RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 WWTR1Q9GZV5 400 aa12.04□□□□□ -0.48
PABPC1-205ENST00000518196 CDCP1Q9H5V8 836 aa12.04□□□□□ -0.48
PABPC1-205ENST00000518196 FOLH1BQ9HBA9 442 aa12.04□□□□□ -0.48
PABPC1-205ENST00000518196 SERHLQ9NQF3 203 aa12.04□□□□□ -0.48
PABPC1-205ENST00000518196 GPR83Q9NYM4 423 aa12.04□□□□□ -0.48
PABPC1-205ENST00000518196 HEMK1Q9Y5R4 338 aaPredicted RBP12.04□□□□□ -0.48
PABPC1-205ENST00000518196 ASPMQ8IZT6 3477 aa12.04□□□□□ -0.48
PABPC1-205ENST00000518196 PTPRQQ9UMZ3 2332 aa12.03□□□□□ -0.48
PABPC1-205ENST00000518196 A0A096LPI6 279 aa12.03□□□□□ -0.48
PABPC1-205ENST00000518196 RNF103-CHMP3A0A140T963 221 aa12.03□□□□□ -0.48
PABPC1-205ENST00000518196 ASPDHA6ND91 283 aa12.03□□□□□ -0.48
PABPC1-205ENST00000518196 MKRN2OSH3BPM6 223 aa12.03□□□□□ -0.48
PABPC1-205ENST00000518196 PRKNO60260 465 aaPredicted RBP12.03□□□□□ -0.48
PABPC1-205ENST00000518196 ERN1O75460 977 aaKnown RBP12.03□□□□□ -0.48
PABPC1-205ENST00000518196 DNAJB5O75953 348 aa12.03□□□□□ -0.48
PABPC1-205ENST00000518196 KRT75O95678 551 aa12.03□□□□□ -0.48
PABPC1-205ENST00000518196 GSNP06396 782 aa12.03□□□□□ -0.48
PABPC1-205ENST00000518196 KRT16P08779 473 aa12.03□□□□□ -0.48
PABPC1-205ENST00000518196 CD1EP15812 388 aa12.03□□□□□ -0.48
PABPC1-205ENST00000518196 CDKN2CP42773 168 aa12.03□□□□□ -0.48
PABPC1-205ENST00000518196 EMDP50402 254 aa12.03□□□□□ -0.48
PABPC1-205ENST00000518196 ZNF155Q12901 538 aaPredicted RBP12.03□□□□□ -0.48
PABPC1-205ENST00000518196 DUSP8Q13202 625 aa12.03□□□□□ -0.48
PABPC1-205ENST00000518196 NFYCQ13952 458 aa12.03□□□□□ -0.48
PABPC1-205ENST00000518196 EBPQ15125 230 aaKnown RBP12.03□□□□□ -0.48
PABPC1-205ENST00000518196 COQ5Q5HYK3 327 aa12.03□□□□□ -0.48
PABPC1-205ENST00000518196 PAGE3Q5JUK9 113 aa12.03□□□□□ -0.48
PABPC1-205ENST00000518196 ABHD17BQ5VST6 288 aa12.03□□□□□ -0.48
PABPC1-205ENST00000518196 FAM91A1Q658Y4 838 aa12.03□□□□□ -0.48
PABPC1-205ENST00000518196 TCTN3Q6NUS6 607 aa12.03□□□□□ -0.48
PABPC1-205ENST00000518196 C6orf120Q7Z4R8 191 aa12.03□□□□□ -0.48
PABPC1-205ENST00000518196 TREML1Q86YW5 311 aa12.03□□□□□ -0.48
PABPC1-205ENST00000518196 LGI4Q8N135 537 aa12.03□□□□□ -0.48
PABPC1-205ENST00000518196 DPP10Q8N608 796 aa12.03□□□□□ -0.48
PABPC1-205ENST00000518196 POU5F2Q8N7G0 328 aa12.03□□□□□ -0.48
PABPC1-205ENST00000518196 SIMC1Q8NDZ2 872 aa12.03□□□□□ -0.48
PABPC1-205ENST00000518196 OR5AK3PQ8NH89 298 aa12.03□□□□□ -0.48
PABPC1-205ENST00000518196 PSMF1Q92530 271 aa12.03□□□□□ -0.48
PABPC1-205ENST00000518196 EXTL1Q92935 676 aa12.03□□□□□ -0.48
PABPC1-205ENST00000518196 TP53INP1Q96A56 240 aa12.03□□□□□ -0.48
PABPC1-205ENST00000518196 PAIP1Q9H074 479 aaKnown RBP12.03□□□□□ -0.48
PABPC1-205ENST00000518196 EQTNQ9NQ60 294 aa12.03□□□□□ -0.48
PABPC1-205ENST00000518196 ABI3Q9P2A4 366 aa12.03□□□□□ -0.48
PABPC1-205ENST00000518196 FAF1Q9UNN5 650 aaPredicted RBP12.03□□□□□ -0.48
PABPC1-205ENST00000518196 YARS2Q9Y2Z4 477 aaKnown RBP12.03□□□□□ -0.48
PABPC1-205ENST00000518196 CHD8Q9HCK8 2581 aa12.02□□□□□ -0.48
PABPC1-205ENST00000518196 CAPN14A8MX76 684 aa12.02□□□□□ -0.49
PABPC1-205ENST00000518196 MRASO14807 208 aa12.02□□□□□ -0.49
PABPC1-205ENST00000518196 CEACAM4O75871 244 aa12.02□□□□□ -0.49
PABPC1-205ENST00000518196 SOX30O94993 753 aa12.02□□□□□ -0.49
PABPC1-205ENST00000518196 PSMG1O95456 288 aa12.02□□□□□ -0.49
PABPC1-205ENST00000518196 NPPAP01160 153 aa12.02□□□□□ -0.49
PABPC1-205ENST00000518196 ALPPP05187 535 aa12.02□□□□□ -0.49
PABPC1-205ENST00000518196 DRD5P21918 477 aa12.02□□□□□ -0.49
PABPC1-205ENST00000518196 MATN1P21941 496 aa12.02□□□□□ -0.49
PABPC1-205ENST00000518196 PPICP45877 212 aa12.02□□□□□ -0.49
PABPC1-205ENST00000518196 ANXA11P50995 505 aaKnown RBP12.02□□□□□ -0.49
PABPC1-205ENST00000518196 NR0B1P51843 470 aaKnown RBP12.02□□□□□ -0.49
PABPC1-205ENST00000518196 NRG3P56975 720 aa12.02□□□□□ -0.49
PABPC1-205ENST00000518196 MLF1P58340 268 aa12.02□□□□□ -0.49
PABPC1-205ENST00000518196 RHDQ02161 417 aa12.02□□□□□ -0.49
PABPC1-205ENST00000518196 RAPSNQ13702 412 aa12.02□□□□□ -0.49
PABPC1-205ENST00000518196 COL28A1Q2UY09 1125 aa12.02□□□□□ -0.49
PABPC1-205ENST00000518196 ACER2Q5QJU3 275 aa12.02□□□□□ -0.49
PABPC1-205ENST00000518196 LRIF1Q5T3J3 769 aa12.02□□□□□ -0.49
PABPC1-205ENST00000518196 FCRLBQ6BAA4 426 aa12.02□□□□□ -0.49
PABPC1-205ENST00000518196 REP15Q6BDI9 236 aa12.02□□□□□ -0.49
PABPC1-205ENST00000518196 ISLR2Q6UXK2 745 aa12.02□□□□□ -0.49
PABPC1-205ENST00000518196 DNAJC14Q6Y2X3 702 aaPredicted RBP12.02□□□□□ -0.49
PABPC1-205ENST00000518196 DHDDSQ86SQ9 333 aa12.02□□□□□ -0.49
PABPC1-205ENST00000518196 TAGAPQ8N103 731 aa12.02□□□□□ -0.49
PABPC1-205ENST00000518196 SLC15A4Q8N697 577 aa12.02□□□□□ -0.49
PABPC1-205ENST00000518196 CDRT4Q8N9R6 151 aa12.02□□□□□ -0.49
PABPC1-205ENST00000518196 C17orf47Q8NEP4 570 aa12.02□□□□□ -0.49
PABPC1-205ENST00000518196 FDCSPQ8NFU4 85 aa12.02□□□□□ -0.49
PABPC1-205ENST00000518196 ADIPOR1Q96A54 375 aa12.02□□□□□ -0.49
PABPC1-205ENST00000518196 NEURL3Q96EH8 262 aa12.02□□□□□ -0.49
PABPC1-205ENST00000518196 HSPBAP1Q96EW2 488 aa12.02□□□□□ -0.49
PABPC1-205ENST00000518196 LCORQ96JN0 433 aaPredicted RBP12.02□□□□□ -0.49
PABPC1-205ENST00000518196 SLC35G5Q96KT7 338 aa12.02□□□□□ -0.49
PABPC1-205ENST00000518196 VSTM2LQ96N03 204 aa12.02□□□□□ -0.49
PABPC1-205ENST00000518196 ITPAQ9BY32 194 aa12.02□□□□□ -0.49
PABPC1-205ENST00000518196 ACTRT3Q9BYD9 372 aa12.02□□□□□ -0.49
PABPC1-205ENST00000518196 TRIM4Q9C037 500 aa12.02□□□□□ -0.49
PABPC1-205ENST00000518196 RAD21L1Q9H4I0 556 aa12.02□□□□□ -0.49
PABPC1-205ENST00000518196 ZNF552Q9H707 407 aaPredicted RBP12.02□□□□□ -0.49
PABPC1-205ENST00000518196 LIN28AQ9H9Z2 209 aaKnown RBP12.02□□□□□ -0.49
PABPC1-205ENST00000518196 GID8Q9NWU2 228 aa12.02□□□□□ -0.49
PABPC1-205ENST00000518196 STMN3Q9NZ72 180 aa12.02□□□□□ -0.49
PABPC1-205ENST00000518196 MYOTQ9UBF9 498 aa12.02□□□□□ -0.49
PABPC1-205ENST00000518196 ERVK-11Q9UQG0 969 aa12.02□□□□□ -0.49
PABPC1-205ENST00000518196 PCDHB14Q9Y5E9 798 aa12.02□□□□□ -0.49
PABPC1-205ENST00000518196 TPRP12270 2363 aaKnown RBP12.01□□□□□ -0.49
PABPC1-205ENST00000518196 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.01□□□□□ -0.49
PABPC1-205ENST00000518196 WWP2O00308 870 aa12.01□□□□□ -0.49
PABPC1-205ENST00000518196 FBP2O00757 339 aa12.01□□□□□ -0.49
PABPC1-205ENST00000518196 HMGN2P05204 90 aaKnown RBP12.01□□□□□ -0.49
PABPC1-205ENST00000518196 ALOX5P09917 674 aa12.01□□□□□ -0.49
PABPC1-205ENST00000518196 PPIBP23284 216 aaKnown RBP12.01□□□□□ -0.49
PABPC1-205ENST00000518196 SSR4P51571 173 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms