RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 USP9XQ93008 2570 aaPredicted RBP13.02□□□□□ -0.33
VEGFA-221ENST00000520265 TRGV5A0A0B4J1U4 118 aa13.01□□□□□ -0.33
VEGFA-221ENST00000520265 MYO1GB0I1T2 1018 aa13.01□□□□□ -0.33
VEGFA-221ENST00000520265 ITM2AO43736 263 aa13.01□□□□□ -0.33
VEGFA-221ENST00000520265 GLSO94925 669 aaPredicted RBP13.01□□□□□ -0.33
VEGFA-221ENST00000520265 FGF4P08620 206 aa13.01□□□□□ -0.33
VEGFA-221ENST00000520265 DDX5P17844 614 aaKnown RBP13.01□□□□□ -0.33
VEGFA-221ENST00000520265 ASMTP46597 345 aa13.01□□□□□ -0.33
VEGFA-221ENST00000520265 PRKAG1P54619 331 aa13.01□□□□□ -0.33
VEGFA-221ENST00000520265 ABCE1P61221 599 aaKnown RBP13.01□□□□□ -0.33
VEGFA-221ENST00000520265 ZNHIT3Q15649 155 aaPredicted RBP13.01□□□□□ -0.33
VEGFA-221ENST00000520265 ZNF585AQ6P3V2 769 aa13.01□□□□□ -0.33
VEGFA-221ENST00000520265 ANGPTL8Q6UXH0 198 aa13.01□□□□□ -0.33
VEGFA-221ENST00000520265 RPTNQ6XPR3 784 aa13.01□□□□□ -0.33
VEGFA-221ENST00000520265 ZNF551Q7Z340 670 aaPredicted RBP13.01□□□□□ -0.33
VEGFA-221ENST00000520265 WDR53Q7Z5U6 358 aaPredicted RBP13.01□□□□□ -0.33
VEGFA-221ENST00000520265 DOLPP1Q86YN1 238 aa13.01□□□□□ -0.33
VEGFA-221ENST00000520265 CTHRC1Q96CG8 243 aa13.01□□□□□ -0.33
VEGFA-221ENST00000520265 CHMP6Q96FZ7 201 aa13.01□□□□□ -0.33
VEGFA-221ENST00000520265 METTL2AQ96IZ6 378 aaKnown RBP13.01□□□□□ -0.33
VEGFA-221ENST00000520265 PHF12Q96QT6 1004 aa13.01□□□□□ -0.33
VEGFA-221ENST00000520265 OSBPL11Q9BXB4 747 aa13.01□□□□□ -0.33
VEGFA-221ENST00000520265 SLC6A15Q9H2J7 730 aa13.01□□□□□ -0.33
VEGFA-221ENST00000520265 GLIPR2Q9H4G4 154 aa13.01□□□□□ -0.33
VEGFA-221ENST00000520265 REEP4Q9H6H4 257 aa13.01□□□□□ -0.33
VEGFA-221ENST00000520265 ZNF395Q9H8N7 513 aaPredicted RBP13.01□□□□□ -0.33
VEGFA-221ENST00000520265 SSU72Q9NP77 194 aaKnown RBP13.01□□□□□ -0.33
VEGFA-221ENST00000520265 NKIRAS1Q9NYS0 192 aa13.01□□□□□ -0.33
VEGFA-221ENST00000520265 WBP11Q9Y2W2 641 aaKnown RBP13.01□□□□□ -0.33
VEGFA-221ENST00000520265 MEMO1Q9Y316 297 aa13.01□□□□□ -0.33
VEGFA-221ENST00000520265 MYO7BQ6PIF6 2116 aa13.01□□□□□ -0.33
VEGFA-221ENST00000520265 POLEQ07864 2286 aa13.01□□□□□ -0.33
VEGFA-221ENST00000520265 ICE1Q9Y2F5 2266 aa13.01□□□□□ -0.33
VEGFA-221ENST00000520265 C15orf38-AP3S2A0A0A6YYH1 394 aa13□□□□□ -0.33
VEGFA-221ENST00000520265 C2orf72A6NCS6 295 aa13□□□□□ -0.33
VEGFA-221ENST00000520265 PRAMEF25A6NGN4 478 aa13□□□□□ -0.33
VEGFA-221ENST00000520265 BIRC5O15392 142 aa13□□□□□ -0.33
VEGFA-221ENST00000520265 SNX4O95219 450 aa13□□□□□ -0.33
VEGFA-221ENST00000520265 ABCB1P08183 1280 aaPredicted RBP13□□□□□ -0.33
VEGFA-221ENST00000520265 RFPL3SP0C7P2 107 aa13□□□□□ -0.33
VEGFA-221ENST00000520265 BCKDHAP12694 445 aa13□□□□□ -0.33
VEGFA-221ENST00000520265 DRD5P21918 477 aa13□□□□□ -0.33
VEGFA-221ENST00000520265 ARRB2P32121 409 aa13□□□□□ -0.33
VEGFA-221ENST00000520265 PPICP45877 212 aa13□□□□□ -0.33
VEGFA-221ENST00000520265 SLC1A6P48664 564 aa13□□□□□ -0.33
VEGFA-221ENST00000520265 MANFP55145 182 aaKnown RBP13□□□□□ -0.33
VEGFA-221ENST00000520265 FOXO1Q12778 655 aa13□□□□□ -0.33
VEGFA-221ENST00000520265 STX3Q13277 289 aa13□□□□□ -0.33
VEGFA-221ENST00000520265 KIAA0040Q15053 153 aa13□□□□□ -0.33
VEGFA-221ENST00000520265 PRSS53Q2L4Q9 553 aa13□□□□□ -0.33
VEGFA-221ENST00000520265 DESI1Q6ICB0 168 aa13□□□□□ -0.33
VEGFA-221ENST00000520265 Q6ZPB1 254 aaPredicted RBP13□□□□□ -0.33
VEGFA-221ENST00000520265 R3HCC1LQ7Z5L2 792 aaKnown RBP13□□□□□ -0.33
VEGFA-221ENST00000520265 FGD2Q7Z6J4 655 aa13□□□□□ -0.33
VEGFA-221ENST00000520265 ZNF781Q8N8C0 355 aa13□□□□□ -0.33
VEGFA-221ENST00000520265 FBXO30Q8TB52 745 aa13□□□□□ -0.33
VEGFA-221ENST00000520265 ITLN2Q8WWU7 325 aaPredicted RBP13□□□□□ -0.33
VEGFA-221ENST00000520265 EFHD2Q96C19 240 aaPredicted RBP13□□□□□ -0.33
VEGFA-221ENST00000520265 TMCO6Q96DC7 493 aa13□□□□□ -0.33
VEGFA-221ENST00000520265 ERP27Q96DN0 273 aa13□□□□□ -0.33
VEGFA-221ENST00000520265 ZBED6CLQ96FA7 236 aaPredicted RBP13□□□□□ -0.33
VEGFA-221ENST00000520265 PGM2Q96G03 612 aa13□□□□□ -0.33
VEGFA-221ENST00000520265 AMDHD1Q96NU7 426 aa13□□□□□ -0.33
VEGFA-221ENST00000520265 COL21A1Q96P44 957 aa13□□□□□ -0.33
VEGFA-221ENST00000520265 ADOQ96SZ5 270 aa13□□□□□ -0.33
VEGFA-221ENST00000520265 ZNF703Q9H7S9 590 aaPredicted RBP13□□□□□ -0.33
VEGFA-221ENST00000520265 ZDHHC11Q9H8X9 412 aa13□□□□□ -0.33
VEGFA-221ENST00000520265 GALNT9Q9HCQ5 603 aa13□□□□□ -0.33
VEGFA-221ENST00000520265 SH2D2AQ9NP31 389 aa13□□□□□ -0.33
VEGFA-221ENST00000520265 RYDENQ9NUL5 291 aaKnown RBP13□□□□□ -0.33
VEGFA-221ENST00000520265 MAPRE3Q9UPY8 281 aa13□□□□□ -0.33
VEGFA-221ENST00000520265 EIF3LQ9Y262 564 aaKnown RBP13□□□□□ -0.33
VEGFA-221ENST00000520265 ZNF835Q9Y2P0 537 aa13□□□□□ -0.33
VEGFA-221ENST00000520265 ACTL7BQ9Y614 415 aa13□□□□□ -0.33
VEGFA-221ENST00000520265 SPTBN1Q01082 2364 aaKnown RBP12.99□□□□□ -0.33
VEGFA-221ENST00000520265 TMEM120BA0PK00 339 aa12.99□□□□□ -0.33
VEGFA-221ENST00000520265 WIPF3A6NGB9 483 aa12.99□□□□□ -0.33
VEGFA-221ENST00000520265 LRRC3CA6NJW4 275 aa12.99□□□□□ -0.33
VEGFA-221ENST00000520265 FIGNL2A6NMB9 653 aa12.99□□□□□ -0.33
VEGFA-221ENST00000520265 PLOD3O60568 738 aa12.99□□□□□ -0.33
VEGFA-221ENST00000520265 UGT2B11O75310 529 aa12.99□□□□□ -0.33
VEGFA-221ENST00000520265 SLITRK5O94991 958 aa12.99□□□□□ -0.33
VEGFA-221ENST00000520265 TCEA1P23193 301 aaKnown RBP12.99□□□□□ -0.33
VEGFA-221ENST00000520265 CASP3P42574 277 aa12.99□□□□□ -0.33
VEGFA-221ENST00000520265 MAGOHP61326 146 aaKnown RBP12.99□□□□□ -0.33
VEGFA-221ENST00000520265 UGT3A2Q3SY77 523 aa12.99□□□□□ -0.33
VEGFA-221ENST00000520265 WLSQ5T9L3 541 aa12.99□□□□□ -0.33
VEGFA-221ENST00000520265 IL23RQ5VWK5 629 aa12.99□□□□□ -0.33
VEGFA-221ENST00000520265 RNF165Q6ZSG1 346 aa12.99□□□□□ -0.33
VEGFA-221ENST00000520265 LARP4Q71RC2 724 aaKnown RBP eCLIP12.99□□□□□ -0.331e-25■□□□□ 10.3
VEGFA-221ENST00000520265 TRILQ7L0X0 811 aa12.99□□□□□ -0.33
VEGFA-221ENST00000520265 NUP54Q7Z3B4 507 aa12.99□□□□□ -0.33
VEGFA-221ENST00000520265 ZNF808Q8N4W9 903 aaPredicted RBP12.99□□□□□ -0.33
VEGFA-221ENST00000520265 OR1J4Q8NGS1 313 aa12.99□□□□□ -0.33
VEGFA-221ENST00000520265 JADE3Q92613 823 aa12.99□□□□□ -0.33
VEGFA-221ENST00000520265 SARAFQ96BY9 339 aa12.99□□□□□ -0.33
VEGFA-221ENST00000520265 C3orf30Q96M34 536 aa12.99□□□□□ -0.33
VEGFA-221ENST00000520265 GNRHR2Q96P88 292 aa12.99□□□□□ -0.33
VEGFA-221ENST00000520265 BTBD9Q96Q07 612 aa12.99□□□□□ -0.33
VEGFA-221ENST00000520265 NODALQ96S42 347 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms