RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 ZNF317Q96PQ6 595 aaPredicted RBP-1.87□□□□□ -2.71
RNU6-539P-201ENST00000516665 ARHGDIGQ99819 225 aa-1.87□□□□□ -2.71
RNU6-539P-201ENST00000516665 SLC2A11Q9BYW1 496 aa-1.87□□□□□ -2.71
RNU6-539P-201ENST00000516665 ZDHHC11Q9H8X9 412 aa-1.87□□□□□ -2.71
RNU6-539P-201ENST00000516665 PCDHB16Q9NRJ7 776 aa-1.87□□□□□ -2.71
RNU6-539P-201ENST00000516665 MRGBPQ9NV56 204 aa-1.87□□□□□ -2.71
RNU6-539P-201ENST00000516665 LARSQ9P2J5 1176 aaKnown RBP-1.87□□□□□ -2.71
RNU6-539P-201ENST00000516665 ZNF639Q9UID6 485 aa-1.87□□□□□ -2.71
RNU6-539P-201ENST00000516665 IGLV11-55A0A075B6I3 123 aa-1.88□□□□□ -2.71
RNU6-539P-201ENST00000516665 A0A087WV62 115 aa-1.88□□□□□ -2.71
RNU6-539P-201ENST00000516665 PRC1O43663 620 aa-1.88□□□□□ -2.71
RNU6-539P-201ENST00000516665 EFNA2O43921 213 aa-1.88□□□□□ -2.71
RNU6-539P-201ENST00000516665 SNX3O60493 162 aa-1.88□□□□□ -2.71
RNU6-539P-201ENST00000516665 HCN1O60741 890 aa-1.88□□□□□ -2.71
RNU6-539P-201ENST00000516665 SCGB1D2O95969 90 aa-1.88□□□□□ -2.71
RNU6-539P-201ENST00000516665 ZNF35P13682 527 aa-1.88□□□□□ -2.71
RNU6-539P-201ENST00000516665 ICAM3P32942 547 aa-1.88□□□□□ -2.71
RNU6-539P-201ENST00000516665 PGM1P36871 562 aa-1.88□□□□□ -2.71
RNU6-539P-201ENST00000516665 CLDN17P56750 224 aa-1.88□□□□□ -2.71
RNU6-539P-201ENST00000516665 OC90Q02509 493 aaPredicted RBP-1.88□□□□□ -2.71
RNU6-539P-201ENST00000516665 SYCNQ0VAF6 134 aa-1.88□□□□□ -2.71
RNU6-539P-201ENST00000516665 TPBGQ13641 420 aa-1.88□□□□□ -2.71
RNU6-539P-201ENST00000516665 FAM53BQ14153 422 aa-1.88□□□□□ -2.71
RNU6-539P-201ENST00000516665 ACKR1Q16570 336 aa-1.88□□□□□ -2.71
RNU6-539P-201ENST00000516665 KRTAP19-8Q3LI54 63 aa-1.88□□□□□ -2.71
RNU6-539P-201ENST00000516665 DPCR1Q3MIW9 517 aa-1.88□□□□□ -2.71
RNU6-539P-201ENST00000516665 TMEM255AQ5JRV8 349 aa-1.88□□□□□ -2.71
RNU6-539P-201ENST00000516665 MACC1Q6ZN28 852 aa-1.88□□□□□ -2.71
RNU6-539P-201ENST00000516665 ZNF621Q6ZSS3 439 aa-1.88□□□□□ -2.71
RNU6-539P-201ENST00000516665 HSD11B1LQ7Z5J1 315 aa-1.88□□□□□ -2.71
RNU6-539P-201ENST00000516665 PXKQ7Z7A4 578 aa-1.88□□□□□ -2.71
RNU6-539P-201ENST00000516665 NT5DC3Q86UY8 548 aa-1.88□□□□□ -2.71
RNU6-539P-201ENST00000516665 SNX32Q86XE0 403 aa-1.88□□□□□ -2.71
RNU6-539P-201ENST00000516665 LGI3Q8N145 548 aa-1.88□□□□□ -2.71
RNU6-539P-201ENST00000516665 KIR3DL3Q8N743 410 aa-1.88□□□□□ -2.71
RNU6-539P-201ENST00000516665 OR4F5Q8NH21 305 aa-1.88□□□□□ -2.71
RNU6-539P-201ENST00000516665 LMX1AQ8TE12 382 aa-1.88□□□□□ -2.71
RNU6-539P-201ENST00000516665 ZFP90Q8TF47 636 aa-1.88□□□□□ -2.71
RNU6-539P-201ENST00000516665 FGGYQ96C11 551 aa-1.88□□□□□ -2.71
RNU6-539P-201ENST00000516665 DUS3LQ96G46 650 aaKnown RBP-1.88□□□□□ -2.71
RNU6-539P-201ENST00000516665 ZNF514Q96K75 400 aaPredicted RBP-1.88□□□□□ -2.71
RNU6-539P-201ENST00000516665 OR2A14Q96R47 310 aa-1.88□□□□□ -2.71
RNU6-539P-201ENST00000516665 FRMD8P1Q9BZ68 369 aaPredicted RBP-1.88□□□□□ -2.71
RNU6-539P-201ENST00000516665 TRIM9Q9C026 710 aa-1.88□□□□□ -2.71
RNU6-539P-201ENST00000516665 UBE2TQ9NPD8 197 aaPredicted RBP-1.88□□□□□ -2.71
RNU6-539P-201ENST00000516665 EXOC1Q9NV70 894 aa-1.88□□□□□ -2.71
RNU6-539P-201ENST00000516665 GRHPRQ9UBQ7 328 aa-1.88□□□□□ -2.71
RNU6-539P-201ENST00000516665 CORO1CQ9ULV4 474 aaPredicted RBP-1.88□□□□□ -2.71
RNU6-539P-201ENST00000516665 PADI2Q9Y2J8 665 aa-1.88□□□□□ -2.71
RNU6-539P-201ENST00000516665 ANKRD12Q6UB98 2062 aa-1.88□□□□□ -2.71
RNU6-539P-201ENST00000516665 IGHV7-81A0A0B4J1V7 117 aa-1.89□□□□□ -2.71
RNU6-539P-201ENST00000516665 TRGV4A0A0C4DH28 118 aa-1.89□□□□□ -2.71
RNU6-539P-201ENST00000516665 C5orf63A6NC05 138 aa-1.89□□□□□ -2.71
RNU6-539P-201ENST00000516665 C17orf105B2RV13 164 aa-1.89□□□□□ -2.71
RNU6-539P-201ENST00000516665 SLC28A1O00337 649 aa-1.89□□□□□ -2.71
RNU6-539P-201ENST00000516665 LCMT2O60294 686 aaKnown RBP-1.89□□□□□ -2.71
RNU6-539P-201ENST00000516665 TADA2AO75478 443 aa-1.89□□□□□ -2.71
RNU6-539P-201ENST00000516665 SERPING1P05155 500 aa-1.89□□□□□ -2.71
RNU6-539P-201ENST00000516665 OR8U8P0C7N1 319 aa-1.89□□□□□ -2.71
RNU6-539P-201ENST00000516665 VPREB1P12018 145 aa-1.89□□□□□ -2.71
RNU6-539P-201ENST00000516665 CALML3P27482 149 aa-1.89□□□□□ -2.71
RNU6-539P-201ENST00000516665 TKTL1P51854 596 aa-1.89□□□□□ -2.71
RNU6-539P-201ENST00000516665 XKR7Q5GH72 579 aa-1.89□□□□□ -2.71
RNU6-539P-201ENST00000516665 RNASEH2BQ5TBB1 312 aaKnown RBP-1.89□□□□□ -2.71
RNU6-539P-201ENST00000516665 ATG16L1Q676U5 607 aa-1.89□□□□□ -2.71
RNU6-539P-201ENST00000516665 OR5M10Q6IEU7 315 aa-1.89□□□□□ -2.71
RNU6-539P-201ENST00000516665 TCEAL6Q6IPX3 200 aa-1.89□□□□□ -2.71
RNU6-539P-201ENST00000516665 STRADAQ7RTN6 431 aa-1.89□□□□□ -2.71
RNU6-539P-201ENST00000516665 TCF24Q7RTU0 167 aa-1.89□□□□□ -2.71
RNU6-539P-201ENST00000516665 OTOAQ7RTW8 1153 aa-1.89□□□□□ -2.71
RNU6-539P-201ENST00000516665 ERICH1Q86X53 443 aa-1.89□□□□□ -2.71
RNU6-539P-201ENST00000516665 CACNA2D3Q8IZS8 1091 aa-1.89□□□□□ -2.71
RNU6-539P-201ENST00000516665 SFRP1Q8N474 314 aa-1.89□□□□□ -2.71
RNU6-539P-201ENST00000516665 GPR148Q8TDV2 347 aa-1.89□□□□□ -2.71
RNU6-539P-201ENST00000516665 N4BP2L2Q92802 583 aaPredicted RBP-1.89□□□□□ -2.71
RNU6-539P-201ENST00000516665 CREB3L1Q96BA8 519 aa-1.89□□□□□ -2.71
RNU6-539P-201ENST00000516665 BMFQ96LC9 184 aa-1.89□□□□□ -2.71
RNU6-539P-201ENST00000516665 CCDC138Q96M89 665 aa-1.89□□□□□ -2.71
RNU6-539P-201ENST00000516665 NEK1Q96PY6 1258 aa-1.89□□□□□ -2.71
RNU6-539P-201ENST00000516665 MAP7D2Q96T17 732 aa-1.89□□□□□ -2.71
RNU6-539P-201ENST00000516665 FUZQ9BT04 418 aa-1.89□□□□□ -2.71
RNU6-539P-201ENST00000516665 TM2D1Q9BX74 207 aa-1.89□□□□□ -2.71
RNU6-539P-201ENST00000516665 NUSAP1Q9BXS6 441 aaKnown RBP-1.89□□□□□ -2.71
RNU6-539P-201ENST00000516665 PRRG4Q9BZD6 226 aa-1.89□□□□□ -2.71
RNU6-539P-201ENST00000516665 WWP1Q9H0M0 922 aa-1.89□□□□□ -2.71
RNU6-539P-201ENST00000516665 RIMS4Q9H426 269 aaPredicted RBP-1.89□□□□□ -2.71
RNU6-539P-201ENST00000516665 ACTL8Q9H568 366 aa-1.89□□□□□ -2.71
RNU6-539P-201ENST00000516665 RNF121Q9H920 327 aa-1.89□□□□□ -2.71
RNU6-539P-201ENST00000516665 SEC14L4Q9UDX3 406 aa-1.89□□□□□ -2.71
RNU6-539P-201ENST00000516665 MCTS1Q9ULC4 181 aaKnown RBP-1.89□□□□□ -2.71
RNU6-539P-201ENST00000516665 ABT1Q9ULW3 272 aaKnown RBP-1.89□□□□□ -2.71
RNU6-539P-201ENST00000516665 EXOC7Q9UPT5 735 aa-1.89□□□□□ -2.71
RNU6-539P-201ENST00000516665 R4GN34 69 aa-1.89□□□□□ -2.71
RNU6-539P-201ENST00000516665 POLEQ07864 2286 aa-1.89□□□□□ -2.71
RNU6-539P-201ENST00000516665 ADGRB3O60242 1522 aa-1.9□□□□□ -2.71
RNU6-539P-201ENST00000516665 NCOA6Q14686 2063 aaPredicted RBP-1.9□□□□□ -2.71
RNU6-539P-201ENST00000516665 AGAP14A8MT82 685 aa-1.9□□□□□ -2.71
RNU6-539P-201ENST00000516665 H0YIG0 161 aa-1.9□□□□□ -2.71
RNU6-539P-201ENST00000516665 ZNF264O43296 627 aa-1.9□□□□□ -2.71
RNU6-539P-201ENST00000516665 B4GAT1O43505 415 aa-1.9□□□□□ -2.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms