RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 NEURL2Q9BR09 285 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 NAT9Q9BTE0 207 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 ZSCAN5AQ9BUG6 496 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 SPATA16Q9BXB7 569 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 TSPYL1Q9H0U9 437 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 SUDS3Q9H7L9 328 aaPredicted RBP3□□□□□ -1.93
VPS13B-209ENST00000521559 ERVMER34-1Q9H9K5 563 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 UGT1A7Q9HAW7 530 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 UGT1A10Q9HAW8 530 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 UGT1A8Q9HAW9 530 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 EPB41L5Q9HCM4 733 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 MMP25Q9NPA2 562 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 GDF3Q9NR23 364 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 CHRAC1Q9NRG0 131 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 PHPT1Q9NRX4 125 aaPredicted RBP3□□□□□ -1.93
VPS13B-209ENST00000521559 TREX1Q9NSU2 369 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 ZDHHC18Q9NUE0 388 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 SMOXQ9NWM0 555 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 SLC2A6Q9UGQ3 507 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 CD84Q9UIB8 345 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 GMEB2Q9UKD1 530 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 APPL1Q9UKG1 709 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 CORO1CQ9ULV4 474 aaPredicted RBP3□□□□□ -1.93
VPS13B-209ENST00000521559 GPR34Q9UPC5 381 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 SLC17A4Q9Y2C5 497 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 CA5BQ9Y2D0 317 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 OR1A2Q9Y585 309 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 MAD1L1Q9Y6D9 718 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 TEX264Q9Y6I9 313 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 SLCO1B1Q9Y6L6 691 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 MAU2Q9Y6X3 613 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 FAM169AQ9Y6X4 670 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 CDH23Q9H251 3354 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 MYH10P35580 1976 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 TRANK1O15050 2925 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 HELZP42694 1942 aaKnown RBP2.99□□□□□ -1.93
VPS13B-209ENST00000521559 TICRRQ7Z2Z1 1910 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 MYO10Q9HD67 2058 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 TRBV5-4A0A0C4DH59 114 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 SPTY2D1-AS1A0A0U1RR47 76 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 ZCWPW2A0A1B0GU75 182 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 LIPT2A6NK58 231 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 AGAP14A8MT82 685 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 GPR89AB7ZAQ6 455 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 CCL22O00626 93 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 LDLRAD4O15165 306 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 INPP4BO15327 924 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 YKT6O15498 198 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 VEGFDO43915 354 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 DFNA5O60443 496 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 PAGE4O60829 102 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 SLC25A14O95258 325 aaPredicted RBP2.99□□□□□ -1.93
VPS13B-209ENST00000521559 VAPBO95292 243 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 TTC4O95801 387 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 SOD1P00441 154 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 GOT2P00505 430 aaKnown RBP2.99□□□□□ -1.93
VPS13B-209ENST00000521559 TNFP01375 233 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 EIF2S1P05198 315 aaKnown RBP2.99□□□□□ -1.93
VPS13B-209ENST00000521559 TUBBP07437 444 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 IVLP07476 585 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 GSTA2P09210 222 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 GPR89BP0CG08 455 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 THEGLP0DJG4 465 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 ZNF23P17027 643 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 TMEM11P17152 192 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 ALOX12P18054 663 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 CDH2P19022 906 aaPredicted RBP2.99□□□□□ -1.93
VPS13B-209ENST00000521559 FOXN2P32314 431 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 CA5AP35218 305 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 MAGEA4P43358 317 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 ARCN1P48444 511 aaKnown RBP2.99□□□□□ -1.93
VPS13B-209ENST00000521559 THOP1P52888 689 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 KIAA1024LP59773 190 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 SRP54P61011 504 aaKnown RBP2.99□□□□□ -1.93
VPS13B-209ENST00000521559 ERVK11-1P61568 191 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 PMP22Q01453 160 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 PPARDQ03181 441 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 CSTF3Q12996 717 aaKnown RBP2.99□□□□□ -1.93
VPS13B-209ENST00000521559 GRIK2Q13002 908 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 NFATC2Q13469 925 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 PEX6Q13608 980 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 ITGA9Q13797 1035 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 FZD2Q14332 565 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 FGFBP1Q14512 234 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 ITIH4Q14624 930 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 CRYMQ14894 314 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 ALG11Q2TAA5 492 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 HLA-BQ31612 363 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 FASTKD1Q53R41 847 aaKnown RBP2.99□□□□□ -1.93
VPS13B-209ENST00000521559 ZRANB3Q5FWF4 1079 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 SPANXN3Q5MJ09 141 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 LDLRAP1Q5SW96 308 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 TPRG1LQ5T0D9 272 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 TEX35Q5T0J7 233 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 GPRC6AQ5T6X5 926 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 LYPLAL1Q5VWZ2 237 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 STEAP4Q687X5 459 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 RAET1GQ6H3X3 334 aa2.99□□□□□ -1.93
VPS13B-209ENST00000521559 KIAA0930Q6ICG6 404 aaPredicted RBP2.99□□□□□ -1.93
VPS13B-209ENST00000521559 NEPROQ6NW34 567 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms