RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 ESRRBO95718 433 aa12.99□□□□□ -0.33
CAPN1-212ENST00000527887 EPPINO95925 133 aa12.99□□□□□ -0.33
CAPN1-212ENST00000527887 GCKP35557 465 aa12.99□□□□□ -0.33
CAPN1-212ENST00000527887 TIMP3P35625 211 aa12.99□□□□□ -0.33
CAPN1-212ENST00000527887 ALDH9A1P49189 494 aa12.99□□□□□ -0.33
CAPN1-212ENST00000527887 ACSM2AQ08AH3 577 aa12.99□□□□□ -0.33
CAPN1-212ENST00000527887 ACSM2BQ68CK6 577 aa12.99□□□□□ -0.33
CAPN1-212ENST00000527887 FAM111BQ6SJ93 734 aa12.99□□□□□ -0.33
CAPN1-212ENST00000527887 TMEM64Q6YI46 380 aa12.99□□□□□ -0.33
CAPN1-212ENST00000527887 LACC1Q8IV20 430 aa12.99□□□□□ -0.33
CAPN1-212ENST00000527887 HOMEZQ8IX15 550 aa12.99□□□□□ -0.33
CAPN1-212ENST00000527887 OR1J4Q8NGS1 313 aa12.99□□□□□ -0.33
CAPN1-212ENST00000527887 CNRIP1Q96F85 164 aaPredicted RBP12.99□□□□□ -0.33
CAPN1-212ENST00000527887 GNRHR2Q96P88 292 aa12.99□□□□□ -0.33
CAPN1-212ENST00000527887 TIMP4Q99727 224 aa12.99□□□□□ -0.33
CAPN1-212ENST00000527887 ZNF559Q9BR84 538 aa12.99□□□□□ -0.33
CAPN1-212ENST00000527887 PRDM14Q9GZV8 571 aa12.99□□□□□ -0.33
CAPN1-212ENST00000527887 SLC6A15Q9H2J7 730 aa12.99□□□□□ -0.33
CAPN1-212ENST00000527887 METTL7AQ9H8H3 244 aa12.99□□□□□ -0.33
CAPN1-212ENST00000527887 GIMAP4Q9NUV9 329 aa12.99□□□□□ -0.33
CAPN1-212ENST00000527887 MKS1Q9NXB0 559 aa12.99□□□□□ -0.33
CAPN1-212ENST00000527887 ZNF629Q9UEG4 869 aaPredicted RBP12.99□□□□□ -0.33
CAPN1-212ENST00000527887 CCDC168Q8NDH2 2452 aa12.99□□□□□ -0.33
CAPN1-212ENST00000527887 C15orf38-AP3S2A0A0A6YYH1 394 aa12.98□□□□□ -0.33
CAPN1-212ENST00000527887 GNG14A0A1W2PPG7 69 aa12.98□□□□□ -0.33
CAPN1-212ENST00000527887 FRG2CA6NGY1 282 aa12.98□□□□□ -0.33
CAPN1-212ENST00000527887 OR6C70A6NIJ9 312 aa12.98□□□□□ -0.33
CAPN1-212ENST00000527887 PCDH7O60245 1069 aa12.98□□□□□ -0.33
CAPN1-212ENST00000527887 SLITRK5O94991 958 aa12.98□□□□□ -0.33
CAPN1-212ENST00000527887 CBX7O95931 251 aa12.98□□□□□ -0.33
CAPN1-212ENST00000527887 MPIP34949 423 aa12.98□□□□□ -0.33
CAPN1-212ENST00000527887 ADH7P40394 386 aa12.98□□□□□ -0.33
CAPN1-212ENST00000527887 TRPC1P48995 793 aa12.98□□□□□ -0.33
CAPN1-212ENST00000527887 EMDP50402 254 aa12.98□□□□□ -0.33
CAPN1-212ENST00000527887 GABPB1Q06547 395 aaPredicted RBP12.98□□□□□ -0.33
CAPN1-212ENST00000527887 CRYZQ08257 329 aaKnown RBP12.98□□□□□ -0.33
CAPN1-212ENST00000527887 FNDC7Q5VTL7 733 aa12.98□□□□□ -0.33
CAPN1-212ENST00000527887 VASNQ6EMK4 673 aa12.98□□□□□ -0.33
CAPN1-212ENST00000527887 OR52R1Q8NGF1 315 aa12.98□□□□□ -0.33
CAPN1-212ENST00000527887 HGDQ93099 445 aa12.98□□□□□ -0.33
CAPN1-212ENST00000527887 TMCO6Q96DC7 493 aa12.98□□□□□ -0.33
CAPN1-212ENST00000527887 OMA1Q96E52 524 aa12.98□□□□□ -0.33
CAPN1-212ENST00000527887 C11orf24Q96F05 449 aaPredicted RBP12.98□□□□□ -0.33
CAPN1-212ENST00000527887 ITPAQ9BY32 194 aa12.98□□□□□ -0.33
CAPN1-212ENST00000527887 ACPTQ9BZG2 426 aa12.98□□□□□ -0.33
CAPN1-212ENST00000527887 TBK1Q9UHD2 729 aa12.98□□□□□ -0.33
CAPN1-212ENST00000527887 FOXD3Q9UJU5 478 aaPredicted RBP12.98□□□□□ -0.33
CAPN1-212ENST00000527887 DLGAP4Q9Y2H0 992 aa12.98□□□□□ -0.33
CAPN1-212ENST00000527887 PLLPQ9Y342 182 aa12.98□□□□□ -0.33
CAPN1-212ENST00000527887 DNAJC13O75165 2243 aa12.98□□□□□ -0.33
CAPN1-212ENST00000527887 SYT5O00445 386 aa12.97□□□□□ -0.33
CAPN1-212ENST00000527887 DVL2O14641 736 aa12.97□□□□□ -0.33
CAPN1-212ENST00000527887 SHOX2O60902 331 aaPredicted RBP12.97□□□□□ -0.33
CAPN1-212ENST00000527887 GLRA3O75311 464 aa12.97□□□□□ -0.33
CAPN1-212ENST00000527887 CBR3O75828 277 aa12.97□□□□□ -0.33
CAPN1-212ENST00000527887 LRATO95237 230 aa12.97□□□□□ -0.33
CAPN1-212ENST00000527887 ACTL6AO96019 429 aa12.97□□□□□ -0.33
CAPN1-212ENST00000527887 IL2RAP01589 272 aa12.97□□□□□ -0.33
CAPN1-212ENST00000527887 PYGBP11216 843 aa12.97□□□□□ -0.33
CAPN1-212ENST00000527887 PTPN6P29350 595 aa12.97□□□□□ -0.33
CAPN1-212ENST00000527887 CEACAM8P31997 349 aaPredicted RBP12.97□□□□□ -0.33
CAPN1-212ENST00000527887 SLC18A2Q05940 514 aa12.97□□□□□ -0.33
CAPN1-212ENST00000527887 PLCXD2Q0VAA5 305 aa12.97□□□□□ -0.33
CAPN1-212ENST00000527887 EXOSC7Q15024 291 aaKnown RBP12.97□□□□□ -0.33
CAPN1-212ENST00000527887 CEBPEQ15744 281 aa12.97□□□□□ -0.33
CAPN1-212ENST00000527887 CCDC153Q494R4 210 aa12.97□□□□□ -0.33
CAPN1-212ENST00000527887 ACSF3Q4G176 576 aaPredicted RBP12.97□□□□□ -0.33
CAPN1-212ENST00000527887 TRMT12Q53H54 448 aaKnown RBP12.97□□□□□ -0.33
CAPN1-212ENST00000527887 ZNF628Q5EBL2 1059 aa12.97□□□□□ -0.33
CAPN1-212ENST00000527887 NSUN5P2Q63ZY6 315 aa12.97□□□□□ -0.33
CAPN1-212ENST00000527887 SH2D5Q6ZV89 423 aa12.97□□□□□ -0.33
CAPN1-212ENST00000527887 CDH24Q86UP0 819 aa12.97□□□□□ -0.33
CAPN1-212ENST00000527887 LIX1LQ8IVB5 337 aa12.97□□□□□ -0.33
CAPN1-212ENST00000527887 CCDC116Q8IYX3 515 aa12.97□□□□□ -0.33
CAPN1-212ENST00000527887 PRR22Q8IZ63 422 aa12.97□□□□□ -0.33
CAPN1-212ENST00000527887 MMP21Q8N119 569 aa12.97□□□□□ -0.33
CAPN1-212ENST00000527887 ADCY4Q8NFM4 1077 aa12.97□□□□□ -0.33
CAPN1-212ENST00000527887 METTL2AQ96IZ6 378 aaKnown RBP12.97□□□□□ -0.33
CAPN1-212ENST00000527887 COL21A1Q96P44 957 aa12.97□□□□□ -0.33
CAPN1-212ENST00000527887 BTBD9Q96Q07 612 aa12.97□□□□□ -0.33
CAPN1-212ENST00000527887 HBEGFQ99075 208 aa12.97□□□□□ -0.33
CAPN1-212ENST00000527887 CALHM2Q9HA72 323 aa12.97□□□□□ -0.33
CAPN1-212ENST00000527887 PFDN4Q9NQP4 134 aa12.97□□□□□ -0.33
CAPN1-212ENST00000527887 SLC35C2Q9NQQ7 365 aa12.97□□□□□ -0.33
CAPN1-212ENST00000527887 HEY2Q9UBP5 337 aa12.97□□□□□ -0.33
CAPN1-212ENST00000527887 EXO1Q9UQ84 846 aaKnown RBP12.97□□□□□ -0.33
CAPN1-212ENST00000527887 DTX4Q9Y2E6 619 aa12.97□□□□□ -0.33
CAPN1-212ENST00000527887 GPR55Q9Y2T6 319 aaPredicted RBP12.97□□□□□ -0.33
CAPN1-212ENST00000527887 CELSR1Q9NYQ6 3014 aa12.97□□□□□ -0.33
CAPN1-212ENST00000527887 CD8B2A6NJW9 211 aa12.96□□□□□ -0.33
CAPN1-212ENST00000527887 SNPHO15079 494 aa12.96□□□□□ -0.33
CAPN1-212ENST00000527887 TM9SF1O15321 606 aa12.96□□□□□ -0.33
CAPN1-212ENST00000527887 TYROBPO43914 113 aa12.96□□□□□ -0.33
CAPN1-212ENST00000527887 PLOD3O60568 738 aa12.96□□□□□ -0.33
CAPN1-212ENST00000527887 ICOSLGO75144 302 aa12.96□□□□□ -0.33
CAPN1-212ENST00000527887 ZWINTO95229 277 aa12.96□□□□□ -0.33
CAPN1-212ENST00000527887 IL3P08700 152 aa12.96□□□□□ -0.33
CAPN1-212ENST00000527887 PCSK2P16519 638 aa12.96□□□□□ -0.33
CAPN1-212ENST00000527887 TIA1P31483 386 aaKnown RBP eCLIP12.96□□□□□ -0.33
CAPN1-212ENST00000527887 SOX18P35713 384 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms