RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 CCDC116Q8IYX3 515 aa8.51□□□□□ -1.05
NR1I3-228ENST00000511676 PACRGLQ8N7B6 248 aa8.51□□□□□ -1.05
NR1I3-228ENST00000511676 NUP43Q8NFH3 380 aa8.51□□□□□ -1.05
NR1I3-228ENST00000511676 BBS10Q8TAM1 723 aa8.51□□□□□ -1.05
NR1I3-228ENST00000511676 CANT1Q8WVQ1 401 aa8.51□□□□□ -1.05
NR1I3-228ENST00000511676 LZICQ8WZA0 190 aa8.51□□□□□ -1.05
NR1I3-228ENST00000511676 FIG4Q92562 907 aa8.51□□□□□ -1.05
NR1I3-228ENST00000511676 ANKRD9Q96BM1 317 aaPredicted RBP8.51□□□□□ -1.05
NR1I3-228ENST00000511676 ART5Q96L15 291 aa8.51□□□□□ -1.05
NR1I3-228ENST00000511676 ZNF607Q96SK3 696 aa8.51□□□□□ -1.05
NR1I3-228ENST00000511676 STACQ99469 402 aa8.51□□□□□ -1.05
NR1I3-228ENST00000511676 ACTRT3Q9BYD9 372 aa8.51□□□□□ -1.05
NR1I3-228ENST00000511676 TRIM8Q9BZR9 551 aa8.51□□□□□ -1.05
NR1I3-228ENST00000511676 SPRTNQ9H040 489 aaPredicted RBP8.51□□□□□ -1.05
NR1I3-228ENST00000511676 SLC26A1Q9H2B4 701 aa8.51□□□□□ -1.05
NR1I3-228ENST00000511676 POLE3Q9NRF9 147 aa8.51□□□□□ -1.05
NR1I3-228ENST00000511676 PRTFDC1Q9NRG1 225 aa8.51□□□□□ -1.05
NR1I3-228ENST00000511676 DUSP22Q9NRW4 184 aa8.51□□□□□ -1.05
NR1I3-228ENST00000511676 AGPAT4Q9NRZ5 378 aa8.51□□□□□ -1.05
NR1I3-228ENST00000511676 LANCL2Q9NS86 450 aa8.51□□□□□ -1.05
NR1I3-228ENST00000511676 EXD2Q9NVH0 621 aa8.51□□□□□ -1.05
NR1I3-228ENST00000511676 NKX1-2Q9UD57 310 aaPredicted RBP8.51□□□□□ -1.05
NR1I3-228ENST00000511676 ZNF639Q9UID6 485 aa8.51□□□□□ -1.05
NR1I3-228ENST00000511676 NXT1Q9UKK6 140 aaKnown RBP8.51□□□□□ -1.05
NR1I3-228ENST00000511676 IGKV3D-11A0A0A0MRZ8 115 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 A0A0G2JPF8 293 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 ZNF860A6NHJ4 632 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 HNRNPCL2B2RXH8 293 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 HNRNPCL3B7ZW38 293 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 UPK1AO00322 258 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 HMGN4O00479 90 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 DYRK3O43781 588 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 CPNE3O75131 537 aaKnown RBP8.5□□□□□ -1.05
NR1I3-228ENST00000511676 PRKRAO75569 313 aaKnown RBP8.5□□□□□ -1.05
NR1I3-228ENST00000511676 MED26O95402 600 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 ALBP02768 609 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 HMGN2P05204 90 aaKnown RBP8.5□□□□□ -1.05
NR1I3-228ENST00000511676 TFPTP0C1Z6 253 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 HNRNPCL4P0DMR1 293 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 ETS2P15036 469 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 EFNA1P20827 205 aaPredicted RBP8.5□□□□□ -1.05
NR1I3-228ENST00000511676 MSX2P35548 267 aaPredicted RBP8.5□□□□□ -1.05
NR1I3-228ENST00000511676 MC3RP41968 323 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 XCR1P46094 333 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 HSPA13P48723 471 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 MAN2A2P49641 1150 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 CRISP3P54108 245 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 MC2RQ01718 297 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 STX4Q12846 297 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 KCNAB1Q14722 419 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 ATP6AP1Q15904 470 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 CMPK2Q5EBM0 449 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 COX20Q5RI15 118 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 SNAP47Q5SQN1 464 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 ATAD3BQ5T9A4 648 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 OGFRL1Q5TC84 451 aaPredicted RBP8.5□□□□□ -1.05
NR1I3-228ENST00000511676 ANGPTL8Q6UXH0 198 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 PIWIL3Q7Z3Z3 882 aaKnown RBP8.5□□□□□ -1.05
NR1I3-228ENST00000511676 DTX1Q86Y01 620 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 ARMC8Q8IUR7 673 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 ZC3H7AQ8IWR0 971 aaKnown RBP8.5□□□□□ -1.05
NR1I3-228ENST00000511676 GALNT12Q8IXK2 581 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 C10orf111Q8N326 155 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 VWA5B2Q8N398 1253 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 HORMAD2Q8N7B1 307 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 BMPERQ8N8U9 685 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 ANKFN1Q8N957 763 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 TMEM102Q8N9M5 508 aaPredicted RBP8.5□□□□□ -1.05
NR1I3-228ENST00000511676 CDRT4Q8N9R6 151 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 OR7G1Q8NGA0 311 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 OR5T3Q8NGG3 340 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 OR9A2Q8NGT5 310 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 OR51Q1Q8NH59 317 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 OR5AK3PQ8NH89 298 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 SLCO4A1Q96BD0 722 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 CENPNQ96H22 339 aaPredicted RBP8.5□□□□□ -1.05
NR1I3-228ENST00000511676 RBM18Q96H35 190 aaKnown RBP8.5□□□□□ -1.05
NR1I3-228ENST00000511676 PYURFQ96I23 114 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 TRNT1Q96Q11 434 aaKnown RBP8.5□□□□□ -1.05
NR1I3-228ENST00000511676 BDH2Q9BUT1 245 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 TRIM45Q9H8W5 580 aaPredicted RBP8.5□□□□□ -1.05
NR1I3-228ENST00000511676 CXorf21Q9HAI6 301 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 MAT2BQ9NZL9 334 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 HCN3Q9P1Z3 774 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 KCND3Q9UK17 655 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 PADI2Q9Y2J8 665 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 DSPPQ9NZW4 1301 aa8.5□□□□□ -1.05
NR1I3-228ENST00000511676 KALRNO60229 2985 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 ASH1LQ9NR48 2969 aaKnown RBP8.49□□□□□ -1.05
NR1I3-228ENST00000511676 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 C5orf58C9J3I9 102 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 OR10H2O60403 315 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 PRAMEF2O60811 474 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 B4GALT2O60909 372 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 SERPINB7O75635 380 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 SCRG1O75711 98 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 SERPINA1P01009 418 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 LDLRP01130 860 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 SEMG1P04279 462 aa8.49□□□□□ -1.05
NR1I3-228ENST00000511676 CTSBP07858 339 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms