RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 ZNF611Q8N823 705 aa10.48□□□□□ -0.73
SDCBP-211ENST00000523441 CEP112Q8N8E3 955 aa10.48□□□□□ -0.73
SDCBP-211ENST00000523441 C7orf57Q8NEG2 295 aa10.48□□□□□ -0.73
SDCBP-211ENST00000523441 FNDC9Q8TBE3 224 aa10.48□□□□□ -0.73
SDCBP-211ENST00000523441 UBE2E3Q969T4 207 aa10.48□□□□□ -0.73
SDCBP-211ENST00000523441 WDR34Q96EX3 536 aa10.48□□□□□ -0.73
SDCBP-211ENST00000523441 UCN2Q96RP3 112 aa10.48□□□□□ -0.73
SDCBP-211ENST00000523441 CD244Q9BZW8 370 aa10.48□□□□□ -0.73
SDCBP-211ENST00000523441 LYARQ9NX58 379 aaKnown RBP10.48□□□□□ -0.73
SDCBP-211ENST00000523441 ASB4Q9Y574 426 aa10.48□□□□□ -0.73
SDCBP-211ENST00000523441 PCNX3Q9H6A9 2034 aa10.47□□□□□ -0.73
SDCBP-211ENST00000523441 LRRC14BA6NHZ5 514 aa10.47□□□□□ -0.73
SDCBP-211ENST00000523441 SUPT3HB4E1H0 165 aa10.47□□□□□ -0.73
SDCBP-211ENST00000523441 HCRTR2O43614 444 aa10.47□□□□□ -0.73
SDCBP-211ENST00000523441 SSX4O60224 188 aa10.47□□□□□ -0.73
SDCBP-211ENST00000523441 CDH16O75309 829 aa10.47□□□□□ -0.73
SDCBP-211ENST00000523441 SUPT3HO75486 399 aa10.47□□□□□ -0.73
SDCBP-211ENST00000523441 SOD3P08294 240 aa10.47□□□□□ -0.73
SDCBP-211ENST00000523441 PAX1P15863 534 aa10.47□□□□□ -0.73
SDCBP-211ENST00000523441 SRD5A2P31213 254 aa10.47□□□□□ -0.73
SDCBP-211ENST00000523441 FEN1P39748 380 aaKnown RBP10.47□□□□□ -0.73
SDCBP-211ENST00000523441 CASP2P42575 452 aa10.47□□□□□ -0.73
SDCBP-211ENST00000523441 PIK3CGP48736 1102 aa10.47□□□□□ -0.73
SDCBP-211ENST00000523441 XKP51811 444 aa10.47□□□□□ -0.73
SDCBP-211ENST00000523441 SUCLG1P53597 346 aaKnown RBP10.47□□□□□ -0.73
SDCBP-211ENST00000523441 STX5Q13190 355 aa10.47□□□□□ -0.73
SDCBP-211ENST00000523441 PON3Q15166 354 aa10.47□□□□□ -0.73
SDCBP-211ENST00000523441 OR52E8Q6IFG1 317 aa10.47□□□□□ -0.73
SDCBP-211ENST00000523441 GALNT7Q86SF2 657 aa10.47□□□□□ -0.73
SDCBP-211ENST00000523441 LAS2Q8IYD9 372 aa10.47□□□□□ -0.73
SDCBP-211ENST00000523441 OR4K17Q8NGC6 315 aa10.47□□□□□ -0.73
SDCBP-211ENST00000523441 TMBIM1Q969X1 311 aa10.47□□□□□ -0.73
SDCBP-211ENST00000523441 REPS1Q96D71 796 aa10.47□□□□□ -0.73
SDCBP-211ENST00000523441 HS6ST2Q96MM7 605 aa10.47□□□□□ -0.73
SDCBP-211ENST00000523441 PRRG4Q9BZD6 226 aa10.47□□□□□ -0.73
SDCBP-211ENST00000523441 FOLH1BQ9HBA9 442 aa10.47□□□□□ -0.73
SDCBP-211ENST00000523441 MTO1Q9Y2Z2 717 aaKnown RBP10.47□□□□□ -0.73
SDCBP-211ENST00000523441 ANGPTL3Q9Y5C1 460 aa10.47□□□□□ -0.73
SDCBP-211ENST00000523441 MAGED1Q9Y5V3 778 aaPredicted RBP10.47□□□□□ -0.73
SDCBP-211ENST00000523441 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.47□□□□□ -0.73
SDCBP-211ENST00000523441 A0A1W2PP18 115 aa10.46□□□□□ -0.73
SDCBP-211ENST00000523441 FRG2CA6NGY1 282 aa10.46□□□□□ -0.73
SDCBP-211ENST00000523441 DNALI1O14645 258 aaPredicted RBP10.46□□□□□ -0.73
SDCBP-211ENST00000523441 EMC8O43402 210 aa10.46□□□□□ -0.73
SDCBP-211ENST00000523441 SCO2O43819 266 aa10.46□□□□□ -0.73
SDCBP-211ENST00000523441 ERAL1O75616 437 aaKnown RBP10.46□□□□□ -0.73
SDCBP-211ENST00000523441 PLGP00747 810 aaPredicted RBP10.46□□□□□ -0.73
SDCBP-211ENST00000523441 CGAP01215 116 aa10.46□□□□□ -0.73
SDCBP-211ENST00000523441 IGHV4-39P01824 125 aa10.46□□□□□ -0.73
SDCBP-211ENST00000523441 CRHP06850 196 aa10.46□□□□□ -0.73
SDCBP-211ENST00000523441 RHOXF2BP0C7M4 288 aa10.46□□□□□ -0.73
SDCBP-211ENST00000523441 HK1P19367 917 aa10.46□□□□□ -0.73
SDCBP-211ENST00000523441 GGT5P36269 586 aa10.46□□□□□ -0.73
SDCBP-211ENST00000523441 ARL1P40616 181 aaPredicted RBP10.46□□□□□ -0.73
SDCBP-211ENST00000523441 HMGCS1Q01581 520 aa10.46□□□□□ -0.73
SDCBP-211ENST00000523441 RUNX1T1Q06455 604 aa10.46□□□□□ -0.73
SDCBP-211ENST00000523441 TSC22D1Q15714 1073 aa10.46□□□□□ -0.73
SDCBP-211ENST00000523441 SGCBQ16585 318 aa10.46□□□□□ -0.73
SDCBP-211ENST00000523441 CTU2Q2VPK5 515 aaKnown RBP10.46□□□□□ -0.73
SDCBP-211ENST00000523441 C6orf52Q5T4I8 152 aa10.46□□□□□ -0.73
SDCBP-211ENST00000523441 LRRC70Q7Z2Q7 622 aa10.46□□□□□ -0.73
SDCBP-211ENST00000523441 ZCCHC7Q8N3Z6 543 aaKnown RBP10.46□□□□□ -0.73
SDCBP-211ENST00000523441 TEX9Q8N6V9 391 aa10.46□□□□□ -0.73
SDCBP-211ENST00000523441 ARIH2OSQ8N7S6 290 aa10.46□□□□□ -0.73
SDCBP-211ENST00000523441 OR4K14Q8NGD5 310 aa10.46□□□□□ -0.73
SDCBP-211ENST00000523441 ANKRD7Q92527 254 aa10.46□□□□□ -0.73
SDCBP-211ENST00000523441 HTRA1Q92743 480 aa10.46□□□□□ -0.73
SDCBP-211ENST00000523441 LCORQ96JN0 433 aaPredicted RBP10.46□□□□□ -0.73
SDCBP-211ENST00000523441 ADOQ96SZ5 270 aa10.46□□□□□ -0.73
SDCBP-211ENST00000523441 NAT9Q9BTE0 207 aa10.46□□□□□ -0.73
SDCBP-211ENST00000523441 ACTR6Q9GZN1 396 aa10.46□□□□□ -0.73
SDCBP-211ENST00000523441 DERL2Q9GZP9 239 aa10.46□□□□□ -0.73
SDCBP-211ENST00000523441 ALG9Q9H6U8 611 aa10.46□□□□□ -0.73
SDCBP-211ENST00000523441 C12orf49Q9H741 205 aa10.46□□□□□ -0.73
SDCBP-211ENST00000523441 ANKRA2Q9H9E1 313 aa10.46□□□□□ -0.73
SDCBP-211ENST00000523441 OPTCQ9UBM4 332 aa10.46□□□□□ -0.73
SDCBP-211ENST00000523441 PTBP2Q9UKA9 531 aaKnown RBP10.46□□□□□ -0.73
SDCBP-211ENST00000523441 PLLPQ9Y342 182 aa10.46□□□□□ -0.73
SDCBP-211ENST00000523441 ANK2Q01484 3957 aa10.46□□□□□ -0.74
SDCBP-211ENST00000523441 A0A0A6YYD5 115 aa10.45□□□□□ -0.74
SDCBP-211ENST00000523441 FAM234BA2RU67 622 aa10.45□□□□□ -0.74
SDCBP-211ENST00000523441 SHISA8B8ZZ34 492 aa10.45□□□□□ -0.74
SDCBP-211ENST00000523441 UBXN8O00124 270 aa10.45□□□□□ -0.74
SDCBP-211ENST00000523441 ZIC3O60481 467 aa10.45□□□□□ -0.74
SDCBP-211ENST00000523441 OPN1LWP04000 364 aa10.45□□□□□ -0.74
SDCBP-211ENST00000523441 CD8BP10966 210 aa10.45□□□□□ -0.74
SDCBP-211ENST00000523441 PEPDP12955 493 aa10.45□□□□□ -0.74
SDCBP-211ENST00000523441 CPMP14384 443 aa10.45□□□□□ -0.74
SDCBP-211ENST00000523441 CD1DP15813 335 aa10.45□□□□□ -0.74
SDCBP-211ENST00000523441 GRK2P25098 689 aa10.45□□□□□ -0.74
SDCBP-211ENST00000523441 BSGP35613 385 aa10.45□□□□□ -0.74
SDCBP-211ENST00000523441 DEKP35659 375 aaKnown RBP10.45□□□□□ -0.74
SDCBP-211ENST00000523441 CTBP2P56545 445 aa10.45□□□□□ -0.74
SDCBP-211ENST00000523441 CLDN20P56880 219 aa10.45□□□□□ -0.74
SDCBP-211ENST00000523441 MGAT5Q09328 741 aa10.45□□□□□ -0.74
SDCBP-211ENST00000523441 LTB4RQ15722 352 aa10.45□□□□□ -0.74
SDCBP-211ENST00000523441 TBCCQ15814 346 aa10.45□□□□□ -0.74
SDCBP-211ENST00000523441 CPSF6Q16630 551 aaKnown RBP eCLIP10.45□□□□□ -0.74
SDCBP-211ENST00000523441 MRM1Q6IN84 353 aaKnown RBP10.45□□□□□ -0.74
SDCBP-211ENST00000523441 GRHL2Q6ISB3 625 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms