RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 EVPLLA8MZ36 301 aa11.11□□□□□ -0.63
PDLIM5-220ENST00000514830 K7ENP7 123 aa11.11□□□□□ -0.63
PDLIM5-220ENST00000514830 CLIC1O00299 241 aa11.11□□□□□ -0.63
PDLIM5-220ENST00000514830 TO15178 435 aa11.11□□□□□ -0.63
PDLIM5-220ENST00000514830 ZFAND5O76080 213 aa11.11□□□□□ -0.63
PDLIM5-220ENST00000514830 NKX2-2O95096 273 aa11.11□□□□□ -0.63
PDLIM5-220ENST00000514830 AGR2O95994 175 aa11.11□□□□□ -0.63
PDLIM5-220ENST00000514830 GUSBP08236 651 aa11.11□□□□□ -0.63
PDLIM5-220ENST00000514830 SLC6A2P23975 617 aa11.11□□□□□ -0.63
PDLIM5-220ENST00000514830 PTGER1P34995 402 aa11.11□□□□□ -0.63
PDLIM5-220ENST00000514830 SOAT1P35610 550 aa11.11□□□□□ -0.63
PDLIM5-220ENST00000514830 CHI3L1P36222 383 aaPredicted RBP11.11□□□□□ -0.63
PDLIM5-220ENST00000514830 NUDT2P50583 147 aa11.11□□□□□ -0.63
PDLIM5-220ENST00000514830 RASSF2P50749 326 aa11.11□□□□□ -0.63
PDLIM5-220ENST00000514830 RNF4P78317 190 aa11.11□□□□□ -0.63
PDLIM5-220ENST00000514830 Q0VFX4 171 aa11.11□□□□□ -0.63
PDLIM5-220ENST00000514830 TP53BP2Q13625 1128 aa11.11□□□□□ -0.63
PDLIM5-220ENST00000514830 EBPQ15125 230 aaKnown RBP11.11□□□□□ -0.63
PDLIM5-220ENST00000514830 GTDC1Q4AE62 458 aa11.11□□□□□ -0.63
PDLIM5-220ENST00000514830 NANOGP8Q6NSW7 305 aa11.11□□□□□ -0.63
PDLIM5-220ENST00000514830 CDC73Q6P1J9 531 aa11.11□□□□□ -0.63
PDLIM5-220ENST00000514830 INO80CQ6PI98 192 aaPredicted RBP11.11□□□□□ -0.63
PDLIM5-220ENST00000514830 DNAJC14Q6Y2X3 702 aaPredicted RBP11.11□□□□□ -0.63
PDLIM5-220ENST00000514830 CCDC81Q6ZN84 652 aa11.11□□□□□ -0.63
PDLIM5-220ENST00000514830 SLC29A4Q7RTT9 530 aa11.11□□□□□ -0.63
PDLIM5-220ENST00000514830 YTHDF3Q7Z739 585 aaKnown RBP11.11□□□□□ -0.63
PDLIM5-220ENST00000514830 C9orf40Q8IXQ3 194 aa11.11□□□□□ -0.63
PDLIM5-220ENST00000514830 PGAM4Q8N0Y7 254 aa11.11□□□□□ -0.63
PDLIM5-220ENST00000514830 ZNF321PQ8N8H1 164 aa11.11□□□□□ -0.63
PDLIM5-220ENST00000514830 SIMC1Q8NDZ2 872 aa11.11□□□□□ -0.63
PDLIM5-220ENST00000514830 SPATA9Q9BWV2 254 aa11.11□□□□□ -0.63
PDLIM5-220ENST00000514830 WWTR1Q9GZV5 400 aa11.11□□□□□ -0.63
PDLIM5-220ENST00000514830 ANKRA2Q9H9E1 313 aa11.11□□□□□ -0.63
PDLIM5-220ENST00000514830 NANOGQ9H9S0 305 aa11.11□□□□□ -0.63
PDLIM5-220ENST00000514830 FOLH1BQ9HBA9 442 aa11.11□□□□□ -0.63
PDLIM5-220ENST00000514830 ABCD2Q9UBJ2 740 aa11.11□□□□□ -0.63
PDLIM5-220ENST00000514830 BCAP29Q9UHQ4 241 aa11.11□□□□□ -0.63
PDLIM5-220ENST00000514830 TRBV11-1A0A0K0K1C0 115 aa11.1□□□□□ -0.63
PDLIM5-220ENST00000514830 FRG2CA6NGY1 282 aa11.1□□□□□ -0.63
PDLIM5-220ENST00000514830 TMEM200CA6NKL6 621 aa11.1□□□□□ -0.63
PDLIM5-220ENST00000514830 B2RBV5 119 aa11.1□□□□□ -0.63
PDLIM5-220ENST00000514830 ACOX3O15254 700 aa11.1□□□□□ -0.63
PDLIM5-220ENST00000514830 DNAJA2O60884 412 aa11.1□□□□□ -0.63
PDLIM5-220ENST00000514830 CT45A8P0DMV1 189 aa11.1□□□□□ -0.63
PDLIM5-220ENST00000514830 CT45A9P0DMV2 189 aa11.1□□□□□ -0.63
PDLIM5-220ENST00000514830 KHKP50053 298 aa11.1□□□□□ -0.63
PDLIM5-220ENST00000514830 TMPRSS3P57727 454 aa11.1□□□□□ -0.63
PDLIM5-220ENST00000514830 PSG6Q00889 435 aa11.1□□□□□ -0.63
PDLIM5-220ENST00000514830 RGNQ15493 299 aa11.1□□□□□ -0.63
PDLIM5-220ENST00000514830 CT45A2Q5DJT8 189 aa11.1□□□□□ -0.63
PDLIM5-220ENST00000514830 C16orf89Q6UX73 402 aa11.1□□□□□ -0.63
PDLIM5-220ENST00000514830 NET1Q7Z628 596 aaPredicted RBP11.1□□□□□ -0.63
PDLIM5-220ENST00000514830 SERPINA11Q86U17 422 aa11.1□□□□□ -0.63
PDLIM5-220ENST00000514830 ARHGAP24Q8N264 748 aa11.1□□□□□ -0.63
PDLIM5-220ENST00000514830 SLC15A4Q8N697 577 aa11.1□□□□□ -0.63
PDLIM5-220ENST00000514830 CLEC1AQ8NC01 280 aa11.1□□□□□ -0.63
PDLIM5-220ENST00000514830 OR5AK3PQ8NH89 298 aa11.1□□□□□ -0.63
PDLIM5-220ENST00000514830 TMEM125Q96AQ2 219 aa11.1□□□□□ -0.63
PDLIM5-220ENST00000514830 SLC7A6OSQ96CW6 309 aaPredicted RBP11.1□□□□□ -0.63
PDLIM5-220ENST00000514830 HSPBAP1Q96EW2 488 aa11.1□□□□□ -0.63
PDLIM5-220ENST00000514830 SLC35G5Q96KT7 338 aa11.1□□□□□ -0.63
PDLIM5-220ENST00000514830 DEFB126Q9BYW3 111 aa11.1□□□□□ -0.63
PDLIM5-220ENST00000514830 LHPPQ9H008 270 aa11.1□□□□□ -0.63
PDLIM5-220ENST00000514830 PIGUQ9H490 435 aa11.1□□□□□ -0.63
PDLIM5-220ENST00000514830 SERHL2Q9H4I8 314 aa11.1□□□□□ -0.63
PDLIM5-220ENST00000514830 KAT8Q9H7Z6 458 aaKnown RBP11.1□□□□□ -0.63
PDLIM5-220ENST00000514830 TAS2R1Q9NYW7 299 aa11.1□□□□□ -0.63
PDLIM5-220ENST00000514830 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.1□□□□□ -0.63
PDLIM5-220ENST00000514830 FAF1Q9UNN5 650 aaPredicted RBP11.1□□□□□ -0.63
PDLIM5-220ENST00000514830 ZNF451Q9Y4E5 1061 aa11.1□□□□□ -0.63
PDLIM5-220ENST00000514830 PCDHGB3Q9Y5G1 929 aa11.1□□□□□ -0.63
PDLIM5-220ENST00000514830 ITPR1Q14643 2758 aa11.09□□□□□ -0.63
PDLIM5-220ENST00000514830 C2orf92A0A1B0GVN3 265 aa11.09□□□□□ -0.63
PDLIM5-220ENST00000514830 TNFRSF21O75509 655 aa11.09□□□□□ -0.63
PDLIM5-220ENST00000514830 CEACAM4O75871 244 aa11.09□□□□□ -0.63
PDLIM5-220ENST00000514830 AK1P00568 194 aa11.09□□□□□ -0.63
PDLIM5-220ENST00000514830 ITGAMP11215 1152 aa11.09□□□□□ -0.63
PDLIM5-220ENST00000514830 NAGAP17050 411 aa11.09□□□□□ -0.63
PDLIM5-220ENST00000514830 MATN1P21941 496 aa11.09□□□□□ -0.63
PDLIM5-220ENST00000514830 CPA2P48052 419 aa11.09□□□□□ -0.63
PDLIM5-220ENST00000514830 PRKAG1P54619 331 aa11.09□□□□□ -0.63
PDLIM5-220ENST00000514830 PSME3P61289 254 aa11.09□□□□□ -0.63
PDLIM5-220ENST00000514830 LASP1Q14847 261 aaKnown RBP11.09□□□□□ -0.63
PDLIM5-220ENST00000514830 ZNHIT3Q15649 155 aaPredicted RBP11.09□□□□□ -0.63
PDLIM5-220ENST00000514830 CYP27C1Q4G0S4 372 aa11.09□□□□□ -0.63
PDLIM5-220ENST00000514830 LACTB2Q53H82 288 aaPredicted RBP11.09□□□□□ -0.63
PDLIM5-220ENST00000514830 ATP1A1-AS1Q5TC04 95 aa11.09□□□□□ -0.63
PDLIM5-220ENST00000514830 HEPHL1Q6MZM0 1159 aa11.09□□□□□ -0.63
PDLIM5-220ENST00000514830 CCDC121Q6ZUS5 278 aa11.09□□□□□ -0.63
PDLIM5-220ENST00000514830 CALHM3Q86XJ0 350 aa11.09□□□□□ -0.63
PDLIM5-220ENST00000514830 RNF130Q86XS8 419 aa11.09□□□□□ -0.63
PDLIM5-220ENST00000514830 SLC15A3Q8IY34 581 aa11.09□□□□□ -0.63
PDLIM5-220ENST00000514830 METTL25Q8N6Q8 603 aa11.09□□□□□ -0.63
PDLIM5-220ENST00000514830 SLC16A11Q8NCK7 471 aa11.09□□□□□ -0.63
PDLIM5-220ENST00000514830 LSM14AQ8ND56 463 aaKnown RBP11.09□□□□□ -0.63
PDLIM5-220ENST00000514830 RBM15BQ8NDT2 890 aaKnown RBP11.09□□□□□ -0.63
PDLIM5-220ENST00000514830 CHDHQ8NE62 594 aaPredicted RBP11.09□□□□□ -0.63
PDLIM5-220ENST00000514830 FBXO27Q8NI29 283 aa11.09□□□□□ -0.63
PDLIM5-220ENST00000514830 FAM110BQ8TC76 370 aa11.09□□□□□ -0.63
PDLIM5-220ENST00000514830 PSMF1Q92530 271 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms