RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 CPTPQ5TA50 214 aa11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 GFRALQ6UXV0 394 aa11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 FAM47EQ6ZV65 393 aa11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 PRR22Q8IZ63 422 aa11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 FBXW8Q8N3Y1 598 aa11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 KRTCAP2Q8N6L1 136 aa11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 NATD1Q8N6N6 113 aa11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 FAM13CQ8NE31 585 aa11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 OR5M3Q8NGP4 307 aa11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 NUDT8Q8WV74 236 aa11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 GPR137Q96N19 417 aa11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 SECISBP2Q96T21 854 aaKnown RBP11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 PRPF18Q99633 342 aaKnown RBP11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 TSPAN10Q9H1Z9 355 aaPredicted RBP11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 PROK2Q9HC23 129 aa11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 DDX18Q9NVP1 670 aaKnown RBP11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 ZNF446Q9NWS9 450 aa11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 MARCOQ9UEW3 520 aaPredicted RBP11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 CNOT11Q9UKZ1 510 aaKnown RBP11.66□□□□□ -0.54
CCDC90B-216ENST00000529856 POLEQ07864 2286 aa11.65□□□□□ -0.54
CCDC90B-216ENST00000529856 NINQ8N4C6 2090 aa11.65□□□□□ -0.54
CCDC90B-216ENST00000529856 A0A1W2PRB8 838 aa11.65□□□□□ -0.54
CCDC90B-216ENST00000529856 ANKRD33BA6NCL7 494 aa11.65□□□□□ -0.54
CCDC90B-216ENST00000529856 PPM1BO75688 479 aa11.65□□□□□ -0.54
CCDC90B-216ENST00000529856 GLSO94925 669 aaPredicted RBP11.65□□□□□ -0.54
CCDC90B-216ENST00000529856 GPC1P35052 558 aa11.65□□□□□ -0.54
CCDC90B-216ENST00000529856 DNASE1L1P49184 302 aa11.65□□□□□ -0.54
CCDC90B-216ENST00000529856 CORO7P57737 925 aa11.65□□□□□ -0.54
CCDC90B-216ENST00000529856 FOXO1Q12778 655 aa11.65□□□□□ -0.54
CCDC90B-216ENST00000529856 UBAP2LQ14157 1087 aaKnown RBP11.65□□□□□ -0.54
CCDC90B-216ENST00000529856 MLC1Q15049 377 aa11.65□□□□□ -0.54
CCDC90B-216ENST00000529856 RPS6KA2Q15349 733 aa11.65□□□□□ -0.54
CCDC90B-216ENST00000529856 LCE2DQ5TA82 110 aaPredicted RBP11.65□□□□□ -0.54
CCDC90B-216ENST00000529856 OGFOD2Q6N063 350 aa11.65□□□□□ -0.54
CCDC90B-216ENST00000529856 BNC2Q6ZN30 1099 aaPredicted RBP11.65□□□□□ -0.54
CCDC90B-216ENST00000529856 RGS9BPQ6ZS82 235 aa11.65□□□□□ -0.54
CCDC90B-216ENST00000529856 GK5Q6ZS86 529 aa11.65□□□□□ -0.54
CCDC90B-216ENST00000529856 NUP54Q7Z3B4 507 aa11.65□□□□□ -0.54
CCDC90B-216ENST00000529856 SLC34A3Q8N130 599 aa11.65□□□□□ -0.54
CCDC90B-216ENST00000529856 PIWIL2Q8TC59 973 aaKnown RBP11.65□□□□□ -0.54
CCDC90B-216ENST00000529856 SPPL2AQ8TCT8 520 aa11.65□□□□□ -0.54
CCDC90B-216ENST00000529856 OMA1Q96E52 524 aa11.65□□□□□ -0.54
CCDC90B-216ENST00000529856 MAGED4Q96JG8 741 aa11.65□□□□□ -0.54
CCDC90B-216ENST00000529856 WDR55Q9H6Y2 383 aaPredicted RBP11.65□□□□□ -0.54
CCDC90B-216ENST00000529856 IL1RL2Q9HB29 575 aa11.65□□□□□ -0.54
CCDC90B-216ENST00000529856 ATAD3AQ9NVI7 634 aa11.65□□□□□ -0.54
CCDC90B-216ENST00000529856 NTMQ9P121 344 aa11.65□□□□□ -0.54
CCDC90B-216ENST00000529856 MAPRE3Q9UPY8 281 aa11.65□□□□□ -0.54
CCDC90B-216ENST00000529856 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.65□□□□□ -0.54
CCDC90B-216ENST00000529856 EXPH5Q8NEV8 1989 aa11.65□□□□□ -0.55
CCDC90B-216ENST00000529856 FLNCQ14315 2725 aa11.64□□□□□ -0.55
CCDC90B-216ENST00000529856 ZNF195O14628 629 aa11.64□□□□□ -0.55
CCDC90B-216ENST00000529856 TFECO14948 347 aaPredicted RBP11.64□□□□□ -0.55
CCDC90B-216ENST00000529856 HS6ST1O60243 411 aa11.64□□□□□ -0.55
CCDC90B-216ENST00000529856 EFNA1P20827 205 aaPredicted RBP11.64□□□□□ -0.55
CCDC90B-216ENST00000529856 CDK9P50750 372 aaKnown RBP11.64□□□□□ -0.55
CCDC90B-216ENST00000529856 PPIAP62937 165 aaKnown RBP11.64□□□□□ -0.55
CCDC90B-216ENST00000529856 PSPHP78330 225 aa11.64□□□□□ -0.55
CCDC90B-216ENST00000529856 RPP38P78345 283 aaKnown RBP11.64□□□□□ -0.55
CCDC90B-216ENST00000529856 PSG6Q00889 435 aa11.64□□□□□ -0.55
CCDC90B-216ENST00000529856 PLGLB1Q02325 96 aa11.64□□□□□ -0.55
CCDC90B-216ENST00000529856 PLCXD2Q0VAA5 305 aa11.64□□□□□ -0.55
CCDC90B-216ENST00000529856 ZNF155Q12901 538 aaPredicted RBP11.64□□□□□ -0.55
CCDC90B-216ENST00000529856 HYAL4Q2M3T9 481 aa11.64□□□□□ -0.55
CCDC90B-216ENST00000529856 TBCELQ5QJ74 424 aa11.64□□□□□ -0.55
CCDC90B-216ENST00000529856 PRAMEF20Q5VT98 475 aa11.64□□□□□ -0.55
CCDC90B-216ENST00000529856 NPSR1Q6W5P4 371 aa11.64□□□□□ -0.55
CCDC90B-216ENST00000529856 SPATA19Q7Z5L4 167 aa11.64□□□□□ -0.55
CCDC90B-216ENST00000529856 CAMKMTQ7Z624 323 aa11.64□□□□□ -0.55
CCDC90B-216ENST00000529856 SLC44A2Q8IWA5 706 aaPredicted RBP11.64□□□□□ -0.55
CCDC90B-216ENST00000529856 FAM26EQ8N5C1 309 aa11.64□□□□□ -0.55
CCDC90B-216ENST00000529856 CEP70Q8NHQ1 597 aa11.64□□□□□ -0.55
CCDC90B-216ENST00000529856 LRRC8CQ8TDW0 803 aa11.64□□□□□ -0.55
CCDC90B-216ENST00000529856 OR5P2Q8WZ92 322 aa11.64□□□□□ -0.55
CCDC90B-216ENST00000529856 DIO2Q92813 273 aa11.64□□□□□ -0.55
CCDC90B-216ENST00000529856 HGDQ93099 445 aa11.64□□□□□ -0.55
CCDC90B-216ENST00000529856 TMBIM1Q969X1 311 aa11.64□□□□□ -0.55
CCDC90B-216ENST00000529856 NTNG2Q96CW9 530 aa11.64□□□□□ -0.55
CCDC90B-216ENST00000529856 MAELQ96JY0 434 aaKnown RBP11.64□□□□□ -0.55
CCDC90B-216ENST00000529856 C7orf26Q96N11 449 aa11.64□□□□□ -0.55
CCDC90B-216ENST00000529856 DUSP26Q9BV47 211 aa11.64□□□□□ -0.55
CCDC90B-216ENST00000529856 ANGPTL4Q9BY76 406 aa11.64□□□□□ -0.55
CCDC90B-216ENST00000529856 TTTY12Q9BZ98 90 aa11.64□□□□□ -0.55
CCDC90B-216ENST00000529856 DPY30Q9C005 99 aa11.64□□□□□ -0.55
CCDC90B-216ENST00000529856 BHLHE41Q9C0J9 482 aaPredicted RBP11.64□□□□□ -0.55
CCDC90B-216ENST00000529856 ACBD3Q9H3P7 528 aa11.64□□□□□ -0.55
CCDC90B-216ENST00000529856 C3orf14Q9HBI5 128 aa11.64□□□□□ -0.55
CCDC90B-216ENST00000529856 INTS9Q9NV88 658 aaKnown RBP11.64□□□□□ -0.55
CCDC90B-216ENST00000529856 TUBA8Q9NY65 449 aaPredicted RBP11.64□□□□□ -0.55
CCDC90B-216ENST00000529856 OSGIN2Q9Y236 505 aa11.64□□□□□ -0.55
CCDC90B-216ENST00000529856 GOLGA8QA0A0J9YX86 632 aa11.63□□□□□ -0.55
CCDC90B-216ENST00000529856 GOLGA8OA6NCC3 632 aa11.63□□□□□ -0.55
CCDC90B-216ENST00000529856 OR6C70A6NIJ9 312 aa11.63□□□□□ -0.55
CCDC90B-216ENST00000529856 TTC36A6NLP5 189 aa11.63□□□□□ -0.55
CCDC90B-216ENST00000529856 FAM166BA8MTA8 275 aa11.63□□□□□ -0.55
CCDC90B-216ENST00000529856 GOLGA8NF8WBI6 632 aa11.63□□□□□ -0.55
CCDC90B-216ENST00000529856 ACOT7O00154 380 aa11.63□□□□□ -0.55
CCDC90B-216ENST00000529856 ANKRD28O15084 1053 aa11.63□□□□□ -0.55
CCDC90B-216ENST00000529856 EMC8O43402 210 aa11.63□□□□□ -0.55
CCDC90B-216ENST00000529856 TSPAN2O60636 221 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms