RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 WACQ9BTA9 647 aa6.52□□□□□ -1.37
SDCBP-208ENST00000520228 TSSK1BQ9BXA7 367 aa6.52□□□□□ -1.37
SDCBP-208ENST00000520228 TBC1D10AQ9BXI6 508 aa6.52□□□□□ -1.37
SDCBP-208ENST00000520228 IMP3Q9NV31 184 aaKnown RBP6.52□□□□□ -1.37
SDCBP-208ENST00000520228 AKAP7Q9P0M2 348 aaPredicted RBP6.52□□□□□ -1.37
SDCBP-208ENST00000520228 SATB2Q9UPW6 733 aa6.52□□□□□ -1.37
SDCBP-208ENST00000520228 MAD1L1Q9Y6D9 718 aa6.52□□□□□ -1.37
SDCBP-208ENST00000520228 PRSS21Q9Y6M0 314 aa6.52□□□□□ -1.37
SDCBP-208ENST00000520228 COLEC10Q9Y6Z7 277 aa6.52□□□□□ -1.37
SDCBP-208ENST00000520228 DOCK9Q9BZ29 2069 aa6.52□□□□□ -1.37
SDCBP-208ENST00000520228 SPEGQ15772 3267 aa6.52□□□□□ -1.37
SDCBP-208ENST00000520228 IGLV5-52A0A0A0MRZ9 124 aa6.51□□□□□ -1.37
SDCBP-208ENST00000520228 A0A1W2PNU3 283 aaPredicted RBP6.51□□□□□ -1.37
SDCBP-208ENST00000520228 LIPT2A6NK58 231 aa6.51□□□□□ -1.37
SDCBP-208ENST00000520228 GOLGA8KD6RF30 607 aa6.51□□□□□ -1.37
SDCBP-208ENST00000520228 GOLGA8TH3BQL2 631 aa6.51□□□□□ -1.37
SDCBP-208ENST00000520228 PRMT5O14744 637 aaPredicted RBP6.51□□□□□ -1.37
SDCBP-208ENST00000520228 LIN7AO14910 233 aaPredicted RBP6.51□□□□□ -1.37
SDCBP-208ENST00000520228 PFDN6O15212 129 aa6.51□□□□□ -1.37
SDCBP-208ENST00000520228 TNFSF15O95150 251 aa6.51□□□□□ -1.37
SDCBP-208ENST00000520228 CYC1P08574 325 aa6.51□□□□□ -1.37
SDCBP-208ENST00000520228 MAOAP21397 527 aa6.51□□□□□ -1.37
SDCBP-208ENST00000520228 PDHA2P29803 388 aa6.51□□□□□ -1.37
SDCBP-208ENST00000520228 MAGEA3P43357 314 aa6.51□□□□□ -1.37
SDCBP-208ENST00000520228 ARCN1P48444 511 aaKnown RBP6.51□□□□□ -1.37
SDCBP-208ENST00000520228 SORDQ00796 357 aa6.51□□□□□ -1.37
SDCBP-208ENST00000520228 PLOD1Q02809 727 aaPredicted RBP6.51□□□□□ -1.37
SDCBP-208ENST00000520228 EGR4Q05215 589 aa6.51□□□□□ -1.37
SDCBP-208ENST00000520228 NAE1Q13564 534 aa6.51□□□□□ -1.37
SDCBP-208ENST00000520228 TRA2AQ13595 282 aaKnown RBP eCLIP6.51□□□□□ -1.37
SDCBP-208ENST00000520228 MORF4L2Q15014 288 aa6.51□□□□□ -1.37
SDCBP-208ENST00000520228 ZNF658BQ4V348 819 aaPredicted RBP6.51□□□□□ -1.37
SDCBP-208ENST00000520228 PTRHD1Q6GMV3 140 aaKnown RBP6.51□□□□□ -1.37
SDCBP-208ENST00000520228 KIAA0930Q6ICG6 404 aaPredicted RBP6.51□□□□□ -1.37
SDCBP-208ENST00000520228 CAPRIN2Q6IMN6 1127 aaKnown RBP6.51□□□□□ -1.37
SDCBP-208ENST00000520228 KLHL35Q6PF15 583 aa6.51□□□□□ -1.37
SDCBP-208ENST00000520228 TMEM135Q86UB9 458 aa6.51□□□□□ -1.37
SDCBP-208ENST00000520228 LRRC6Q86X45 466 aa6.51□□□□□ -1.37
SDCBP-208ENST00000520228 SAMD14Q8IZD0 417 aaPredicted RBP6.51□□□□□ -1.37
SDCBP-208ENST00000520228 PDIK1LQ8N165 341 aa6.51□□□□□ -1.37
SDCBP-208ENST00000520228 IQCF1Q8N6M8 205 aa6.51□□□□□ -1.37
SDCBP-208ENST00000520228 FAM216AQ8WUB2 273 aa6.51□□□□□ -1.37
SDCBP-208ENST00000520228 ELMO1Q92556 727 aa6.51□□□□□ -1.37
SDCBP-208ENST00000520228 FGF11Q92914 225 aa6.51□□□□□ -1.37
SDCBP-208ENST00000520228 TRIM44Q96DX7 344 aaPredicted RBP6.51□□□□□ -1.37
SDCBP-208ENST00000520228 STAMBPL1Q96FJ0 436 aa6.51□□□□□ -1.37
SDCBP-208ENST00000520228 TXNDC15Q96J42 360 aa6.51□□□□□ -1.37
SDCBP-208ENST00000520228 ZNF479Q96JC4 524 aa6.51□□□□□ -1.37
SDCBP-208ENST00000520228 RMDN2Q96LZ7 410 aa6.51□□□□□ -1.37
SDCBP-208ENST00000520228 C16orf45Q96MC5 204 aaPredicted RBP6.51□□□□□ -1.37
SDCBP-208ENST00000520228 ZNF578Q96N58 590 aaPredicted RBP6.51□□□□□ -1.37
SDCBP-208ENST00000520228 CHCHD6Q9BRQ6 235 aa6.51□□□□□ -1.37
SDCBP-208ENST00000520228 TRIM51Q9BSJ1 452 aa6.51□□□□□ -1.37
SDCBP-208ENST00000520228 HAUS8Q9BT25 410 aa6.51□□□□□ -1.37
SDCBP-208ENST00000520228 COG4Q9H9E3 785 aa6.51□□□□□ -1.37
SDCBP-208ENST00000520228 C20orf96Q9NUD7 363 aaPredicted RBP6.51□□□□□ -1.37
SDCBP-208ENST00000520228 TMEM9Q9P0T7 183 aa6.51□□□□□ -1.37
SDCBP-208ENST00000520228 PISDQ9UG56 409 aa6.51□□□□□ -1.37
SDCBP-208ENST00000520228 CDC14AQ9UNH5 594 aa6.51□□□□□ -1.37
SDCBP-208ENST00000520228 PAM16Q9Y3D7 125 aa6.51□□□□□ -1.37
SDCBP-208ENST00000520228 LOXL2Q9Y4K0 774 aa6.51□□□□□ -1.37
SDCBP-208ENST00000520228 HEBP2Q9Y5Z4 205 aa6.51□□□□□ -1.37
SDCBP-208ENST00000520228 RPS6KL1Q9Y6S9 549 aa6.51□□□□□ -1.37
SDCBP-208ENST00000520228 CACNA1GO43497 2377 aa6.51□□□□□ -1.37
SDCBP-208ENST00000520228 TMEM131Q92545 1883 aa6.5□□□□□ -1.37
SDCBP-208ENST00000520228 ZCWPW2A0A1B0GU75 182 aa6.5□□□□□ -1.37
SDCBP-208ENST00000520228 OR6C74A6NCV1 312 aa6.5□□□□□ -1.37
SDCBP-208ENST00000520228 SRRM3A6NNA2 597 aaPredicted RBP6.5□□□□□ -1.37
SDCBP-208ENST00000520228 IQCF5A8MTL0 148 aa6.5□□□□□ -1.37
SDCBP-208ENST00000520228 A8MU76 341 aa6.5□□□□□ -1.37
SDCBP-208ENST00000520228 NDC80O14777 642 aa6.5□□□□□ -1.37
SDCBP-208ENST00000520228 RRP8O43159 456 aaKnown RBP6.5□□□□□ -1.37
SDCBP-208ENST00000520228 ZIC3O60481 467 aa6.5□□□□□ -1.37
SDCBP-208ENST00000520228 CH25HO95992 272 aa6.5□□□□□ -1.37
SDCBP-208ENST00000520228 APOA4P06727 396 aa6.5□□□□□ -1.37
SDCBP-208ENST00000520228 THRAP10827 490 aa6.5□□□□□ -1.37
SDCBP-208ENST00000520228 ZNF12P17014 697 aa6.5□□□□□ -1.37
SDCBP-208ENST00000520228 ITGB6P18564 788 aa6.5□□□□□ -1.37
SDCBP-208ENST00000520228 PGAM1P18669 254 aa6.5□□□□□ -1.37
SDCBP-208ENST00000520228 CDH2P19022 906 aaPredicted RBP6.5□□□□□ -1.37
SDCBP-208ENST00000520228 C21orf33P30042 268 aaPredicted RBP6.5□□□□□ -1.37
SDCBP-208ENST00000520228 CCR7P32248 378 aa6.5□□□□□ -1.37
SDCBP-208ENST00000520228 CSTF2P33240 577 aaKnown RBP eCLIP6.5□□□□□ -1.37
SDCBP-208ENST00000520228 CAPZBP47756 277 aa6.5□□□□□ -1.37
SDCBP-208ENST00000520228 CD151P48509 253 aa6.5□□□□□ -1.37
SDCBP-208ENST00000520228 ERVPABLB-1P60509 514 aa6.5□□□□□ -1.37
SDCBP-208ENST00000520228 MRPS25P82663 173 aaKnown RBP6.5□□□□□ -1.37
SDCBP-208ENST00000520228 CKAP4Q07065 602 aaKnown RBP6.5□□□□□ -1.37
SDCBP-208ENST00000520228 C2orf54Q08AI8 447 aa6.5□□□□□ -1.37
SDCBP-208ENST00000520228 HSPA14Q0VDF9 509 aa6.5□□□□□ -1.37
SDCBP-208ENST00000520228 C16orf72Q14CZ0 275 aa6.5□□□□□ -1.37
SDCBP-208ENST00000520228 TMED2Q15363 201 aa6.5□□□□□ -1.37
SDCBP-208ENST00000520228 MED22Q15528 200 aa6.5□□□□□ -1.37
SDCBP-208ENST00000520228 TYSND1Q2T9J0 566 aa6.5□□□□□ -1.37
SDCBP-208ENST00000520228 ZNF470Q6ECI4 717 aa6.5□□□□□ -1.37
SDCBP-208ENST00000520228 TYW3Q6IPR3 259 aaKnown RBP6.5□□□□□ -1.37
SDCBP-208ENST00000520228 DUS1LQ6P1R4 473 aaKnown RBP6.5□□□□□ -1.37
SDCBP-208ENST00000520228 B3GNT6Q6ZMB0 384 aa6.5□□□□□ -1.37
SDCBP-208ENST00000520228 ZC3HC1Q86WB0 502 aaKnown RBP6.5□□□□□ -1.37
SDCBP-208ENST00000520228 C9orf106Q8NAJ2 232 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms