RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 GAPDHSO14556 408 aaPredicted RBP14.07□□□□□ -0.16
USP38-202ENST00000510377 PRODHO43272 600 aa14.07□□□□□ -0.16
USP38-202ENST00000510377 LAG3P18627 525 aa14.07□□□□□ -0.16
USP38-202ENST00000510377 DNASE1P24855 282 aa14.07□□□□□ -0.16
USP38-202ENST00000510377 AHRP35869 848 aa14.07□□□□□ -0.16
USP38-202ENST00000510377 DDOSTP39656 456 aa14.07□□□□□ -0.16
USP38-202ENST00000510377 BTN3A2P78410 334 aa14.07□□□□□ -0.16
USP38-202ENST00000510377 FAPQ12884 760 aa14.07□□□□□ -0.16
USP38-202ENST00000510377 BBS10Q8TAM1 723 aa14.07□□□□□ -0.16
USP38-202ENST00000510377 SAMD8Q96LT4 415 aa14.07□□□□□ -0.16
USP38-202ENST00000510377 CCDC3Q9BQI4 270 aa14.07□□□□□ -0.16
USP38-202ENST00000510377 CDCA4Q9BXL8 241 aa14.07□□□□□ -0.16
USP38-202ENST00000510377 MYNNQ9NPC7 610 aa14.07□□□□□ -0.16
USP38-202ENST00000510377 NFKBIL1Q9UBC1 381 aaPredicted RBP14.07□□□□□ -0.16
USP38-202ENST00000510377 STOML2Q9UJZ1 356 aa14.07□□□□□ -0.16
USP38-202ENST00000510377 ZAR1LA6NP61 321 aa14.07□□□□□ -0.16
USP38-202ENST00000510377 WASHC1A8K0Z3 465 aa14.07□□□□□ -0.16
USP38-202ENST00000510377 B4DXG7 233 aa14.07□□□□□ -0.16
USP38-202ENST00000510377 EFCAB14O75071 495 aa14.07□□□□□ -0.16
USP38-202ENST00000510377 HMGN2P05204 90 aaKnown RBP14.07□□□□□ -0.16
USP38-202ENST00000510377 HPGDP15428 266 aa14.07□□□□□ -0.16
USP38-202ENST00000510377 WDR45BQ5MNZ6 344 aa14.07□□□□□ -0.16
USP38-202ENST00000510377 ACSM5Q6NUN0 579 aa14.07□□□□□ -0.16
USP38-202ENST00000510377 WASH2PQ6VEQ5 465 aa14.07□□□□□ -0.16
USP38-202ENST00000510377 FRRS1Q6ZNA5 592 aa14.07□□□□□ -0.16
USP38-202ENST00000510377 TM9SF4Q92544 642 aa14.07□□□□□ -0.16
USP38-202ENST00000510377 MVB12BQ9H7P6 319 aa14.07□□□□□ -0.16
USP38-202ENST00000510377 ZNF860A6NHJ4 632 aa14.06□□□□□ -0.16
USP38-202ENST00000510377 C1QTNF3-AMACRE9PGA6 284 aa14.06□□□□□ -0.16
USP38-202ENST00000510377 ICMTO60725 284 aa14.06□□□□□ -0.16
USP38-202ENST00000510377 CSF3P09919 207 aa14.06□□□□□ -0.16
USP38-202ENST00000510377 ACADMP11310 421 aa14.06□□□□□ -0.16
USP38-202ENST00000510377 ANXA3P12429 323 aa14.06□□□□□ -0.16
USP38-202ENST00000510377 BMPR1AP36894 532 aa14.06□□□□□ -0.16
USP38-202ENST00000510377 GZMMP51124 257 aa14.06□□□□□ -0.16
USP38-202ENST00000510377 LGALS3BPQ08380 585 aa14.06□□□□□ -0.16
USP38-202ENST00000510377 ILKQ13418 452 aa14.06□□□□□ -0.16
USP38-202ENST00000510377 SEC23BQ15437 767 aa14.06□□□□□ -0.16
USP38-202ENST00000510377 PIP5KL1Q5T9C9 394 aa14.06□□□□□ -0.16
USP38-202ENST00000510377 SIMC1Q8NDZ2 872 aa14.06□□□□□ -0.16
USP38-202ENST00000510377 ZNF582Q96NG8 517 aaPredicted RBP14.06□□□□□ -0.16
USP38-202ENST00000510377 NDC1Q9BTX1 674 aa14.06□□□□□ -0.16
USP38-202ENST00000510377 NANSQ9NR45 359 aa14.06□□□□□ -0.16
USP38-202ENST00000510377 WDR45Q9Y484 360 aa14.06□□□□□ -0.16
USP38-202ENST00000510377 MAU2Q9Y6X3 613 aa14.06□□□□□ -0.16
USP38-202ENST00000510377 CKAP5Q14008 2032 aa14.06□□□□□ -0.16
USP38-202ENST00000510377 CCDC88CQ9P219 2028 aa14.06□□□□□ -0.16
USP38-202ENST00000510377 TRBV5-4A0A0C4DH59 114 aa14.06□□□□□ -0.16
USP38-202ENST00000510377 GFYI3L273 518 aa14.06□□□□□ -0.16
USP38-202ENST00000510377 NPPBP16860 134 aa14.06□□□□□ -0.16
USP38-202ENST00000510377 DDCP20711 480 aa14.06□□□□□ -0.16
USP38-202ENST00000510377 RPS5P46782 204 aaKnown RBP14.06□□□□□ -0.16
USP38-202ENST00000510377 TAP2Q03519 686 aa14.06□□□□□ -0.16
USP38-202ENST00000510377 MRPL58Q14197 206 aaKnown RBP14.06□□□□□ -0.16
USP38-202ENST00000510377 TOR1AIP1Q5JTV8 583 aa14.06□□□□□ -0.16
USP38-202ENST00000510377 ACBD7Q8N6N7 88 aa14.06□□□□□ -0.16
USP38-202ENST00000510377 ZNF655Q8N720 491 aaPredicted RBP14.06□□□□□ -0.16
USP38-202ENST00000510377 WDR20Q8TBZ3 569 aa14.06□□□□□ -0.16
USP38-202ENST00000510377 OSTF1Q92882 214 aa14.06□□□□□ -0.16
USP38-202ENST00000510377 SAMD11Q96NU1 681 aa14.06□□□□□ -0.16
USP38-202ENST00000510377 C1GALT1Q9NS00 363 aa14.06□□□□□ -0.16
USP38-202ENST00000510377 TEX10Q9NXF1 929 aaPredicted RBP14.06□□□□□ -0.16
USP38-202ENST00000510377 CCL26Q9Y258 94 aa14.06□□□□□ -0.16
USP38-202ENST00000510377 SLC9A3R1O14745 358 aaPredicted RBP14.06□□□□□ -0.16
USP38-202ENST00000510377 TIMP2P16035 220 aa14.06□□□□□ -0.16
USP38-202ENST00000510377 MMP11P24347 488 aa14.06□□□□□ -0.16
USP38-202ENST00000510377 STAT5AP42229 794 aa14.06□□□□□ -0.16
USP38-202ENST00000510377 TSPAN5P62079 268 aa14.06□□□□□ -0.16
USP38-202ENST00000510377 NTHL1P78549 312 aa14.06□□□□□ -0.16
USP38-202ENST00000510377 PGBD2Q6P3X8 592 aa14.06□□□□□ -0.16
USP38-202ENST00000510377 OR6T1Q8NGN1 323 aa14.06□□□□□ -0.16
USP38-202ENST00000510377 ZNF514Q96K75 400 aaPredicted RBP14.06□□□□□ -0.16
USP38-202ENST00000510377 MKRN2Q9H000 416 aaKnown RBP14.06□□□□□ -0.16
USP38-202ENST00000510377 SLITRK2Q9H156 845 aa14.06□□□□□ -0.16
USP38-202ENST00000510377 MED20Q9H944 212 aa14.06□□□□□ -0.16
USP38-202ENST00000510377 C12orf4Q9NQ89 552 aa14.06□□□□□ -0.16
USP38-202ENST00000510377 MARK1Q9P0L2 795 aa14.06□□□□□ -0.16
USP38-202ENST00000510377 KLHL42Q9P2K6 505 aa14.06□□□□□ -0.16
USP38-202ENST00000510377 IKZF2Q9UKS7 526 aa14.06□□□□□ -0.16
USP38-202ENST00000510377 PIKFYVEQ9Y2I7 2098 aa14.06□□□□□ -0.16
USP38-202ENST00000510377 UBE2QL1A1L167 161 aa14.05□□□□□ -0.16
USP38-202ENST00000510377 RPP14O95059 124 aaKnown RBP14.05□□□□□ -0.16
USP38-202ENST00000510377 NAA10P41227 235 aaPredicted RBP14.05□□□□□ -0.16
USP38-202ENST00000510377 IRF5Q13568 498 aa14.05□□□□□ -0.16
USP38-202ENST00000510377 ODF4Q2M2E3 257 aa14.05□□□□□ -0.16
USP38-202ENST00000510377 SAXO2Q658L1 398 aa14.05□□□□□ -0.16
USP38-202ENST00000510377 SLC9B2Q86UD5 537 aa14.05□□□□□ -0.16
USP38-202ENST00000510377 RANBP3LQ86VV4 465 aaPredicted RBP14.05□□□□□ -0.16
USP38-202ENST00000510377 OR2T33Q8NG76 320 aa14.05□□□□□ -0.16
USP38-202ENST00000510377 OR2A12Q8NGT7 310 aa14.05□□□□□ -0.16
USP38-202ENST00000510377 HYLS1Q96M11 299 aa14.05□□□□□ -0.16
USP38-202ENST00000510377 SLC46A2Q9BY10 475 aa14.05□□□□□ -0.16
USP38-202ENST00000510377 SRRQ9GZT4 340 aa14.05□□□□□ -0.16
USP38-202ENST00000510377 SPHK2Q9NRA0 654 aa14.05□□□□□ -0.16
USP38-202ENST00000510377 TEX13CA0A0J9YWL9 993 aa14.05□□□□□ -0.16
USP38-202ENST00000510377 OR10H2O60403 315 aa14.05□□□□□ -0.16
USP38-202ENST00000510377 ZNF750Q32MQ0 723 aa14.05□□□□□ -0.16
USP38-202ENST00000510377 SLX4IPQ5VYV7 408 aa14.05□□□□□ -0.16
USP38-202ENST00000510377 SLC25A25Q6KCM7 469 aa14.05□□□□□ -0.16
USP38-202ENST00000510377 C1orf216Q8TAB5 229 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms