 GSTM5P46439 218 aa19.04■□□□□ 0.64
SMPD1-204ENST00000530395 RAE1P78406 368 aaKnown RBP19.04■□□□□ 0.64
SMPD1-204ENST00000530395 ENPP6Q6UWR7 440 aa19.04■□□□□ 0.64
SMPD1-204ENST00000530395 CEP112Q8N8E3 955 aa19.04■□□□□ 0.64
SMPD1-204ENST00000530395 OR9A2Q8NGT5 310 aa19.04■□□□□ 0.64
SMPD1-204ENST00000530395 MBD3L2Q8NHZ7 208 aaPredicted RBP19.04■□□□□ 0.64
SMPD1-204ENST00000530395 ZPLD1Q8TCW7 415 aa19.04■□□□□ 0.64
SMPD1-204ENST00000530395 C16orf78Q8WTQ4 265 aa19.04■□□□□ 0.64
SMPD1-204ENST00000530395 FAM222BQ8WU58 562 aa19.04■□□□□ 0.64
SMPD1-204ENST00000530395 NINJ1Q92982 152 aa19.04■□□□□ 0.64
SMPD1-204ENST00000530395 MED12Q93074 2177 aa19.04■□□□□ 0.64
SMPD1-204ENST00000530395 APIPQ96GX9 242 aa19.04■□□□□ 0.64
SMPD1-204ENST00000530395 GPATCH1Q9BRR8 931 aaKnown RBP19.04■□□□□ 0.64
SMPD1-204ENST00000530395 CLEC4MQ9H2X3 399 aaPredicted RBP19.04■□□□□ 0.64
SMPD1-204ENST00000530395 EDARQ9UNE0 448 aa19.04■□□□□ 0.64
SMPD1-204ENST00000530395 H0Y3Z8 333 aa19.03■□□□□ 0.64
SMPD1-204ENST00000530395 GOLGA8RI6L899 631 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms