RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 PPM1NQ8N819 430 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 OR10G3Q8NGC4 313 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 ZNF721Q8TF20 911 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 SLC44A1Q8WWI5 657 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 ATL1Q8WXF7 558 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 MED12Q93074 2177 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 STARD4Q96DR4 205 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 PGM2Q96G03 612 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 HES6Q96HZ4 224 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 HIST1H2AHQ96KK5 128 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 RILPQ96NA2 401 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 RUNDC3BQ96NL0 473 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 MOGAT1Q96PD6 335 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 HIST1H2AJQ99878 128 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 TUBA1CQ9BQE3 449 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 AIF1LQ9BQI0 150 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 H2AFJQ9BTM1 129 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 ALOXE3Q9BYJ1 711 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 BHLHE41Q9C0J9 482 aaPredicted RBP4.42□□□□□ -1.7
SDCBP-207ENST00000520168 RABEP2Q9H5N1 569 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 PELI2Q9HAT8 420 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 PARVBQ9HBI1 364 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 PROK2Q9HC23 129 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 CHRAC1Q9NRG0 131 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 HOMER3Q9NSC5 361 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 TREX1Q9NSU2 369 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 ETAA1Q9NY74 926 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 TAGLN3Q9UI15 199 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 CNOT11Q9UKZ1 510 aaKnown RBP4.42□□□□□ -1.7
SDCBP-207ENST00000520168 DAPP1Q9UN19 280 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 SLC6A5Q9Y345 797 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 SNX8Q9Y5X2 465 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 SPACA6W5XKT8 324 aa4.42□□□□□ -1.7
SDCBP-207ENST00000520168 PRKDCP78527 4128 aaKnown RBP4.41□□□□□ -1.7
SDCBP-207ENST00000520168 A0A0A6YYJ9 748 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 A0A1W2PP18 115 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 SLCO1B7G3V0H7 640 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 H0YC42 278 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 CYR61O00622 381 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 CASQ2O14958 399 aaPredicted RBP4.41□□□□□ -1.7
SDCBP-207ENST00000520168 EMC8O43402 210 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 HCRTR2O43614 444 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 SEC31AO94979 1220 aaKnown RBP4.41□□□□□ -1.7
SDCBP-207ENST00000520168 ACSL3O95573 720 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 B3GALT4O96024 378 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 IGHV4-39P01824 125 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 PF4P02776 101 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 IGKV3-11P04433 115 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 CSF3P09919 207 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 DANCRP0C864 163 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 EGR1P18146 543 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 SAT1P21673 171 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 TBXA2RP21731 343 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 PPP2R1BP30154 601 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 HNF4AP41235 474 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 CCT5P48643 541 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 RGS4P49798 205 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 GZMKP49863 264 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 NAGLUP54802 743 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 NRG3P56975 720 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 EEFSECP57772 596 aaKnown RBP4.41□□□□□ -1.7
SDCBP-207ENST00000520168 BTN3A2P78410 334 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 REEP5Q00765 189 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 LRRC74AQ0VAA2 488 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 FUT7Q11130 342 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 SCGB2A2Q13296 93 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 CTBP1Q13363 440 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 SNTA1Q13424 505 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 NAE1Q13564 534 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 CASP8Q14790 479 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 KBTBD12Q3ZCT8 623 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 FBLN7Q53RD9 439 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 TOR1AIP1Q5JTV8 583 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 HP1BP3Q5SSJ5 553 aaPredicted RBP4.41□□□□□ -1.7
SDCBP-207ENST00000520168 DCST1Q5T197 706 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 TIGD3Q6B0B8 471 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 UGT3A1Q6NUS8 523 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 C8orf74Q6P047 294 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 EMBQ6PCB8 327 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 SEZ6L2Q6UXD5 910 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 CCBE1Q6UXH8 406 aaPredicted RBP4.41□□□□□ -1.7
SDCBP-207ENST00000520168 CHMP1BQ7LBR1 199 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 ZNF550Q7Z398 422 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 CLNKQ7Z7G1 428 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 IFNEQ86WN2 208 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 C9orf40Q8IXQ3 194 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 UBL4BQ8N7F7 174 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 CNEP1R1Q8N9A8 125 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 FAM71DQ8N9W8 422 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 FAM47BQ8NA70 645 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 SRFBP1Q8NEF9 429 aaKnown RBP4.41□□□□□ -1.7
SDCBP-207ENST00000520168 FAM83FQ8NEG4 500 aaPredicted RBP4.41□□□□□ -1.7
SDCBP-207ENST00000520168 OR10H5Q8NGA6 315 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 OR1J4Q8NGS1 313 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 OR56A3Q8NH54 315 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 ANKRD49Q8WVL7 239 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 SLC5A11Q8WWX8 675 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 AKAP1Q92667 903 aaKnown RBP eCLIP4.41□□□□□ -1.7
SDCBP-207ENST00000520168 PROX1Q92786 737 aa4.41□□□□□ -1.7
SDCBP-207ENST00000520168 ANKRD9Q96BM1 317 aaPredicted RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms