RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 NDRG4Q9ULP0 352 aaKnown RBP7.83□□□□□ -1.16
RNF4-220ENST00000513578 SLC9A8Q9Y2E8 581 aa7.83□□□□□ -1.16
RNF4-220ENST00000513578 POFUT2Q9Y2G5 429 aa7.83□□□□□ -1.16
RNF4-220ENST00000513578 IFT52Q9Y366 437 aa7.83□□□□□ -1.16
RNF4-220ENST00000513578 SH3GLB1Q9Y371 365 aa7.83□□□□□ -1.16
RNF4-220ENST00000513578 TECTAO75443 2155 aa7.83□□□□□ -1.16
RNF4-220ENST00000513578 SPTBP11277 2137 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 ADAMTS9Q9P2N4 1935 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 CABIN1Q9Y6J0 2220 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 A0A0A6YYC8 382 aaPredicted RBP7.82□□□□□ -1.16
RNF4-220ENST00000513578 ZNF860A6NHJ4 632 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 I3L1I5 382 aaPredicted RBP7.82□□□□□ -1.16
RNF4-220ENST00000513578 CLDN4O14493 209 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 FFAR1O14842 300 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 ZNF749O43361 778 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 HRO43593 1189 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 MRPS14O60783 128 aaKnown RBP7.82□□□□□ -1.16
RNF4-220ENST00000513578 LDB3O75112 727 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 CCNB2O95067 398 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 NKX2-2O95096 273 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 MED26O95402 600 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 EPPINO95925 133 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 ALPPP05187 535 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 CTSBP07858 339 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 THBS1P07996 1170 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 ALOX5P09917 674 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 ANKRD34CP0C6C1 535 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 CCDC159P0C7I6 412 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 ACP2P11117 423 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 TNFRSF1BP20333 461 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 S1PR1P21453 382 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 NT5EP21589 574 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 RPS4Y1P22090 263 aaKnown RBP7.82□□□□□ -1.16
RNF4-220ENST00000513578 CBLP22681 906 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 PIGAP37287 484 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 STT3AP46977 705 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 CLK3P49761 638 aaKnown RBP7.82□□□□□ -1.16
RNF4-220ENST00000513578 CDH12P55289 794 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 RP1P56715 2156 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 NUP107P57740 925 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 OR1D5P58170 312 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 CSNK2BP67870 215 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 SPIBQ01892 262 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 CFHR1Q03591 330 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 PPP1R8Q12972 351 aaKnown RBP7.82□□□□□ -1.16
RNF4-220ENST00000513578 NPRL3Q12980 569 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 DUSP8Q13202 625 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 SERTAD2Q14140 314 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 EXOC3L2Q2M3D2 409 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 DEFB110Q30KQ9 67 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 GPAT3Q53EU6 434 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 TRMT12Q53H54 448 aaKnown RBP7.82□□□□□ -1.16
RNF4-220ENST00000513578 C6orf141Q5SZD1 244 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 ANKRD34AQ69YU3 496 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 ZNF770Q6IQ21 691 aaPredicted RBP7.82□□□□□ -1.16
RNF4-220ENST00000513578 TSSK4Q6SA08 328 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 C16orf62Q7Z3J2 963 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 SZRD1Q7Z422 152 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 C1orf210Q8IVY1 113 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 SLC44A2Q8IWA5 706 aaPredicted RBP7.82□□□□□ -1.16
RNF4-220ENST00000513578 OR4N5Q8IXE1 308 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 ZNF786Q8N393 782 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 ATG16L2Q8NAA4 619 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 SLC16A11Q8NCK7 471 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 TOR1AIP2Q8NFQ8 470 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 OR4C6Q8NH72 309 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 CEP76Q8TAP6 659 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 SAP25Q8TEE9 199 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 PHF10Q8WUB8 498 aaKnown RBP7.82□□□□□ -1.16
RNF4-220ENST00000513578 OIT3Q8WWZ8 545 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 SLC39A7Q92504 469 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 MAGED4Q96JG8 741 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 HRASLS5Q96KN8 279 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 ALPK1Q96QP1 1244 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 OR1F2PQ96R84 312 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 SDF2Q99470 211 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 FEVQ99581 238 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 APOL4Q9BPW4 351 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 LMF2Q9BU23 707 aaKnown RBP7.82□□□□□ -1.16
RNF4-220ENST00000513578 ZNF350Q9GZX5 532 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 ANKRD19PQ9H560 264 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 ZNF768Q9H5H4 540 aaKnown RBP7.82□□□□□ -1.16
RNF4-220ENST00000513578 SOX17Q9H6I2 414 aaPredicted RBP7.82□□□□□ -1.16
RNF4-220ENST00000513578 CXorf21Q9HAI6 301 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 PRTFDC1Q9NRG1 225 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 SOHLH2Q9NX45 425 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 BLOC1S6Q9UL45 172 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 A4GNTQ9UNA3 340 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 CDC14AQ9UNH5 594 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 MGAT4BQ9UQ53 548 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 TESMINQ9Y4I5 508 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 MMACHCQ9Y4U1 282 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 PCDHGA8Q9Y5G5 932 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 CLDN16Q9Y5I7 305 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 KCNE3Q9Y6H6 103 aa7.82□□□□□ -1.16
RNF4-220ENST00000513578 A0A1W2PRQ8 180 aa7.81□□□□□ -1.16
RNF4-220ENST00000513578 FAM227AF5H4B4 570 aa7.81□□□□□ -1.16
RNF4-220ENST00000513578 FAAHO00519 579 aa7.81□□□□□ -1.16
RNF4-220ENST00000513578 BCKDKO14874 412 aa7.81□□□□□ -1.16
RNF4-220ENST00000513578 PCDH17O14917 1159 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms