RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 TSPAN10Q9H1Z9 355 aaPredicted RBP8.91□□□□□ -0.98
RNF4-221ENST00000513643 ZFP64Q9NPA5 681 aa8.91□□□□□ -0.98
RNF4-221ENST00000513643 ACKR4Q9NPB9 350 aa8.91□□□□□ -0.98
RNF4-221ENST00000513643 GIMAP4Q9NUV9 329 aa8.91□□□□□ -0.98
RNF4-221ENST00000513643 QPCTLQ9NXS2 382 aa8.91□□□□□ -0.98
RNF4-221ENST00000513643 GIMAP2Q9UG22 337 aa8.91□□□□□ -0.98
RNF4-221ENST00000513643 BCAP29Q9UHQ4 241 aa8.91□□□□□ -0.98
RNF4-221ENST00000513643 ENTPD4Q9Y227 616 aa8.91□□□□□ -0.98
RNF4-221ENST00000513643 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.91□□□□□ -0.98
RNF4-221ENST00000513643 NINQ8N4C6 2090 aa8.91□□□□□ -0.98
RNF4-221ENST00000513643 NCOA6Q14686 2063 aaPredicted RBP8.9□□□□□ -0.98
RNF4-221ENST00000513643 DCHS2Q6V1P9 2916 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 A0A1B0GTH9 108 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 ATP6AP2A0A1C7CYW4 349 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 WDR91A4D1P6 747 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 OR6C70A6NIJ9 312 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 G3V3Y1 287 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 TP53I11O14683 189 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 ANKRD28O15084 1053 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 SUSD5O60279 629 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 PEX11AO75192 247 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 UGT2B11O75310 529 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 NME6O75414 186 aaPredicted RBP8.9□□□□□ -0.98
RNF4-221ENST00000513643 ATP6AP2O75787 350 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 CELA3AP09093 270 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 PRPS2P11908 318 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 GP1BBP13224 206 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 BGNP21810 368 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 MC3RP41968 323 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 TMED10P49755 219 aaKnown RBP8.9□□□□□ -0.98
RNF4-221ENST00000513643 RPL14P50914 215 aaKnown RBP8.9□□□□□ -0.98
RNF4-221ENST00000513643 NCBP2P52298 156 aaKnown RBP eCLIP8.9□□□□□ -0.985e-11■■■□□ 14.7
RNF4-221ENST00000513643 GAS1P54826 345 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 NRG3P56975 720 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 CORO7P57737 925 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 MAGOHP61326 146 aaKnown RBP8.9□□□□□ -0.98
RNF4-221ENST00000513643 HSF1Q00613 529 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 RBPJQ06330 500 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 AGBL2Q5U5Z8 902 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 IL23RQ5VWK5 629 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 HLA-DQA1Q5Y7H0 255 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 BICRALQ6AI39 1079 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 DESI1Q6ICB0 168 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 ANKRD26P1Q6NSI1 321 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 ARHGAP11AQ6P4F7 1023 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 LARP4Q71RC2 724 aaKnown RBP eCLIP8.9□□□□□ -0.98
RNF4-221ENST00000513643 TRILQ7L0X0 811 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 ZNF551Q7Z340 670 aaPredicted RBP8.9□□□□□ -0.98
RNF4-221ENST00000513643 CAMKMTQ7Z624 323 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 SLC22A16Q86VW1 577 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 DDIASQ8IXT1 998 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 SLC34A3Q8N130 599 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 RAB3IL1Q8TBN0 382 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 FAM57AQ8TBR7 257 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 CIDECQ96AQ7 238 aaPredicted RBP8.9□□□□□ -0.98
RNF4-221ENST00000513643 ARL8AQ96BM9 186 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 ZBTB9Q96C00 473 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 OMA1Q96E52 524 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 GIMAP5Q96F15 307 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 TMEM41AQ96HV5 264 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 TSSK3Q96PN8 268 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 PHF12Q96QT6 1004 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 BBS4Q96RK4 519 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 NODALQ96S42 347 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 SH3GL2Q99962 352 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 LMF2Q9BU23 707 aaKnown RBP8.9□□□□□ -0.98
RNF4-221ENST00000513643 CENPHQ9H3R5 247 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 ZNF703Q9H7S9 590 aaPredicted RBP8.9□□□□□ -0.98
RNF4-221ENST00000513643 AKTIPQ9H8T0 292 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 FOLH1BQ9HBA9 442 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 KCNK9Q9NPC2 374 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 MIEF1Q9NQG6 463 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 TAS2R9Q9NYW1 312 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 MEMO1Q9Y316 297 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 FIS1Q9Y3D6 152 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 TEX15Q9BXT5 2789 aa8.9□□□□□ -0.98
RNF4-221ENST00000513643 OR14I1A6ND48 311 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 TTC36A6NLP5 189 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 CYSRT1A8MQ03 144 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 B4DXG7 233 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 E9PLN8 166 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 AQP7O14520 342 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 KLF11O14901 512 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 TFECO14948 347 aaPredicted RBP8.89□□□□□ -0.99
RNF4-221ENST00000513643 SCAMP2O15127 329 aaKnown RBP8.89□□□□□ -0.99
RNF4-221ENST00000513643 PDPK1O15530 556 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 ZNHIT1O43257 154 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 HCN1O60741 890 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 SCN2BO60939 215 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 ABCB7O75027 752 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 ERN1O75460 977 aaKnown RBP8.89□□□□□ -0.99
RNF4-221ENST00000513643 HSPA4LO95757 839 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 HPNP05981 417 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 LAMP1P11279 417 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 G6PDP11413 515 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 AGAP20933 346 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 ENDOUP21128 410 aaKnown RBP8.89□□□□□ -0.99
RNF4-221ENST00000513643 MAGEA5P43359 124 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 PNLIPRP2P54317 469 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms