RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 PRSS53Q2L4Q9 553 aa15.61■□□□□ 0.09
SQLE-205ENST00000521232 NOXRED1Q6NXP6 359 aa15.61■□□□□ 0.09
SQLE-205ENST00000521232 WDR93Q6P2C0 686 aa15.61■□□□□ 0.09
SQLE-205ENST00000521232 EMBQ6PCB8 327 aa15.61■□□□□ 0.09
SQLE-205ENST00000521232 B3GNT6Q6ZMB0 384 aa15.61■□□□□ 0.09
SQLE-205ENST00000521232 RNF165Q6ZSG1 346 aa15.61■□□□□ 0.09
SQLE-205ENST00000521232 ACBD4Q8NC06 268 aa15.61■□□□□ 0.09
SQLE-205ENST00000521232 APOPT1Q96IL0 206 aa15.61■□□□□ 0.09
SQLE-205ENST00000521232 GNRHR2Q96P88 292 aa15.61■□□□□ 0.09
SQLE-205ENST00000521232 BTBD9Q96Q07 612 aa15.61■□□□□ 0.09
SQLE-205ENST00000521232 SPOCK3Q9BQ16 436 aa15.61■□□□□ 0.09
SQLE-205ENST00000521232 TTYH2Q9BSA4 534 aa15.61■□□□□ 0.09
SQLE-205ENST00000521232 ENKD1Q9H0I2 346 aa15.61■□□□□ 0.09
SQLE-205ENST00000521232 SLC6A15Q9H2J7 730 aa15.61■□□□□ 0.09
SQLE-205ENST00000521232 ANKRA2Q9H9E1 313 aa15.61■□□□□ 0.09
SQLE-205ENST00000521232 MYNNQ9NPC7 610 aa15.61■□□□□ 0.09
SQLE-205ENST00000521232 EXO1Q9UQ84 846 aaKnown RBP15.61■□□□□ 0.09
SQLE-205ENST00000521232 POLR3HQ9Y535 204 aaPredicted RBP15.61■□□□□ 0.09
SQLE-205ENST00000521232 FAM215AQ9Y5M1 114 aa15.61■□□□□ 0.09
SQLE-205ENST00000521232 HCFC1P51610 2035 aa15.61■□□□□ 0.09
SQLE-205ENST00000521232 SLC28A1O00337 649 aa15.6■□□□□ 0.09
SQLE-205ENST00000521232 AZIN1O14977 448 aa15.6■□□□□ 0.09
SQLE-205ENST00000521232 CT45A8P0DMV1 189 aa15.6■□□□□ 0.09
SQLE-205ENST00000521232 CT45A9P0DMV2 189 aa15.6■□□□□ 0.09
SQLE-205ENST00000521232 GLI4P10075 376 aa15.6■□□□□ 0.09
SQLE-205ENST00000521232 GABRA1P14867 456 aa15.6■□□□□ 0.09
SQLE-205ENST00000521232 CDK9P50750 372 aaKnown RBP15.6■□□□□ 0.09
SQLE-205ENST00000521232 PLCXD2Q0VAA5 305 aa15.6■□□□□ 0.09
SQLE-205ENST00000521232 CT45A2Q5DJT8 189 aa15.6■□□□□ 0.09
SQLE-205ENST00000521232 TIGD3Q6B0B8 471 aa15.6■□□□□ 0.09
SQLE-205ENST00000521232 CLEC6AQ6EIG7 209 aa15.6■□□□□ 0.09
SQLE-205ENST00000521232 DESI1Q6ICB0 168 aa15.6■□□□□ 0.09
SQLE-205ENST00000521232 SLC30A6Q6NXT4 461 aa15.6■□□□□ 0.09
SQLE-205ENST00000521232 HOMEZQ8IX15 550 aa15.6■□□□□ 0.09
SQLE-205ENST00000521232 FAM9CQ8IZT9 166 aa15.6■□□□□ 0.09
SQLE-205ENST00000521232 CAVIN3Q969G5 261 aa15.6■□□□□ 0.09
SQLE-205ENST00000521232 VSTM2LQ96N03 204 aa15.6■□□□□ 0.09
SQLE-205ENST00000521232 BBS4Q96RK4 519 aa15.6■□□□□ 0.09
SQLE-205ENST00000521232 NODALQ96S42 347 aa15.6■□□□□ 0.09
SQLE-205ENST00000521232 IQCGQ9H095 443 aaKnown RBP15.6■□□□□ 0.09
SQLE-205ENST00000521232 STMN4Q9H169 189 aaPredicted RBP15.6■□□□□ 0.09
SQLE-205ENST00000521232 C15orf41Q9Y2V0 281 aa15.6■□□□□ 0.09
SQLE-205ENST00000521232 PDZD2O15018 2839 aa15.6■□□□□ 0.09
SQLE-205ENST00000521232 ARHGAP21Q5T5U3 1957 aa15.6■□□□□ 0.09
SQLE-205ENST00000521232 OR6C70A6NIJ9 312 aa15.59■□□□□ 0.09
SQLE-205ENST00000521232 RGS14O43566 566 aa15.59■□□□□ 0.09
SQLE-205ENST00000521232 ICOSLGO75144 302 aa15.59■□□□□ 0.09
SQLE-205ENST00000521232 UGT2B11O75310 529 aa15.59■□□□□ 0.09
SQLE-205ENST00000521232 SEC22BO75396 215 aa15.59■□□□□ 0.09
SQLE-205ENST00000521232 SLITRK5O94991 958 aa15.59■□□□□ 0.09
SQLE-205ENST00000521232 SLU7O95391 586 aaKnown RBP15.59■□□□□ 0.09
SQLE-205ENST00000521232 SNRPB2P08579 225 aaKnown RBP15.59■□□□□ 0.09
SQLE-205ENST00000521232 FGF4P08620 206 aa15.59■□□□□ 0.09
SQLE-205ENST00000521232 ELAVL4P26378 380 aaKnown RBP15.59■□□□□ 0.09
SQLE-205ENST00000521232 ALDH3A1P30838 453 aa15.59■□□□□ 0.09
SQLE-205ENST00000521232 PTGDSP41222 190 aa15.59■□□□□ 0.09
SQLE-205ENST00000521232 MASP1P48740 699 aa15.59■□□□□ 0.09
SQLE-205ENST00000521232 TRPC1P48995 793 aa15.59■□□□□ 0.09
SQLE-205ENST00000521232 PSPHP78330 225 aa15.59■□□□□ 0.09
SQLE-205ENST00000521232 IFFO1Q0D2I5 559 aa15.59■□□□□ 0.09
SQLE-205ENST00000521232 ERCC6LQ2NKX8 1250 aa15.59■□□□□ 0.09
SQLE-205ENST00000521232 C1orf185Q5T7R7 199 aa15.59■□□□□ 0.09
SQLE-205ENST00000521232 Q6ZSR9 355 aa15.59■□□□□ 0.09
SQLE-205ENST00000521232 IKBIPQ70UQ0 350 aa15.59■□□□□ 0.09
SQLE-205ENST00000521232 CCDC71Q8IV32 467 aaPredicted RBP15.59■□□□□ 0.09
SQLE-205ENST00000521232 LIX1Q8N485 282 aa15.59■□□□□ 0.09
SQLE-205ENST00000521232 OR7G2Q8NG99 324 aa15.59■□□□□ 0.09
SQLE-205ENST00000521232 TREX2Q9BQ50 279 aaPredicted RBP15.59■□□□□ 0.09
SQLE-205ENST00000521232 METTL7AQ9H8H3 244 aa15.59■□□□□ 0.09
SQLE-205ENST00000521232 MIEF1Q9NQG6 463 aa15.59■□□□□ 0.09
SQLE-205ENST00000521232 TAS2R9Q9NYW1 312 aa15.59■□□□□ 0.09
SQLE-205ENST00000521232 CSMD2Q7Z408 3487 aa15.59■□□□□ 0.09
SQLE-205ENST00000521232 A0A087WV62 115 aa15.58■□□□□ 0.08
SQLE-205ENST00000521232 PLOD2O00469 737 aa15.58■□□□□ 0.08
SQLE-205ENST00000521232 ZNF500O60304 480 aaPredicted RBP15.58■□□□□ 0.08
SQLE-205ENST00000521232 NPHS1O60500 1241 aa15.58■□□□□ 0.08
SQLE-205ENST00000521232 TSPAN2O60636 221 aa15.58■□□□□ 0.08
SQLE-205ENST00000521232 NME6O75414 186 aaPredicted RBP15.58■□□□□ 0.08
SQLE-205ENST00000521232 ERN1O75460 977 aaKnown RBP15.58■□□□□ 0.08
SQLE-205ENST00000521232 TRAPPC6AO75865 159 aa15.58■□□□□ 0.08
SQLE-205ENST00000521232 TOXO94900 526 aa15.58■□□□□ 0.08
SQLE-205ENST00000521232 PTPN6P29350 595 aa15.58■□□□□ 0.08
SQLE-205ENST00000521232 CORO7P57737 925 aa15.58■□□□□ 0.08
SQLE-205ENST00000521232 TFF3Q07654 80 aa15.58■□□□□ 0.08
SQLE-205ENST00000521232 NHSL2Q5HYW2 709 aa15.58■□□□□ 0.08
SQLE-205ENST00000521232 GDF7Q7Z4P5 450 aa15.58■□□□□ 0.08
SQLE-205ENST00000521232 SRRM1Q8IYB3 904 aaKnown RBP15.58■□□□□ 0.08
SQLE-205ENST00000521232 ZNF295-AS1Q8N0V1 137 aa15.58■□□□□ 0.08
SQLE-205ENST00000521232 OR1J4Q8NGS1 313 aa15.58■□□□□ 0.08
SQLE-205ENST00000521232 CDC26Q8NHZ8 85 aa15.58■□□□□ 0.08
SQLE-205ENST00000521232 TMBIM1Q969X1 311 aa15.58■□□□□ 0.08
SQLE-205ENST00000521232 TMCO6Q96DC7 493 aa15.58■□□□□ 0.08
SQLE-205ENST00000521232 SLC35A4Q96G79 324 aa15.58■□□□□ 0.08
SQLE-205ENST00000521232 EGLN2Q96KS0 407 aa15.58■□□□□ 0.08
SQLE-205ENST00000521232 FCRL1Q96LA6 429 aa15.58■□□□□ 0.08
SQLE-205ENST00000521232 COL21A1Q96P44 957 aa15.58■□□□□ 0.08
SQLE-205ENST00000521232 FAM111AQ96PZ2 611 aa15.58■□□□□ 0.08
SQLE-205ENST00000521232 TIMP4Q99727 224 aa15.58■□□□□ 0.08
SQLE-205ENST00000521232 TRIM8Q9BZR9 551 aa15.58■□□□□ 0.08
SQLE-205ENST00000521232 UCK2Q9BZX2 261 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms