RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 H0YAE9 185 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 CAPNS1P04632 268 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 VSX2P58304 361 aaPredicted RBP13.05□□□□□ -0.32
LRRK1-202ENST00000525284 UBE2NP61088 152 aaKnown RBP13.05□□□□□ -0.32
LRRK1-202ENST00000525284 SRYQ05066 204 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 KCNJ11Q14654 390 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 ATP6AP1Q15904 470 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 GPR33Q49SQ1 333 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 LEG1Q6P5S2 330 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 MR1Q95460 341 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 CACNG2Q9Y698 323 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 CXorf49A8MYA2 514 aaPredicted RBP13.05□□□□□ -0.32
LRRK1-202ENST00000525284 YY2O15391 372 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 TGFB1I1O43294 461 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 POP7O75817 140 aaKnown RBP13.05□□□□□ -0.32
LRRK1-202ENST00000525284 MPIG6BO95866 241 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 CHRNB4P30926 498 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 CXCL9Q07325 125 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 SIRPB2Q5JXA9 342 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 PHYHD1Q5SRE7 291 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 UNQ6126/PRO20091Q6UXV3 157 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 SLC6A16Q9GZN6 736 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 PCDHB3Q9Y5E6 796 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 SLC15A5A6NIM6 579 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 ZNF891A8MT65 544 aaPredicted RBP13.05□□□□□ -0.32
LRRK1-202ENST00000525284 AGAP14A8MT82 685 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 J3QR89 54 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 SYT7O43581 403 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 RPL17P18621 184 aaKnown RBP13.05□□□□□ -0.32
LRRK1-202ENST00000525284 THBS3P49746 956 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 ZNF33AQ06730 810 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 SLC18B1Q6NT16 456 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 TPRA1Q86W33 373 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 BPHLQ86WA6 291 aaPredicted RBP13.05□□□□□ -0.32
LRRK1-202ENST00000525284 SUCNR1Q9BXA5 334 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 SLC6A17Q9H1V8 727 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 C2orf42Q9NWW7 574 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 SLC22A31A6NKX4 558 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 SLC38A8A6NNN8 435 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 PIGRP01833 764 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 HOXD12P35452 270 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 PPT1P50897 306 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 COL9A2Q14055 689 aaPredicted RBP13.05□□□□□ -0.32
LRRK1-202ENST00000525284 CLINT1Q14677 625 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 CDONQ4KMG0 1287 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 PAPD5Q8NDF8 572 aaKnown RBP13.05□□□□□ -0.32
LRRK1-202ENST00000525284 IL1F10Q8WWZ1 152 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 SGIP1Q9BQI5 828 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 G6PC3Q9BUM1 346 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 PINK1Q9BXM7 581 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 NUBP2Q9Y5Y2 271 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 DCDC2BA2VCK2 349 aa13.04□□□□□ -0.32
LRRK1-202ENST00000525284 HLA-DQB2P05538 268 aa13.04□□□□□ -0.32
LRRK1-202ENST00000525284 F3P13726 295 aa13.04□□□□□ -0.32
LRRK1-202ENST00000525284 SYN1P17600 705 aa13.04□□□□□ -0.32
LRRK1-202ENST00000525284 BIDP55957 195 aa13.04□□□□□ -0.32
LRRK1-202ENST00000525284 TAS2R31P59538 309 aa13.04□□□□□ -0.32
LRRK1-202ENST00000525284 ZNF791Q3KP31 576 aaPredicted RBP13.04□□□□□ -0.32
LRRK1-202ENST00000525284 C10orf62Q5T681 223 aaPredicted RBP13.04□□□□□ -0.32
LRRK1-202ENST00000525284 OR4K14Q8NGD5 310 aa13.04□□□□□ -0.32
LRRK1-202ENST00000525284 ARNTL2Q8WYA1 636 aa13.04□□□□□ -0.32
LRRK1-202ENST00000525284 TFGQ92734 400 aaPredicted RBP13.04□□□□□ -0.32
LRRK1-202ENST00000525284 UHRF2Q96PU4 802 aa13.04□□□□□ -0.32
LRRK1-202ENST00000525284 OR51E2Q9H255 320 aa13.04□□□□□ -0.32
LRRK1-202ENST00000525284 MOB1AQ9H8S9 216 aa13.04□□□□□ -0.32
LRRK1-202ENST00000525284 DTLQ9NZJ0 730 aa13.04□□□□□ -0.32
LRRK1-202ENST00000525284 C2orf78A6NCI8 922 aa13.04□□□□□ -0.32
LRRK1-202ENST00000525284 RASAL1O95294 804 aa13.04□□□□□ -0.32
LRRK1-202ENST00000525284 PTTG1O95997 202 aa13.04□□□□□ -0.32
LRRK1-202ENST00000525284 SSTR4P31391 388 aa13.04□□□□□ -0.32
LRRK1-202ENST00000525284 HNF4GQ14541 408 aa13.04□□□□□ -0.32
LRRK1-202ENST00000525284 DESI1Q6ICB0 168 aa13.04□□□□□ -0.32
LRRK1-202ENST00000525284 RPL13AP3Q6NVV1 102 aa13.04□□□□□ -0.32
LRRK1-202ENST00000525284 DOK4Q8TEW6 326 aa13.04□□□□□ -0.32
LRRK1-202ENST00000525284 SORCS1Q8WY21 1168 aa13.04□□□□□ -0.32
LRRK1-202ENST00000525284 PRTFDC1Q9NRG1 225 aa13.04□□□□□ -0.32
LRRK1-202ENST00000525284 FUOMA2VDF0 154 aa13.04□□□□□ -0.32
LRRK1-202ENST00000525284 CHEK1O14757 476 aa13.04□□□□□ -0.32
LRRK1-202ENST00000525284 OAS1P00973 400 aaKnown RBP13.04□□□□□ -0.32
LRRK1-202ENST00000525284 LPLP06858 475 aa13.04□□□□□ -0.32
LRRK1-202ENST00000525284 NKX3-2P78367 333 aa13.04□□□□□ -0.32
LRRK1-202ENST00000525284 PDLIM3Q53GG5 364 aaPredicted RBP13.04□□□□□ -0.32
LRRK1-202ENST00000525284 ZNF836Q6ZNA1 936 aa13.04□□□□□ -0.32
LRRK1-202ENST00000525284 SSX7Q7RTT5 188 aa13.04□□□□□ -0.32
LRRK1-202ENST00000525284 KANSL1Q7Z3B3 1105 aa13.04□□□□□ -0.32
LRRK1-202ENST00000525284 PITHD1Q9GZP4 211 aaPredicted RBP13.04□□□□□ -0.32
LRRK1-202ENST00000525284 LOC105369274A0A096LPK9 316 aa13.04□□□□□ -0.32
LRRK1-202ENST00000525284 TRAF3IP2O43734 574 aaPredicted RBP13.04□□□□□ -0.32
LRRK1-202ENST00000525284 NUDT21O43809 227 aaKnown RBP13.04□□□□□ -0.32
LRRK1-202ENST00000525284 EPOP01588 193 aa13.04□□□□□ -0.32
LRRK1-202ENST00000525284 HNRNPH3P31942 346 aaKnown RBP13.04□□□□□ -0.32
LRRK1-202ENST00000525284 SLC18A1P54219 525 aa13.04□□□□□ -0.32
LRRK1-202ENST00000525284 CASP6P55212 293 aa13.04□□□□□ -0.32
LRRK1-202ENST00000525284 ADARB1P78563 741 aaKnown RBP13.04□□□□□ -0.32
LRRK1-202ENST00000525284 SPOCK1Q08629 439 aa13.04□□□□□ -0.32
LRRK1-202ENST00000525284 OR4N4Q8N0Y3 316 aa13.04□□□□□ -0.32
LRRK1-202ENST00000525284 ACBD7Q8N6N7 88 aa13.04□□□□□ -0.32
LRRK1-202ENST00000525284 IL17RDQ8NFM7 739 aa13.04□□□□□ -0.32
LRRK1-202ENST00000525284 ELF4Q99607 663 aaPredicted RBP13.04□□□□□ -0.32
LRRK1-202ENST00000525284 NAA11Q9BSU3 229 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms