RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 PPCDCQ96CD2 204 aa11.74□□□□□ -0.53
CLCN3-210ENST00000515420 NTNG2Q96CW9 530 aa11.74□□□□□ -0.53
CLCN3-210ENST00000515420 ZBED6CLQ96FA7 236 aaPredicted RBP11.74□□□□□ -0.53
CLCN3-210ENST00000515420 ZNF597Q96LX8 424 aa11.74□□□□□ -0.53
CLCN3-210ENST00000515420 AMDHD1Q96NU7 426 aa11.74□□□□□ -0.53
CLCN3-210ENST00000515420 DOHHQ9BU89 302 aa11.74□□□□□ -0.53
CLCN3-210ENST00000515420 ANGPTL4Q9BY76 406 aa11.74□□□□□ -0.53
CLCN3-210ENST00000515420 GLIPR2Q9H4G4 154 aa11.74□□□□□ -0.53
CLCN3-210ENST00000515420 ZNF703Q9H7S9 590 aaPredicted RBP11.74□□□□□ -0.53
CLCN3-210ENST00000515420 ZFP64Q9NPA5 681 aa11.74□□□□□ -0.53
CLCN3-210ENST00000515420 KCNK9Q9NPC2 374 aa11.74□□□□□ -0.53
CLCN3-210ENST00000515420 ACSS1Q9NUB1 689 aaPredicted RBP11.74□□□□□ -0.53
CLCN3-210ENST00000515420 B4GALT7Q9UBV7 327 aa11.74□□□□□ -0.53
CLCN3-210ENST00000515420 PLEKHB1Q9UF11 243 aaPredicted RBP11.74□□□□□ -0.53
CLCN3-210ENST00000515420 RAP2CQ9Y3L5 183 aa11.74□□□□□ -0.53
CLCN3-210ENST00000515420 A0A1B0GTH9 108 aa11.73□□□□□ -0.53
CLCN3-210ENST00000515420 OR6C70A6NIJ9 312 aa11.73□□□□□ -0.53
CLCN3-210ENST00000515420 LRRC3CA6NJW4 275 aa11.73□□□□□ -0.53
CLCN3-210ENST00000515420 FAM166BA8MTA8 275 aa11.73□□□□□ -0.53
CLCN3-210ENST00000515420 E9PLN8 166 aa11.73□□□□□ -0.53
CLCN3-210ENST00000515420 G3V3Y1 287 aa11.73□□□□□ -0.53
CLCN3-210ENST00000515420 HCN1O60741 890 aa11.73□□□□□ -0.53
CLCN3-210ENST00000515420 TRIM3O75382 744 aaPredicted RBP11.73□□□□□ -0.53
CLCN3-210ENST00000515420 LYPLA1O75608 230 aaPredicted RBP11.73□□□□□ -0.53
CLCN3-210ENST00000515420 CT45A8P0DMV1 189 aa11.73□□□□□ -0.53
CLCN3-210ENST00000515420 CT45A9P0DMV2 189 aa11.73□□□□□ -0.53
CLCN3-210ENST00000515420 PRPS2P11908 318 aa11.73□□□□□ -0.53
CLCN3-210ENST00000515420 AGAP20933 346 aa11.73□□□□□ -0.53
CLCN3-210ENST00000515420 PTGS2P35354 604 aa11.73□□□□□ -0.53
CLCN3-210ENST00000515420 CASP3P42574 277 aa11.73□□□□□ -0.53
CLCN3-210ENST00000515420 MAGEA5P43359 124 aa11.73□□□□□ -0.53
CLCN3-210ENST00000515420 HSF1Q00613 529 aa11.73□□□□□ -0.53
CLCN3-210ENST00000515420 SLC10A1Q14973 349 aa11.73□□□□□ -0.53
CLCN3-210ENST00000515420 PRSS53Q2L4Q9 553 aa11.73□□□□□ -0.53
CLCN3-210ENST00000515420 CT45A2Q5DJT8 189 aa11.73□□□□□ -0.53
CLCN3-210ENST00000515420 C6orf136Q5SQH8 315 aa11.73□□□□□ -0.53
CLCN3-210ENST00000515420 CES4AQ5XG92 561 aa11.73□□□□□ -0.53
CLCN3-210ENST00000515420 TMEM198Q66K66 360 aa11.73□□□□□ -0.53
CLCN3-210ENST00000515420 TMEM64Q6YI46 380 aa11.73□□□□□ -0.53
CLCN3-210ENST00000515420 MAMDC2Q7Z304 686 aaPredicted RBP11.73□□□□□ -0.53
CLCN3-210ENST00000515420 FGD2Q7Z6J4 655 aa11.73□□□□□ -0.53
CLCN3-210ENST00000515420 LRRC34Q8IZ02 419 aa11.73□□□□□ -0.53
CLCN3-210ENST00000515420 NATD1Q8N6N6 113 aa11.73□□□□□ -0.53
CLCN3-210ENST00000515420 HGDQ93099 445 aa11.73□□□□□ -0.53
CLCN3-210ENST00000515420 TLCD1Q96CP7 247 aa11.73□□□□□ -0.53
CLCN3-210ENST00000515420 OMA1Q96E52 524 aa11.73□□□□□ -0.53
CLCN3-210ENST00000515420 SLC35A4Q96G79 324 aa11.73□□□□□ -0.53
CLCN3-210ENST00000515420 CCDC120Q96HB5 630 aa11.73□□□□□ -0.53
CLCN3-210ENST00000515420 TMEM41AQ96HV5 264 aa11.73□□□□□ -0.53
CLCN3-210ENST00000515420 RILPQ96NA2 401 aa11.73□□□□□ -0.53
CLCN3-210ENST00000515420 TSSK3Q96PN8 268 aa11.73□□□□□ -0.53
CLCN3-210ENST00000515420 VKORC1Q9BQB6 163 aa11.73□□□□□ -0.53
CLCN3-210ENST00000515420 FOLH1BQ9HBA9 442 aa11.73□□□□□ -0.53
CLCN3-210ENST00000515420 TMBIM4Q9HC24 238 aa11.73□□□□□ -0.53
CLCN3-210ENST00000515420 ACKR4Q9NPB9 350 aa11.73□□□□□ -0.53
CLCN3-210ENST00000515420 DDX18Q9NVP1 670 aaKnown RBP11.73□□□□□ -0.53
CLCN3-210ENST00000515420 ASIC5Q9NY37 505 aa11.73□□□□□ -0.53
CLCN3-210ENST00000515420 ATP6V1HQ9UI12 483 aa11.73□□□□□ -0.53
CLCN3-210ENST00000515420 TINAGQ9UJW2 476 aa11.73□□□□□ -0.53
CLCN3-210ENST00000515420 PCNX1Q96RV3 2341 aa11.72□□□□□ -0.53
CLCN3-210ENST00000515420 NCKAP5O14513 1909 aa11.72□□□□□ -0.53
CLCN3-210ENST00000515420 TMEM120BA0PK00 339 aa11.72□□□□□ -0.53
CLCN3-210ENST00000515420 WDR91A4D1P6 747 aa11.72□□□□□ -0.53
CLCN3-210ENST00000515420 UPK1AO00322 258 aa11.72□□□□□ -0.53
CLCN3-210ENST00000515420 AQP7O14520 342 aa11.72□□□□□ -0.53
CLCN3-210ENST00000515420 BCKDKO14874 412 aa11.72□□□□□ -0.53
CLCN3-210ENST00000515420 SCAMP2O15127 329 aaKnown RBP11.72□□□□□ -0.53
CLCN3-210ENST00000515420 ITM2AO43736 263 aa11.72□□□□□ -0.53
CLCN3-210ENST00000515420 CDC40O60508 579 aaKnown RBP eCLIP11.72□□□□□ -0.53
CLCN3-210ENST00000515420 ZG16O60844 167 aa11.72□□□□□ -0.53
CLCN3-210ENST00000515420 PEX11AO75192 247 aa11.72□□□□□ -0.53
CLCN3-210ENST00000515420 SKAP2O75563 359 aaPredicted RBP11.72□□□□□ -0.53
CLCN3-210ENST00000515420 ESRRAP11474 423 aaPredicted RBP11.72□□□□□ -0.53
CLCN3-210ENST00000515420 ELAVL4P26378 380 aaKnown RBP11.72□□□□□ -0.53
CLCN3-210ENST00000515420 HPCAL1P37235 193 aa11.72□□□□□ -0.53
CLCN3-210ENST00000515420 MC3RP41968 323 aa11.72□□□□□ -0.53
CLCN3-210ENST00000515420 SLC1A6P48664 564 aa11.72□□□□□ -0.53
CLCN3-210ENST00000515420 RPL14P50914 215 aaKnown RBP11.72□□□□□ -0.53
CLCN3-210ENST00000515420 C21orf58P58505 322 aa11.72□□□□□ -0.53
CLCN3-210ENST00000515420 MRPS22P82650 360 aaKnown RBP11.72□□□□□ -0.53
CLCN3-210ENST00000515420 MLC1Q15049 377 aa11.72□□□□□ -0.53
CLCN3-210ENST00000515420 NNATQ16517 81 aa11.72□□□□□ -0.53
CLCN3-210ENST00000515420 CYP27C1Q4G0S4 372 aa11.72□□□□□ -0.53
CLCN3-210ENST00000515420 HHATQ5VTY9 493 aa11.72□□□□□ -0.53
CLCN3-210ENST00000515420 SLC30A6Q6NXT4 461 aa11.72□□□□□ -0.53
CLCN3-210ENST00000515420 TRILQ7L0X0 811 aa11.72□□□□□ -0.53
CLCN3-210ENST00000515420 PACS2Q86VP3 889 aa11.72□□□□□ -0.53
CLCN3-210ENST00000515420 DOLPP1Q86YN1 238 aa11.72□□□□□ -0.53
CLCN3-210ENST00000515420 PRR22Q8IZ63 422 aa11.72□□□□□ -0.53
CLCN3-210ENST00000515420 ZNF808Q8N4W9 903 aaPredicted RBP11.72□□□□□ -0.53
CLCN3-210ENST00000515420 ZNF781Q8N8C0 355 aa11.72□□□□□ -0.53
CLCN3-210ENST00000515420 FNDC5Q8NAU1 212 aa11.72□□□□□ -0.53
CLCN3-210ENST00000515420 OR5M3Q8NGP4 307 aa11.72□□□□□ -0.53
CLCN3-210ENST00000515420 RAB3IL1Q8TBN0 382 aa11.72□□□□□ -0.53
CLCN3-210ENST00000515420 GFM2Q969S9 779 aaKnown RBP11.72□□□□□ -0.53
CLCN3-210ENST00000515420 TUBGCP3Q96CW5 907 aa11.72□□□□□ -0.53
CLCN3-210ENST00000515420 TMCO6Q96DC7 493 aa11.72□□□□□ -0.53
CLCN3-210ENST00000515420 ELP4Q96EB1 424 aa11.72□□□□□ -0.53
CLCN3-210ENST00000515420 C3orf30Q96M34 536 aa11.72□□□□□ -0.53
CLCN3-210ENST00000515420 SORT1Q99523 831 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms