RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	PIP5KL1	Q5T9C9	394 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	LIPK	Q5VXJ0	399 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	AP1AR	Q63HQ0	302 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	LRRC66	Q68CR7	880 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	NCAPH2	Q6IBW4	605 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	PYHIN1	Q6K0P9	492 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	UGT3A1	Q6NUS8	523 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	NIPAL3	Q6P499	406 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	KDM7A	Q6ZMT4	941 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	TRMT11	Q7Z4G4	463 aa	Known RBP	3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	ECHDC2	Q86YB7	292 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	FAM9C	Q8IZT9	166 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	RBFA	Q8N0V3	343 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	LRRC75A-AS1	Q8N1F1	130 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	COMMD1	Q8N668	190 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	THAP8	Q8NA92	274 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	ENGASE	Q8NFI3	743 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	SLC26A7	Q8TE54	656 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	UBTD2	Q8WUN7	234 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	LIPH	Q8WWY8	451 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	SUSD6	Q92537	303 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	MRPL53	Q96EL3	112 aa	Known RBP	3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	C7orf34	Q96L11	122 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	C12orf66	Q96MD2	445 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	GLT1D1	Q96MS3	346 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	GPR137	Q96N19	417 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	TSSK2	Q96PF2	358 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	PANX1	Q96RD7	426 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	PRMT1	Q99873	361 aa	Known RBP	3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	RTP3	Q9BQQ7	232 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	C11orf70	Q9BRQ4	267 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	RAB6C	Q9H0N0	254 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	UPF3A	Q9H1J1	476 aa	Known RBP	3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	MEAF6	Q9HAF1	191 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	CYP3A43	Q9HB55	503 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	ZFP14	Q9HCL3	533 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	RAB18	Q9NP72	206 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	SPAG4	Q9NPE6	437 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	LZTFL1	Q9NQ48	299 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	VPS54	Q9P1Q0	977 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	LRWD1	Q9UFC0	647 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	TINAG	Q9UJW2	476 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	LAMP3	Q9UQV4	416 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	TMED7	Q9Y3B3	224 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	ATRX	P46100	2492 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	DMD	P11532	3685 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	FASN	P49327	2511 aa	Known RBP	3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	ZFHX4	Q86UP3	3567 aa		3.89	□□□□□ -1.79
PCM1-223	ENST00000524356	GBF1	Q92538	1859 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	LRRC37A2	A6NM11	1700 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	CEP250	Q9BV73	2442 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	LOC100506127	A0A0U1RQW1	187 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	C2CD4B	A6NLJ0	364 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356		K7ERQ8	282 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	CHUK	O15111	745 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	KCNN4	O15554	427 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	RPS6KA5	O75582	802 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	CIAO1	O76071	339 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	WDPCP	O95876	746 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	LGI1	O95970	557 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	ZNF3	P17036	446 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	CYP3A5	P20815	502 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	CTNNA2	P26232	953 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	U2AF2	P26368	475 aa	Known RBP eCLIP	3.88	□□□□□ -1.79	2e-7	■■■□□ 15.9
PCM1-223	ENST00000524356	PPP3CC	P48454	512 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	FNTA	P49354	379 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	NUMB	P49757	651 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	RAD23B	P54727	409 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	CTAG1A	P78358	180 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	MBTD1	Q05BQ5	628 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	SULT2A1	Q06520	285 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	GABPA	Q06546	454 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	CCDC173	Q0VFZ6	552 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	MAB21L1	Q13394	359 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	EFNB3	Q15768	340 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	CA9	Q16790	459 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	PCK2	Q16822	640 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	EXOC3L2	Q2M3D2	409 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	KLHL40	Q2TBA0	621 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	ZNF528	Q3MIS6	628 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356		Q3ZCU0	254 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	NKAIN1	Q4KMZ8	207 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	GPAT3	Q53EU6	434 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	FSCB	Q5H9T9	825 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	FAM76B	Q5HYJ3	339 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	SPANXN2	Q5MJ10	180 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	SEL1L3	Q68CR1	1132 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	PACS1	Q6VY07	963 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	IL17REL	Q6ZVW7	336 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	CCDC80	Q76M96	950 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	FAM131B	Q86XD5	332 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	LRRC49	Q8IUZ0	686 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	CCDC60	Q8IWA6	550 aa	Predicted RBP	3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	DSEL	Q8IZU8	1212 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	GPR137C	Q8N3F9	429 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	TCAIM	Q8N3R3	496 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	RYBP	Q8N488	228 aa	Predicted RBP	3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	SLC5A8	Q8N695	610 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	OR9K2	Q8NGE7	335 aa		3.88	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms