RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 Q6ZPB1 254 aaPredicted RBP8.34□□□□□ -1.07
CMTM1-210ENST00000528441 ACAD11Q709F0 780 aa8.34□□□□□ -1.07
CMTM1-210ENST00000528441 TRILQ7L0X0 811 aa8.34□□□□□ -1.07
CMTM1-210ENST00000528441 WDR53Q7Z5U6 358 aaPredicted RBP8.34□□□□□ -1.07
CMTM1-210ENST00000528441 NUDCD3Q8IVD9 361 aa8.34□□□□□ -1.07
CMTM1-210ENST00000528441 SLC44A2Q8IWA5 706 aaPredicted RBP8.34□□□□□ -1.07
CMTM1-210ENST00000528441 HOMEZQ8IX15 550 aa8.34□□□□□ -1.07
CMTM1-210ENST00000528441 ZNF615Q8N8J6 731 aa8.34□□□□□ -1.07
CMTM1-210ENST00000528441 OR14L1PQ8NHC6 308 aa8.34□□□□□ -1.07
CMTM1-210ENST00000528441 SPPL2AQ8TCT8 520 aa8.34□□□□□ -1.07
CMTM1-210ENST00000528441 AENQ8WTP8 325 aaKnown RBP8.34□□□□□ -1.07
CMTM1-210ENST00000528441 TWIST2Q8WVJ9 160 aa8.34□□□□□ -1.07
CMTM1-210ENST00000528441 JADE3Q92613 823 aa8.34□□□□□ -1.07
CMTM1-210ENST00000528441 CAVIN3Q969G5 261 aa8.34□□□□□ -1.07
CMTM1-210ENST00000528441 TMBIM1Q969X1 311 aa8.34□□□□□ -1.07
CMTM1-210ENST00000528441 PPCDCQ96CD2 204 aa8.34□□□□□ -1.07
CMTM1-210ENST00000528441 PARD6BQ9BYG5 372 aa8.34□□□□□ -1.07
CMTM1-210ENST00000528441 ZNF703Q9H7S9 590 aaPredicted RBP8.34□□□□□ -1.07
CMTM1-210ENST00000528441 ANKRA2Q9H9E1 313 aa8.34□□□□□ -1.07
CMTM1-210ENST00000528441 FOLH1BQ9HBA9 442 aa8.34□□□□□ -1.07
CMTM1-210ENST00000528441 EQTNQ9NQ60 294 aa8.34□□□□□ -1.07
CMTM1-210ENST00000528441 MRTO4Q9UKD2 239 aaKnown RBP8.34□□□□□ -1.07
CMTM1-210ENST00000528441 CES1P1Q9UKY3 287 aa8.34□□□□□ -1.07
CMTM1-210ENST00000528441 DTX4Q9Y2E6 619 aa8.34□□□□□ -1.07
CMTM1-210ENST00000528441 ZNF835Q9Y2P0 537 aa8.34□□□□□ -1.07
CMTM1-210ENST00000528441 KLF2Q9Y5W3 355 aaPredicted RBP8.34□□□□□ -1.07
CMTM1-210ENST00000528441 PTGDR2Q9Y5Y4 395 aa8.34□□□□□ -1.07
CMTM1-210ENST00000528441 LRRK2Q5S007 2527 aa8.34□□□□□ -1.07
CMTM1-210ENST00000528441 ASH1LQ9NR48 2969 aaKnown RBP8.34□□□□□ -1.08
CMTM1-210ENST00000528441 POLEQ07864 2286 aa8.33□□□□□ -1.08
CMTM1-210ENST00000528441 OR14I1A6ND48 311 aa8.33□□□□□ -1.08
CMTM1-210ENST00000528441 FRG2CA6NGY1 282 aa8.33□□□□□ -1.08
CMTM1-210ENST00000528441 AQP7O14520 342 aa8.33□□□□□ -1.08
CMTM1-210ENST00000528441 SCO2O43819 266 aa8.33□□□□□ -1.08
CMTM1-210ENST00000528441 NPHS1O60500 1241 aa8.33□□□□□ -1.08
CMTM1-210ENST00000528441 HCN1O60741 890 aa8.33□□□□□ -1.08
CMTM1-210ENST00000528441 ERLIN1O75477 346 aa8.33□□□□□ -1.08
CMTM1-210ENST00000528441 CBX7O95931 251 aa8.33□□□□□ -1.08
CMTM1-210ENST00000528441 CLPSP04118 112 aa8.33□□□□□ -1.08
CMTM1-210ENST00000528441 CHRNGP07510 517 aa8.33□□□□□ -1.08
CMTM1-210ENST00000528441 H2AFXP16104 143 aaPredicted RBP8.33□□□□□ -1.08
CMTM1-210ENST00000528441 ACVR2AP27037 513 aa8.33□□□□□ -1.08
CMTM1-210ENST00000528441 GRNP28799 593 aaKnown RBP8.33□□□□□ -1.08
CMTM1-210ENST00000528441 MANFP55145 182 aaKnown RBP8.33□□□□□ -1.08
CMTM1-210ENST00000528441 DUSP2Q05923 314 aa8.33□□□□□ -1.08
CMTM1-210ENST00000528441 STX5Q13190 355 aa8.33□□□□□ -1.08
CMTM1-210ENST00000528441 EFR3AQ14156 821 aa8.33□□□□□ -1.08
CMTM1-210ENST00000528441 SPDYE7PQ495Y7 208 aa8.33□□□□□ -1.08
CMTM1-210ENST00000528441 ATP6AP1LQ52LC2 224 aa8.33□□□□□ -1.08
CMTM1-210ENST00000528441 ZNF628Q5EBL2 1059 aa8.33□□□□□ -1.08
CMTM1-210ENST00000528441 C1orf185Q5T7R7 199 aa8.33□□□□□ -1.08
CMTM1-210ENST00000528441 ANKRD26P1Q6NSI1 321 aa8.33□□□□□ -1.08
CMTM1-210ENST00000528441 IKBIPQ70UQ0 350 aa8.33□□□□□ -1.08
CMTM1-210ENST00000528441 LARP4Q71RC2 724 aaKnown RBP eCLIP8.33□□□□□ -1.08
CMTM1-210ENST00000528441 NUP54Q7Z3B4 507 aa8.33□□□□□ -1.08
CMTM1-210ENST00000528441 CLYBLQ8N0X4 340 aa8.33□□□□□ -1.08
CMTM1-210ENST00000528441 ANKRD42Q8N9B4 389 aa8.33□□□□□ -1.08
CMTM1-210ENST00000528441 BANPQ8N9N5 519 aa8.33□□□□□ -1.08
CMTM1-210ENST00000528441 FNDC5Q8NAU1 212 aa8.33□□□□□ -1.08
CMTM1-210ENST00000528441 OR4K17Q8NGC6 315 aa8.33□□□□□ -1.08
CMTM1-210ENST00000528441 FAM76AQ8TAV0 307 aa8.33□□□□□ -1.08
CMTM1-210ENST00000528441 ZNF675Q8TD23 568 aa8.33□□□□□ -1.08
CMTM1-210ENST00000528441 PHF10Q8WUB8 498 aaKnown RBP8.33□□□□□ -1.08
CMTM1-210ENST00000528441 ADIPOR1Q96A54 375 aa8.33□□□□□ -1.08
CMTM1-210ENST00000528441 EFHD2Q96C19 240 aaPredicted RBP8.33□□□□□ -1.08
CMTM1-210ENST00000528441 TUBGCP3Q96CW5 907 aa8.33□□□□□ -1.08
CMTM1-210ENST00000528441 LRRC46Q96FV0 321 aa8.33□□□□□ -1.08
CMTM1-210ENST00000528441 PKNOX2Q96KN3 472 aa8.33□□□□□ -1.08
CMTM1-210ENST00000528441 PPP1R36Q96LQ0 422 aa8.33□□□□□ -1.08
CMTM1-210ENST00000528441 PPP3R2Q96LZ3 170 aa8.33□□□□□ -1.08
CMTM1-210ENST00000528441 COL21A1Q96P44 957 aa8.33□□□□□ -1.08
CMTM1-210ENST00000528441 ADOQ96SZ5 270 aa8.33□□□□□ -1.08
CMTM1-210ENST00000528441 STMN4Q9H169 189 aaPredicted RBP8.33□□□□□ -1.08
CMTM1-210ENST00000528441 ZDHHC11Q9H8X9 412 aa8.33□□□□□ -1.08
CMTM1-210ENST00000528441 C3orf14Q9HBI5 128 aa8.33□□□□□ -1.08
CMTM1-210ENST00000528441 Q9N2J8 555 aa8.33□□□□□ -1.08
CMTM1-210ENST00000528441 MYNNQ9NPC7 610 aa8.33□□□□□ -1.08
CMTM1-210ENST00000528441 MKS1Q9NXB0 559 aa8.33□□□□□ -1.08
CMTM1-210ENST00000528441 CNOT11Q9UKZ1 510 aaKnown RBP8.33□□□□□ -1.08
CMTM1-210ENST00000528441 RAB21Q9UL25 225 aa8.33□□□□□ -1.08
CMTM1-210ENST00000528441 SLC6A5Q9Y345 797 aa8.33□□□□□ -1.08
CMTM1-210ENST00000528441 TRAF6Q9Y4K3 522 aa8.33□□□□□ -1.08
CMTM1-210ENST00000528441 CHCHD2Q9Y6H1 151 aaPredicted RBP8.33□□□□□ -1.08
CMTM1-210ENST00000528441 PRRC2CQ9Y520 2896 aaKnown RBP8.33□□□□□ -1.08
CMTM1-210ENST00000528441 DNAJC13O75165 2243 aa8.32□□□□□ -1.08
CMTM1-210ENST00000528441 ZNF407Q9C0G0 2248 aa8.32□□□□□ -1.08
CMTM1-210ENST00000528441 TMEM233B4DJY2 109 aa8.32□□□□□ -1.08
CMTM1-210ENST00000528441 FAM47E-STBD1D6RA91 191 aa8.32□□□□□ -1.08
CMTM1-210ENST00000528441 PIP5K1BO14986 540 aa8.32□□□□□ -1.08
CMTM1-210ENST00000528441 CFLARO15519 480 aa8.32□□□□□ -1.08
CMTM1-210ENST00000528441 GMFGO60234 142 aa8.32□□□□□ -1.08
CMTM1-210ENST00000528441 SUSD5O60279 629 aa8.32□□□□□ -1.08
CMTM1-210ENST00000528441 WDR1O75083 606 aa8.32□□□□□ -1.08
CMTM1-210ENST00000528441 PEX11AO75192 247 aa8.32□□□□□ -1.08
CMTM1-210ENST00000528441 NME6O75414 186 aaPredicted RBP8.32□□□□□ -1.08
CMTM1-210ENST00000528441 GLSO94925 669 aaPredicted RBP8.32□□□□□ -1.08
CMTM1-210ENST00000528441 KCNH1O95259 989 aa8.32□□□□□ -1.08
CMTM1-210ENST00000528441 ABCB1P08183 1280 aaPredicted RBP8.32□□□□□ -1.08
CMTM1-210ENST00000528441 RFPL3SP0C7P2 107 aa8.32□□□□□ -1.08
CMTM1-210ENST00000528441 GABRA1P14867 456 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms