RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 MS4A4EQ96PG1 132 aa9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 ADNPQ9H2P0 1102 aa9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 SERHL2Q9H4I8 314 aa9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 SERHLQ9NQF3 203 aa9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 SAR1AQ9NR31 198 aa9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 KLHL1Q9NR64 748 aa9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 SLC6A13Q9NSD5 602 aa9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 FAM120CQ9NX05 1096 aaKnown RBP9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 STMN3Q9NZ72 180 aa9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 C19orf53Q9UNZ5 99 aaPredicted RBP9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 TRIM33Q9UPN9 1127 aa9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 MAPRE3Q9UPY8 281 aa9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 ZNF451Q9Y4E5 1061 aa9.06□□□□□ -0.96
TOPBP1-209ENST00000513818 A0A087WV62 115 aa9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 GXYLT2A0PJZ3 443 aa9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 OR5H15A6NDH6 313 aa9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 CCDC154A6NI56 674 aa9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 FCHO1O14526 889 aa9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 ATXN7O15265 892 aaPredicted RBP9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 EMC8O43402 210 aa9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 ERN1O75460 977 aaKnown RBP9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 CT45A8P0DMV1 189 aa9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 CT45A9P0DMV2 189 aa9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 CD96P40200 585 aa9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 RFX3P48380 749 aa9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 MRPL19P49406 292 aaKnown RBP9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 SSR4P51571 173 aa9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 PMP22Q01453 160 aa9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 OR1C1Q15619 314 aa9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 DPY19L1Q2PZI1 675 aa9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 CT45A2Q5DJT8 189 aa9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 PAGE3Q5JUK9 113 aa9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 C6orf10Q5SRN2 563 aa9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 ANXA8L1Q5VT79 327 aa9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 SPINK14Q6IE38 97 aa9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 IGFL2Q6UWQ7 119 aa9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 LYPD8Q6UX82 237 aa9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 ANGPTL8Q6UXH0 198 aa9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 IL20RBQ6UXL0 311 aa9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 ZNF227Q86WZ6 799 aa9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 SLC44A2Q8IWA5 706 aaPredicted RBP9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 CYP4Z2PQ8N1L4 340 aa9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 TMEM156Q8N614 296 aa9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 GLB1L3Q8NCI6 653 aaPredicted RBP9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 OR5D16Q8NGK9 328 aa9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 OR8K3Q8NH51 312 aa9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 ASB15Q8WXK1 588 aa9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 PIK3R3Q92569 461 aa9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 SLC9A6Q92581 669 aa9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 AURKBQ96GD4 344 aaPredicted RBP9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 CCDC115Q96NT0 180 aa9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 PANX1Q96RD7 426 aa9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 UTP23Q9BRU9 249 aaKnown RBP9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 SLC25A18Q9H1K4 315 aa9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 NEUROD4Q9HD90 331 aa9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 TAS2R9Q9NYW1 312 aa9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 LRFN1Q9P244 771 aa9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 ABI3Q9P2A4 366 aa9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 PRODH2Q9UF12 536 aa9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 TEKT2Q9UIF3 430 aa9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 TUBD1Q9UJT1 453 aa9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 ADAM21Q9UKJ8 722 aa9.05□□□□□ -0.96
TOPBP1-209ENST00000513818 NUP214P35658 2090 aaPredicted RBP9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 A0A0G2JMM0 328 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 PRSS51A0A1B0GVH4 220 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 A0A1W2PPB8 328 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 A0A1W2PRS3 328 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 DYTNA2CJ06 578 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 FRG2CA6NGY1 282 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 A8MVJ9 347 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 KIR3DP1A8MWS1 328 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 RFXANKO14593 260 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 SHOX2O60902 331 aaPredicted RBP9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 NEURL1O76050 574 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 SLITRK5O94991 958 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 HMGN2P05204 90 aaKnown RBP9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 IL6P05231 212 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 ABCD3P28288 659 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 CHI3L1P36222 383 aaPredicted RBP9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 CCT3P49368 545 aaKnown RBP9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 FBXW4P57775 412 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 GPR85P60893 370 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 PRR5P85299 388 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 PSG6Q00889 435 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 PLCXD2Q0VAA5 305 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 KLF10Q13118 480 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 MAPKAPK3Q16644 382 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 DUSP5Q16690 384 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 PRR30Q53SZ7 412 aaPredicted RBP9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 PIGGQ5H8A4 983 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 CCNJQ5T5M9 372 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 SLC6A19Q695T7 634 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 MFSD12Q6NUT3 480 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 BLOC1S3Q6QNY0 202 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 ZNF621Q6ZSS3 439 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 OLIG3Q7RTU3 272 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 MDGA2Q7Z553 956 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 MTDHQ86UE4 582 aaKnown RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms