RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 MPIP34949 423 aa12.45□□□□□ -0.42
SNF8-206ENST00000509989 FRKP42685 505 aaPredicted RBP12.45□□□□□ -0.42
SNF8-206ENST00000509989 PPICP45877 212 aa12.45□□□□□ -0.42
SNF8-206ENST00000509989 PSG6Q00889 435 aa12.45□□□□□ -0.42
SNF8-206ENST00000509989 PLGLB1Q02325 96 aa12.45□□□□□ -0.42
SNF8-206ENST00000509989 C6orf163Q5TEZ5 329 aa12.45□□□□□ -0.42
SNF8-206ENST00000509989 RIMKLAQ8IXN7 391 aa12.45□□□□□ -0.42
SNF8-206ENST00000509989 FBXW8Q8N3Y1 598 aa12.45□□□□□ -0.42
SNF8-206ENST00000509989 FNDC5Q8NAU1 212 aa12.45□□□□□ -0.42
SNF8-206ENST00000509989 FAM98AQ8NCA5 519 aaKnown RBP12.45□□□□□ -0.42
SNF8-206ENST00000509989 FBXO30Q8TB52 745 aa12.45□□□□□ -0.42
SNF8-206ENST00000509989 SPPL2AQ8TCT8 520 aa12.45□□□□□ -0.42
SNF8-206ENST00000509989 TMBIM1Q969X1 311 aa12.45□□□□□ -0.42
SNF8-206ENST00000509989 PPCDCQ96CD2 204 aa12.45□□□□□ -0.42
SNF8-206ENST00000509989 ELP4Q96EB1 424 aa12.45□□□□□ -0.42
SNF8-206ENST00000509989 METTL2AQ96IZ6 378 aaKnown RBP12.45□□□□□ -0.42
SNF8-206ENST00000509989 SGCZQ96LD1 299 aa12.45□□□□□ -0.42
SNF8-206ENST00000509989 PPP3R2Q96LZ3 170 aa12.45□□□□□ -0.42
SNF8-206ENST00000509989 PSMG3-AS1Q96PY0 264 aa12.45□□□□□ -0.42
SNF8-206ENST00000509989 FAM173AQ9BQD7 235 aa12.45□□□□□ -0.42
SNF8-206ENST00000509989 WDR55Q9H6Y2 383 aaPredicted RBP12.45□□□□□ -0.42
SNF8-206ENST00000509989 GALNT9Q9HCQ5 603 aa12.45□□□□□ -0.42
SNF8-206ENST00000509989 SIRT3Q9NTG7 399 aaPredicted RBP12.45□□□□□ -0.42
SNF8-206ENST00000509989 GIMAP4Q9NUV9 329 aa12.45□□□□□ -0.42
SNF8-206ENST00000509989 ATP6V1HQ9UI12 483 aa12.45□□□□□ -0.42
SNF8-206ENST00000509989 ZNF835Q9Y2P0 537 aa12.45□□□□□ -0.42
SNF8-206ENST00000509989 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.45□□□□□ -0.42
SNF8-206ENST00000509989 PHF3Q92576 2039 aaKnown RBP12.44□□□□□ -0.42
SNF8-206ENST00000509989 ARHGAP21Q5T5U3 1957 aa12.44□□□□□ -0.42
SNF8-206ENST00000509989 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.44□□□□□ -0.42
SNF8-206ENST00000509989 GOLGA8QA0A0J9YX86 632 aa12.44□□□□□ -0.42
SNF8-206ENST00000509989 GXYLT2A0PJZ3 443 aa12.44□□□□□ -0.42
SNF8-206ENST00000509989 GOLGA8OA6NCC3 632 aa12.44□□□□□ -0.42
SNF8-206ENST00000509989 WIPF3A6NGB9 483 aa12.44□□□□□ -0.42
SNF8-206ENST00000509989 C9JVG2 144 aa12.44□□□□□ -0.42
SNF8-206ENST00000509989 GOLGA8NF8WBI6 632 aa12.44□□□□□ -0.42
SNF8-206ENST00000509989 SDHDO14521 159 aa12.44□□□□□ -0.42
SNF8-206ENST00000509989 ADAM10O14672 748 aa12.44□□□□□ -0.42
SNF8-206ENST00000509989 TSPAN2O60636 221 aa12.44□□□□□ -0.42
SNF8-206ENST00000509989 SLC19A2O60779 497 aa12.44□□□□□ -0.42
SNF8-206ENST00000509989 TBX19O60806 448 aa12.44□□□□□ -0.42
SNF8-206ENST00000509989 ZG16O60844 167 aa12.44□□□□□ -0.42
SNF8-206ENST00000509989 ERN1O75460 977 aaKnown RBP12.44□□□□□ -0.42
SNF8-206ENST00000509989 PPM1BO75688 479 aa12.44□□□□□ -0.42
SNF8-206ENST00000509989 CLDN1O95832 211 aa12.44□□□□□ -0.42
SNF8-206ENST00000509989 ALDOCP09972 364 aaKnown RBP12.44□□□□□ -0.42
SNF8-206ENST00000509989 DRD5P21918 477 aa12.44□□□□□ -0.42
SNF8-206ENST00000509989 GRK2P25098 689 aa12.44□□□□□ -0.42
SNF8-206ENST00000509989 COL8A1P27658 744 aa12.44□□□□□ -0.42
SNF8-206ENST00000509989 CASP3P42574 277 aa12.44□□□□□ -0.42
SNF8-206ENST00000509989 GSTM5P46439 218 aa12.44□□□□□ -0.42
SNF8-206ENST00000509989 OCRLQ01968 901 aa12.44□□□□□ -0.42
SNF8-206ENST00000509989 RPS6KA2Q15349 733 aa12.44□□□□□ -0.42
SNF8-206ENST00000509989 CDSNQ15517 529 aa12.44□□□□□ -0.42
SNF8-206ENST00000509989 ATP6AP1LQ52LC2 224 aa12.44□□□□□ -0.42
SNF8-206ENST00000509989 C4orf17Q53FE4 359 aa12.44□□□□□ -0.42
SNF8-206ENST00000509989 EMC4Q5J8M3 183 aa12.44□□□□□ -0.42
SNF8-206ENST00000509989 GALNT10Q86SR1 603 aa12.44□□□□□ -0.42
SNF8-206ENST00000509989 SPPL2CQ8IUH8 684 aa12.44□□□□□ -0.42
SNF8-206ENST00000509989 TAGAPQ8N103 731 aa12.44□□□□□ -0.42
SNF8-206ENST00000509989 OR2L13Q8N349 312 aa12.44□□□□□ -0.42
SNF8-206ENST00000509989 RPRMLQ8N4K4 120 aa12.44□□□□□ -0.42
SNF8-206ENST00000509989 SSC4DQ8WTU2 575 aa12.44□□□□□ -0.42
SNF8-206ENST00000509989 DIO2Q92813 273 aa12.44□□□□□ -0.42
SNF8-206ENST00000509989 EFHD2Q96C19 240 aaPredicted RBP12.44□□□□□ -0.42
SNF8-206ENST00000509989 GIMAP5Q96F15 307 aa12.44□□□□□ -0.42
SNF8-206ENST00000509989 C16orf58Q96GQ5 468 aa12.44□□□□□ -0.42
SNF8-206ENST00000509989 ATP6V1G3Q96LB4 118 aa12.44□□□□□ -0.42
SNF8-206ENST00000509989 JSRP1Q96MG2 331 aaPredicted RBP12.44□□□□□ -0.42
SNF8-206ENST00000509989 BTBD9Q96Q07 612 aa12.44□□□□□ -0.42
SNF8-206ENST00000509989 SH3GL2Q99962 352 aa12.44□□□□□ -0.42
SNF8-206ENST00000509989 RTN4RQ9BZR6 473 aa12.44□□□□□ -0.42
SNF8-206ENST00000509989 PLSCR2Q9NRY7 297 aa12.44□□□□□ -0.42
SNF8-206ENST00000509989 ZNF446Q9NWS9 450 aa12.44□□□□□ -0.42
SNF8-206ENST00000509989 C19orf53Q9UNZ5 99 aaPredicted RBP12.44□□□□□ -0.42
SNF8-206ENST00000509989 SLC5A6Q9Y289 635 aa12.44□□□□□ -0.42
SNF8-206ENST00000509989 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.44□□□□□ -0.42
SNF8-206ENST00000509989 TMED5Q9Y3A6 229 aa12.44□□□□□ -0.42
SNF8-206ENST00000509989 FRG2CA6NGY1 282 aa12.43□□□□□ -0.42
SNF8-206ENST00000509989 PLOD2O00469 737 aa12.43□□□□□ -0.42
SNF8-206ENST00000509989 ZNF195O14628 629 aa12.43□□□□□ -0.42
SNF8-206ENST00000509989 GNB5O14775 395 aa12.43□□□□□ -0.42
SNF8-206ENST00000509989 TRIM3O75382 744 aaPredicted RBP12.43□□□□□ -0.42
SNF8-206ENST00000509989 IGKV1D-16P01601 117 aa12.43□□□□□ -0.42
SNF8-206ENST00000509989 ENDOUP21128 410 aaKnown RBP12.43□□□□□ -0.42
SNF8-206ENST00000509989 NTSP30990 170 aa12.43□□□□□ -0.42
SNF8-206ENST00000509989 SLC18A1P54219 525 aa12.43□□□□□ -0.42
SNF8-206ENST00000509989 PHC1P78364 1004 aa12.43□□□□□ -0.42
SNF8-206ENST00000509989 PLCXD2Q0VAA5 305 aa12.43□□□□□ -0.42
SNF8-206ENST00000509989 ZNF155Q12901 538 aaPredicted RBP12.43□□□□□ -0.42
SNF8-206ENST00000509989 GAB1Q13480 694 aa12.43□□□□□ -0.42
SNF8-206ENST00000509989 LARP4Q71RC2 724 aaKnown RBP eCLIP12.43□□□□□ -0.424e-7■■□□□ 13.6
SNF8-206ENST00000509989 WDR75Q8IWA0 830 aaKnown RBP12.43□□□□□ -0.42
SNF8-206ENST00000509989 SLC44A2Q8IWA5 706 aaPredicted RBP12.43□□□□□ -0.42
SNF8-206ENST00000509989 SLC34A3Q8N130 599 aa12.43□□□□□ -0.42
SNF8-206ENST00000509989 CLEC4FQ8N1N0 589 aa12.43□□□□□ -0.42
SNF8-206ENST00000509989 C17orf47Q8NEP4 570 aa12.43□□□□□ -0.42
SNF8-206ENST00000509989 PIK3R3Q92569 461 aa12.43□□□□□ -0.42
SNF8-206ENST00000509989 TEX37Q96LM6 180 aa12.43□□□□□ -0.42
SNF8-206ENST00000509989 RILPQ96NA2 401 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms