RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 PCDHGA11Q9Y5H2 935 aa8.14□□□□□ -1.11
VPS11-203ENST00000529545 MED12Q93074 2177 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 PRAMEF25A6NGN4 478 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 K7EPI3 171 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 ACOX3O15254 700 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 EMC8O43402 210 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 HCRTR2O43614 444 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 EEDO75530 441 aaKnown RBP8.13□□□□□ -1.11
VPS11-203ENST00000529545 AIFM1O95831 613 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 TGM6O95932 706 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 CD1DP15813 335 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 PPP3CBP16298 524 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 ZNF708P17019 499 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 GPX3P22352 226 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 CNTFP26441 200 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 SRD5A2P31213 254 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 LHX2P50458 406 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 XKP51811 444 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 NR1H2P55055 460 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 GFRA1P56159 465 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 ARL4CP56559 192 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 CLDN18P56856 261 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 SIRPAP78324 504 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 PLCXD2Q0VAA5 305 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 POU4F2Q12837 409 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 MORF4L2Q15014 288 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 OR4D1Q15615 310 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 ETFDHQ16134 617 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 NNATQ16517 81 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 BCL2A1Q16548 175 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 CLEC12BQ2HXU8 276 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 MRM1Q6IN84 353 aaKnown RBP8.13□□□□□ -1.11
VPS11-203ENST00000529545 GRHL2Q6ISB3 625 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 VWA1Q6PCB0 445 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 ZNF474Q6S9Z5 364 aaPredicted RBP8.13□□□□□ -1.11
VPS11-203ENST00000529545 MILR1Q7Z6M3 343 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 NUDT13Q86X67 352 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 RNF175Q8N4F7 328 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 GBP7Q8N8V2 638 aaPredicted RBP8.13□□□□□ -1.11
VPS11-203ENST00000529545 WDSUB1Q8N9V3 476 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 OR4K14Q8NGD5 310 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 STAG3L4Q8TBR4 150 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 HGDQ93099 445 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 CTHRC1Q96CG8 243 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 OMA1Q96E52 524 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 TRMT61AQ96FX7 289 aaKnown RBP8.13□□□□□ -1.11
VPS11-203ENST00000529545 LCORQ96JN0 433 aaPredicted RBP8.13□□□□□ -1.11
VPS11-203ENST00000529545 NODALQ96S42 347 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 G6PC3Q9BUM1 346 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 KLHL4Q9C0H6 718 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 NXF5Q9H1B4 397 aaKnown RBP8.13□□□□□ -1.11
VPS11-203ENST00000529545 DDX31Q9H8H2 851 aaKnown RBP8.13□□□□□ -1.11
VPS11-203ENST00000529545 PLAC1Q9HBJ0 212 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 FANCFQ9NPI8 374 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 YAE1D1Q9NRH1 226 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 NUDT4Q9NZJ9 180 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 BCAP29Q9UHQ4 241 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 PROCRQ9UNN8 238 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 MRPS18CQ9Y3D5 142 aaKnown RBP8.13□□□□□ -1.11
VPS11-203ENST00000529545 JRKLQ9Y4A0 524 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 WIF1Q9Y5W5 379 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 TEX264Q9Y6I9 313 aa8.13□□□□□ -1.11
VPS11-203ENST00000529545 RAI1Q7Z5J4 1906 aaPredicted RBP8.13□□□□□ -1.11
VPS11-203ENST00000529545 A0A0A6YYD5 115 aa8.12□□□□□ -1.11
VPS11-203ENST00000529545 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.12□□□□□ -1.11
VPS11-203ENST00000529545 LRRC14BA6NHZ5 514 aa8.12□□□□□ -1.11
VPS11-203ENST00000529545 GOLGA6L10A6NI86 522 aa8.12□□□□□ -1.11
VPS11-203ENST00000529545 SUPT3HB4E1H0 165 aa8.12□□□□□ -1.11
VPS11-203ENST00000529545 PHGDHO43175 533 aaKnown RBP8.12□□□□□ -1.11
VPS11-203ENST00000529545 TMPRSS11DO60235 418 aa8.12□□□□□ -1.11
VPS11-203ENST00000529545 SUPT3HO75486 399 aa8.12□□□□□ -1.11
VPS11-203ENST00000529545 ALDOAP04075 364 aaKnown RBP8.12□□□□□ -1.11
VPS11-203ENST00000529545 CT62P0C5K7 136 aa8.12□□□□□ -1.11
VPS11-203ENST00000529545 CD8BP10966 210 aa8.12□□□□□ -1.11
VPS11-203ENST00000529545 PEPDP12955 493 aa8.12□□□□□ -1.11
VPS11-203ENST00000529545 PORP16435 677 aaPredicted RBP8.12□□□□□ -1.11
VPS11-203ENST00000529545 STMN1P16949 149 aa8.12□□□□□ -1.11
VPS11-203ENST00000529545 TCEA1P23193 301 aaKnown RBP8.12□□□□□ -1.11
VPS11-203ENST00000529545 DPP4P27487 766 aa8.12□□□□□ -1.11
VPS11-203ENST00000529545 CDC25BP30305 580 aa8.12□□□□□ -1.11
VPS11-203ENST00000529545 IDUAP35475 653 aa8.12□□□□□ -1.11
VPS11-203ENST00000529545 BSGP35613 385 aa8.12□□□□□ -1.11
VPS11-203ENST00000529545 NEK2P51955 445 aa8.12□□□□□ -1.11
VPS11-203ENST00000529545 KRTAP1-1Q07627 177 aa8.12□□□□□ -1.11
VPS11-203ENST00000529545 CUL3Q13618 768 aa8.12□□□□□ -1.11
VPS11-203ENST00000529545 CHRFAM7AQ494W8 412 aa8.12□□□□□ -1.11
VPS11-203ENST00000529545 LIPJQ5W064 366 aa8.12□□□□□ -1.11
VPS11-203ENST00000529545 ANKRD34AQ69YU3 496 aa8.12□□□□□ -1.11
VPS11-203ENST00000529545 ZNF704Q6ZNC4 412 aaPredicted RBP8.12□□□□□ -1.11
VPS11-203ENST00000529545 SH2D5Q6ZV89 423 aa8.12□□□□□ -1.11
VPS11-203ENST00000529545 HIPK1Q86Z02 1210 aa8.12□□□□□ -1.11
VPS11-203ENST00000529545 ANKMY2Q8IV38 441 aa8.12□□□□□ -1.11
VPS11-203ENST00000529545 UBQLNLQ8IYU4 475 aa8.12□□□□□ -1.11
VPS11-203ENST00000529545 SVOPQ8N4V2 548 aa8.12□□□□□ -1.11
VPS11-203ENST00000529545 ZNF611Q8N823 705 aa8.12□□□□□ -1.11
VPS11-203ENST00000529545 MAPK1IP1LQ8NDC0 245 aa8.12□□□□□ -1.11
VPS11-203ENST00000529545 ADCY4Q8NFM4 1077 aa8.12□□□□□ -1.11
VPS11-203ENST00000529545 CDKL2Q92772 493 aa8.12□□□□□ -1.11
VPS11-203ENST00000529545 MARK4Q96L34 752 aa8.12□□□□□ -1.11
VPS11-203ENST00000529545 PIGQQ9BRB3 760 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms