RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 TRIM4Q9C037 500 aa11.94□□□□□ -0.5
SMPD1-202ENST00000526280 NXF5Q9H1B4 397 aaKnown RBP11.94□□□□□ -0.5
SMPD1-202ENST00000526280 CXorf36Q9H7Y0 433 aa11.94□□□□□ -0.5
SMPD1-202ENST00000526280 FOLH1BQ9HBA9 442 aa11.94□□□□□ -0.5
SMPD1-202ENST00000526280 NEUROD4Q9HD90 331 aa11.94□□□□□ -0.5
SMPD1-202ENST00000526280 HPF1Q9NWY4 346 aa11.94□□□□□ -0.5
SMPD1-202ENST00000526280 FAM120CQ9NX05 1096 aaKnown RBP11.94□□□□□ -0.5
SMPD1-202ENST00000526280 PCDHGB6Q9Y5F9 930 aa11.94□□□□□ -0.5
SMPD1-202ENST00000526280 COPG1Q9Y678 874 aaKnown RBP11.94□□□□□ -0.5
SMPD1-202ENST00000526280 CFAP46Q8IYW2 2715 aa11.94□□□□□ -0.5
SMPD1-202ENST00000526280 FASNP49327 2511 aaKnown RBP11.93□□□□□ -0.5
SMPD1-202ENST00000526280 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.93□□□□□ -0.5
SMPD1-202ENST00000526280 FAM234BA2RU67 622 aa11.93□□□□□ -0.5
SMPD1-202ENST00000526280 FRG2CA6NGY1 282 aa11.93□□□□□ -0.5
SMPD1-202ENST00000526280 TO15178 435 aa11.93□□□□□ -0.5
SMPD1-202ENST00000526280 ACOX3O15254 700 aa11.93□□□□□ -0.5
SMPD1-202ENST00000526280 CFLARO15519 480 aa11.93□□□□□ -0.5
SMPD1-202ENST00000526280 SUV39H1O43463 412 aa11.93□□□□□ -0.5
SMPD1-202ENST00000526280 ERN1O75460 977 aaKnown RBP11.93□□□□□ -0.5
SMPD1-202ENST00000526280 SORBS2O94875 1100 aaKnown RBP11.93□□□□□ -0.5
SMPD1-202ENST00000526280 FBXO45P0C2W1 286 aa11.93□□□□□ -0.5
SMPD1-202ENST00000526280 CT45A8P0DMV1 189 aa11.93□□□□□ -0.5
SMPD1-202ENST00000526280 CT45A9P0DMV2 189 aa11.93□□□□□ -0.5
SMPD1-202ENST00000526280 CCT3P49368 545 aaKnown RBP11.93□□□□□ -0.5
SMPD1-202ENST00000526280 POLR2JP52435 117 aaKnown RBP11.93□□□□□ -0.5
SMPD1-202ENST00000526280 ARFIP2P53365 341 aa11.93□□□□□ -0.5
SMPD1-202ENST00000526280 PRR5P85299 388 aa11.93□□□□□ -0.5
SMPD1-202ENST00000526280 CT45A2Q5DJT8 189 aa11.93□□□□□ -0.5
SMPD1-202ENST00000526280 ZNF766Q5HY98 468 aa11.93□□□□□ -0.5
SMPD1-202ENST00000526280 TMEM64Q6YI46 380 aa11.93□□□□□ -0.5
SMPD1-202ENST00000526280 SPATA21Q7Z572 469 aa11.93□□□□□ -0.5
SMPD1-202ENST00000526280 ANKRD46Q86W74 232 aa11.93□□□□□ -0.5
SMPD1-202ENST00000526280 CYP4Z2PQ8N1L4 340 aa11.93□□□□□ -0.5
SMPD1-202ENST00000526280 HOXB13Q92826 284 aaPredicted RBP11.93□□□□□ -0.5
SMPD1-202ENST00000526280 FAM120BQ96EK7 910 aaKnown RBP11.93□□□□□ -0.5
SMPD1-202ENST00000526280 HSPBAP1Q96EW2 488 aa11.93□□□□□ -0.5
SMPD1-202ENST00000526280 GIMAP5Q96F15 307 aa11.93□□□□□ -0.5
SMPD1-202ENST00000526280 SCMH1Q96GD3 660 aa11.93□□□□□ -0.5
SMPD1-202ENST00000526280 SGCZQ96LD1 299 aa11.93□□□□□ -0.5
SMPD1-202ENST00000526280 OR52E6Q96RD3 313 aa11.93□□□□□ -0.5
SMPD1-202ENST00000526280 ZNF385DQ9H6B1 395 aa11.93□□□□□ -0.5
SMPD1-202ENST00000526280 TMEM45AQ9NWC5 275 aa11.93□□□□□ -0.5
SMPD1-202ENST00000526280 LUZP4Q9P127 313 aa11.93□□□□□ -0.5
SMPD1-202ENST00000526280 KLHL14Q9P2G3 628 aa11.93□□□□□ -0.5
SMPD1-202ENST00000526280 BTNL2Q9UIR0 455 aa11.93□□□□□ -0.5
SMPD1-202ENST00000526280 PCDHGB4Q9UN71 923 aa11.93□□□□□ -0.5
SMPD1-202ENST00000526280 TRIM33Q9UPN9 1127 aa11.93□□□□□ -0.5
SMPD1-202ENST00000526280 PCDHGA10Q9Y5H3 936 aa11.93□□□□□ -0.5
SMPD1-202ENST00000526280 SNX8Q9Y5X2 465 aa11.93□□□□□ -0.5
SMPD1-202ENST00000526280 NPFFR2Q9Y5X5 522 aa11.93□□□□□ -0.5
SMPD1-202ENST00000526280 TTC36A6NLP5 189 aa11.92□□□□□ -0.5
SMPD1-202ENST00000526280 B8ZZF3 427 aa11.92□□□□□ -0.5
SMPD1-202ENST00000526280 SLC25A12O75746 678 aa11.92□□□□□ -0.5
SMPD1-202ENST00000526280 SP1P08047 785 aa11.92□□□□□ -0.5
SMPD1-202ENST00000526280 ABCB1P08183 1280 aaPredicted RBP11.92□□□□□ -0.5
SMPD1-202ENST00000526280 CD46P15529 392 aa11.92□□□□□ -0.5
SMPD1-202ENST00000526280 NAGAP17050 411 aa11.92□□□□□ -0.5
SMPD1-202ENST00000526280 NCF2P19878 526 aaPredicted RBP11.92□□□□□ -0.5
SMPD1-202ENST00000526280 ABCD3P28288 659 aa11.92□□□□□ -0.5
SMPD1-202ENST00000526280 MAP3K8P41279 467 aa11.92□□□□□ -0.5
SMPD1-202ENST00000526280 PRKAG1P54619 331 aa11.92□□□□□ -0.5
SMPD1-202ENST00000526280 NRG3P56975 720 aa11.92□□□□□ -0.5
SMPD1-202ENST00000526280 PSG6Q00889 435 aa11.92□□□□□ -0.5
SMPD1-202ENST00000526280 LRRC74AQ0VAA2 488 aa11.92□□□□□ -0.5
SMPD1-202ENST00000526280 C19orf57Q0VDD7 668 aa11.92□□□□□ -0.5
SMPD1-202ENST00000526280 SF3A3Q12874 501 aaKnown RBP eCLIP11.92□□□□□ -0.5
SMPD1-202ENST00000526280 ZNF155Q12901 538 aaPredicted RBP11.92□□□□□ -0.5
SMPD1-202ENST00000526280 SQLEQ14534 574 aa11.92□□□□□ -0.5
SMPD1-202ENST00000526280 NNATQ16517 81 aa11.92□□□□□ -0.5
SMPD1-202ENST00000526280 SLC25A25Q6KCM7 469 aa11.92□□□□□ -0.5
SMPD1-202ENST00000526280 RPUSD3Q6P087 351 aaKnown RBP11.92□□□□□ -0.5
SMPD1-202ENST00000526280 NPSR1Q6W5P4 371 aa11.92□□□□□ -0.5
SMPD1-202ENST00000526280 RTL4Q6ZR62 310 aa11.92□□□□□ -0.5
SMPD1-202ENST00000526280 MDGA2Q7Z553 956 aa11.92□□□□□ -0.5
SMPD1-202ENST00000526280 FUNDC1Q8IVP5 155 aa11.92□□□□□ -0.5
SMPD1-202ENST00000526280 DND1Q8IYX4 353 aaKnown RBP11.92□□□□□ -0.5
SMPD1-202ENST00000526280 OR4A15Q8NGL6 344 aa11.92□□□□□ -0.5
SMPD1-202ENST00000526280 GOT1L1Q8NHS2 421 aaPredicted RBP11.92□□□□□ -0.5
SMPD1-202ENST00000526280 SFXN5Q8TD22 340 aa11.92□□□□□ -0.5
SMPD1-202ENST00000526280 TMEM125Q96AQ2 219 aa11.92□□□□□ -0.5
SMPD1-202ENST00000526280 SPACA9Q96E40 222 aaPredicted RBP11.92□□□□□ -0.5
SMPD1-202ENST00000526280 C5orf34Q96MH7 638 aa11.92□□□□□ -0.5
SMPD1-202ENST00000526280 CCDC115Q96NT0 180 aa11.92□□□□□ -0.5
SMPD1-202ENST00000526280 MS4A4EQ96PG1 132 aa11.92□□□□□ -0.5
SMPD1-202ENST00000526280 LMF2Q9BU23 707 aaKnown RBP11.92□□□□□ -0.5
SMPD1-202ENST00000526280 HES7Q9BYE0 225 aa11.92□□□□□ -0.5
SMPD1-202ENST00000526280 ZCCHC3Q9NUD5 404 aaKnown RBP11.92□□□□□ -0.5
SMPD1-202ENST00000526280 ARL2BPQ9Y2Y0 163 aa11.92□□□□□ -0.5
SMPD1-202ENST00000526280 CAPN14A8MX76 684 aa11.91□□□□□ -0.5
SMPD1-202ENST00000526280 NME2P1O60361 137 aa11.91□□□□□ -0.5
SMPD1-202ENST00000526280 CPSF4O95639 269 aaKnown RBP11.91□□□□□ -0.5
SMPD1-202ENST00000526280 NME2P22392 152 aa11.91□□□□□ -0.5
SMPD1-202ENST00000526280 PSPHP78330 225 aa11.91□□□□□ -0.5
SMPD1-202ENST00000526280 NTRK2Q16620 822 aa11.91□□□□□ -0.5
SMPD1-202ENST00000526280 MAPKAPK3Q16644 382 aa11.91□□□□□ -0.5
SMPD1-202ENST00000526280 SPDYE7PQ495Y7 208 aa11.91□□□□□ -0.5
SMPD1-202ENST00000526280 EXOSC6Q5RKV6 272 aaKnown RBP11.91□□□□□ -0.5
SMPD1-202ENST00000526280 MFSD12Q6NUT3 480 aa11.91□□□□□ -0.5
SMPD1-202ENST00000526280 ZCCHC12Q6PEW1 402 aa11.91□□□□□ -0.5
SMPD1-202ENST00000526280 BLOC1S3Q6QNY0 202 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms