RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 KRT6CP48668 564 aa17.9■□□□□ 0.46
PABPC1-215ENST00000520804 CSTF3Q12996 717 aaKnown RBP17.9■□□□□ 0.46
PABPC1-215ENST00000520804 GLE1Q53GS7 698 aaKnown RBP17.9■□□□□ 0.46
PABPC1-215ENST00000520804 ZNF628Q5EBL2 1059 aa17.9■□□□□ 0.46
PABPC1-215ENST00000520804 LGSNQ5TDP6 509 aa17.9■□□□□ 0.46
PABPC1-215ENST00000520804 TIFABQ6ZNK6 161 aa17.9■□□□□ 0.46
PABPC1-215ENST00000520804 MNS1Q8NEH6 495 aa17.9■□□□□ 0.46
PABPC1-215ENST00000520804 ZPLD1Q8TCW7 415 aa17.9■□□□□ 0.46
PABPC1-215ENST00000520804 ZNF675Q8TD23 568 aa17.9■□□□□ 0.46
PABPC1-215ENST00000520804 ZNF382Q96SR6 550 aa17.9■□□□□ 0.46
PABPC1-215ENST00000520804 CXXC4Q9H2H0 198 aa17.9■□□□□ 0.46
PABPC1-215ENST00000520804 LIME1Q9H400 295 aa17.9■□□□□ 0.46
PABPC1-215ENST00000520804 CCM2LQ9NUG4 571 aaPredicted RBP17.9■□□□□ 0.46
PABPC1-215ENST00000520804 TMEM216Q9P0N5 145 aa17.9■□□□□ 0.46
PABPC1-215ENST00000520804 ST6GALNAC2Q9UJ37 374 aa17.9■□□□□ 0.46
PABPC1-215ENST00000520804 MAPRE3Q9UPY8 281 aa17.9■□□□□ 0.46
PABPC1-215ENST00000520804 EXO1Q9UQ84 846 aaKnown RBP17.9■□□□□ 0.46
PABPC1-215ENST00000520804 GPR55Q9Y2T6 319 aaPredicted RBP17.9■□□□□ 0.46
PABPC1-215ENST00000520804 PRAMEF25A6NGN4 478 aa17.89■□□□□ 0.45
PABPC1-215ENST00000520804 OR6C70A6NIJ9 312 aa17.89■□□□□ 0.45
PABPC1-215ENST00000520804 A6NNC1 897 aa17.89■□□□□ 0.45
PABPC1-215ENST00000520804 CBR3O75828 277 aa17.89■□□□□ 0.45
PABPC1-215ENST00000520804 BCAS2O75934 225 aaPredicted RBP17.89■□□□□ 0.45
PABPC1-215ENST00000520804 CHN1P15882 459 aa17.89■□□□□ 0.45
PABPC1-215ENST00000520804 CTSSP25774 331 aa17.89■□□□□ 0.45
PABPC1-215ENST00000520804 GCAP28676 217 aa17.89■□□□□ 0.45
PABPC1-215ENST00000520804 GCKP35557 465 aa17.89■□□□□ 0.45
PABPC1-215ENST00000520804 RCAN2Q14206 197 aa17.89■□□□□ 0.45
PABPC1-215ENST00000520804 GPRIN3Q6ZVF9 776 aa17.89■□□□□ 0.45
PABPC1-215ENST00000520804 LCA5Q86VQ0 697 aa17.89■□□□□ 0.45
PABPC1-215ENST00000520804 CCDC116Q8IYX3 515 aa17.89■□□□□ 0.45
PABPC1-215ENST00000520804 WDSUB1Q8N9V3 476 aa17.89■□□□□ 0.45
PABPC1-215ENST00000520804 ZNF592Q92610 1267 aa17.89■□□□□ 0.45
PABPC1-215ENST00000520804 TMBIM1Q969X1 311 aa17.89■□□□□ 0.45
PABPC1-215ENST00000520804 MTBPQ96DY7 904 aa17.89■□□□□ 0.45
PABPC1-215ENST00000520804 TMEM237Q96Q45 408 aa17.89■□□□□ 0.45
PABPC1-215ENST00000520804 OR2B2Q9GZK3 357 aa17.89■□□□□ 0.45
PABPC1-215ENST00000520804 SERHLQ9NQF3 203 aa17.89■□□□□ 0.45
PABPC1-215ENST00000520804 CBLCQ9ULV8 474 aa17.89■□□□□ 0.45
PABPC1-215ENST00000520804 DLGAP4Q9Y2H0 992 aa17.89■□□□□ 0.45
PABPC1-215ENST00000520804 PCDH7O60245 1069 aa17.88■□□□□ 0.45
PABPC1-215ENST00000520804 DLX3O60479 287 aa17.88■□□□□ 0.45
PABPC1-215ENST00000520804 ULK1O75385 1050 aa17.88■□□□□ 0.45
PABPC1-215ENST00000520804 IL18BPO95998 194 aa17.88■□□□□ 0.45
PABPC1-215ENST00000520804 IL3P08700 152 aa17.88■□□□□ 0.45
PABPC1-215ENST00000520804 ABHD2P08910 425 aa17.88■□□□□ 0.45
PABPC1-215ENST00000520804 CYP4B1P13584 511 aa17.88■□□□□ 0.45
PABPC1-215ENST00000520804 DRD2P14416 443 aa17.88■□□□□ 0.45
PABPC1-215ENST00000520804 CPN1P15169 458 aa17.88■□□□□ 0.45
PABPC1-215ENST00000520804 OPRM1P35372 400 aa17.88■□□□□ 0.45
PABPC1-215ENST00000520804 AGFG1P52594 562 aaKnown RBP17.88■□□□□ 0.45
PABPC1-215ENST00000520804 RAE1P78406 368 aaKnown RBP17.88■□□□□ 0.45
PABPC1-215ENST00000520804 HMGCS1Q01581 520 aa17.88■□□□□ 0.45
PABPC1-215ENST00000520804 DAZAP2Q15038 168 aaPredicted RBP17.88■□□□□ 0.45
PABPC1-215ENST00000520804 CDC20BQ86Y33 519 aa17.88■□□□□ 0.45
PABPC1-215ENST00000520804 GBP7Q8N8V2 638 aaPredicted RBP17.88■□□□□ 0.45
PABPC1-215ENST00000520804 C9orf106Q8NAJ2 232 aa17.88■□□□□ 0.45
PABPC1-215ENST00000520804 METTL6Q8TCB7 284 aa17.88■□□□□ 0.45
PABPC1-215ENST00000520804 TMCO6Q96DC7 493 aa17.88■□□□□ 0.45
PABPC1-215ENST00000520804 ERP27Q96DN0 273 aa17.88■□□□□ 0.45
PABPC1-215ENST00000520804 RMND5BQ96G75 393 aaPredicted RBP17.88■□□□□ 0.45
PABPC1-215ENST00000520804 SLC35A4Q96G79 324 aa17.88■□□□□ 0.45
PABPC1-215ENST00000520804 COL21A1Q96P44 957 aa17.88■□□□□ 0.45
PABPC1-215ENST00000520804 BTBD9Q96Q07 612 aa17.88■□□□□ 0.45
PABPC1-215ENST00000520804 ACPTQ9BZG2 426 aa17.88■□□□□ 0.45
PABPC1-215ENST00000520804 PFDN4Q9NQP4 134 aa17.88■□□□□ 0.45
PABPC1-215ENST00000520804 JKAMPQ9P055 326 aa17.88■□□□□ 0.45
PABPC1-215ENST00000520804 ANKHD1Q8IWZ3 2542 aaKnown RBP17.88■□□□□ 0.45
PABPC1-215ENST00000520804 ABCB7O75027 752 aa17.87■□□□□ 0.45
PABPC1-215ENST00000520804 CTAGE8P0CG41 777 aa17.87■□□□□ 0.45
PABPC1-215ENST00000520804 CT45A8P0DMV1 189 aa17.87■□□□□ 0.45
PABPC1-215ENST00000520804 CT45A9P0DMV2 189 aa17.87■□□□□ 0.45
PABPC1-215ENST00000520804 IMPDH1P20839 514 aa17.87■□□□□ 0.45
PABPC1-215ENST00000520804 ATP5F1P24539 256 aaPredicted RBP17.87■□□□□ 0.45
PABPC1-215ENST00000520804 TACR1P25103 407 aa17.87■□□□□ 0.45
PABPC1-215ENST00000520804 HMOX2P30519 316 aa17.87■□□□□ 0.45
PABPC1-215ENST00000520804 SLCO1A2P46721 670 aa17.87■□□□□ 0.45
PABPC1-215ENST00000520804 SPIN4Q56A73 249 aa17.87■□□□□ 0.45
PABPC1-215ENST00000520804 CT45A2Q5DJT8 189 aa17.87■□□□□ 0.45
PABPC1-215ENST00000520804 KIF18BQ86Y91 864 aa17.87■□□□□ 0.45
PABPC1-215ENST00000520804 CTAGE4Q8IX94 777 aa17.87■□□□□ 0.45
PABPC1-215ENST00000520804 SAMD14Q8IZD0 417 aaPredicted RBP17.87■□□□□ 0.45
PABPC1-215ENST00000520804 OR9A2Q8NGT5 310 aa17.87■□□□□ 0.45
PABPC1-215ENST00000520804 OR14L1PQ8NHC6 308 aa17.87■□□□□ 0.45
PABPC1-215ENST00000520804 GOT1L1Q8NHS2 421 aaPredicted RBP17.87■□□□□ 0.45
PABPC1-215ENST00000520804 EXOSC8Q96B26 276 aaKnown RBP17.87■□□□□ 0.45
PABPC1-215ENST00000520804 APIPQ96GX9 242 aa17.87■□□□□ 0.45
PABPC1-215ENST00000520804 TUBA1CQ9BQE3 449 aa17.87■□□□□ 0.45
PABPC1-215ENST00000520804 ANKRA2Q9H9E1 313 aa17.87■□□□□ 0.45
PABPC1-215ENST00000520804 DOCK7Q96N67 2140 aa17.86■□□□□ 0.45
PABPC1-215ENST00000520804 GNG14A0A1W2PPG7 69 aa17.86■□□□□ 0.45
PABPC1-215ENST00000520804 TUBAL3A6NHL2 446 aa17.86■□□□□ 0.45
PABPC1-215ENST00000520804 EEF1E1-BLOC1S5C9J1V9 151 aa17.86■□□□□ 0.45
PABPC1-215ENST00000520804 EEF1E1O43324 174 aaKnown RBP17.86■□□□□ 0.45
PABPC1-215ENST00000520804 REM1O75628 298 aa17.86■□□□□ 0.45
PABPC1-215ENST00000520804 TMIGD3P0DMS9 266 aaPredicted RBP17.86■□□□□ 0.45
PABPC1-215ENST00000520804 HTR6P50406 440 aa17.86■□□□□ 0.45
PABPC1-215ENST00000520804 PRKAA2P54646 552 aa17.86■□□□□ 0.45
PABPC1-215ENST00000520804 SORDQ00796 357 aa17.86■□□□□ 0.45
PABPC1-215ENST00000520804 HEPACAMQ14CZ8 416 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms