RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 TO15178 435 aa17.09■□□□□ 0.33
UBE3D-207ENST00000509102 SPAG7O75391 227 aa17.09■□□□□ 0.33
UBE3D-207ENST00000509102 ERN1O75460 977 aaKnown RBP17.09■□□□□ 0.33
UBE3D-207ENST00000509102 REM1O75628 298 aa17.09■□□□□ 0.33
UBE3D-207ENST00000509102 DDX5P17844 614 aaKnown RBP17.09■□□□□ 0.33
UBE3D-207ENST00000509102 PRPH2P23942 346 aa17.09■□□□□ 0.33
UBE3D-207ENST00000509102 IL12BP29460 328 aa17.09■□□□□ 0.33
UBE3D-207ENST00000509102 MRPS22P82650 360 aaKnown RBP17.09■□□□□ 0.33
UBE3D-207ENST00000509102 PMPCAQ10713 525 aa17.09■□□□□ 0.33
UBE3D-207ENST00000509102 DUSP8Q13202 625 aa17.09■□□□□ 0.33
UBE3D-207ENST00000509102 SF3B4Q15427 424 aaKnown RBP eCLIP17.09■□□□□ 0.33
UBE3D-207ENST00000509102 EMC4Q5J8M3 183 aa17.09■□□□□ 0.33
UBE3D-207ENST00000509102 BICRALQ6AI39 1079 aa17.09■□□□□ 0.33
UBE3D-207ENST00000509102 FAM71E1Q6IPT2 247 aa17.09■□□□□ 0.33
UBE3D-207ENST00000509102 TMEM81Q6P7N7 255 aa17.09■□□□□ 0.33
UBE3D-207ENST00000509102 RNF165Q6ZSG1 346 aa17.09■□□□□ 0.33
UBE3D-207ENST00000509102 DDIASQ8IXT1 998 aa17.09■□□□□ 0.33
UBE3D-207ENST00000509102 OR10Q1Q8NGQ4 319 aa17.09■□□□□ 0.33
UBE3D-207ENST00000509102 OR1J4Q8NGS1 313 aa17.09■□□□□ 0.33
UBE3D-207ENST00000509102 COL21A1Q96P44 957 aa17.09■□□□□ 0.33
UBE3D-207ENST00000509102 BTBD9Q96Q07 612 aa17.09■□□□□ 0.33
UBE3D-207ENST00000509102 OSBPL11Q9BXB4 747 aa17.09■□□□□ 0.33
UBE3D-207ENST00000509102 TAS2R7Q9NYW3 318 aa17.09■□□□□ 0.33
UBE3D-207ENST00000509102 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.09■□□□□ 0.33
UBE3D-207ENST00000509102 GPR55Q9Y2T6 319 aaPredicted RBP17.09■□□□□ 0.33
UBE3D-207ENST00000509102 C15orf41Q9Y2V0 281 aa17.09■□□□□ 0.33
UBE3D-207ENST00000509102 TMED5Q9Y3A6 229 aa17.09■□□□□ 0.33
UBE3D-207ENST00000509102 OR10H1Q9Y4A9 318 aa17.09■□□□□ 0.33
UBE3D-207ENST00000509102 PCDHGB3Q9Y5G1 929 aa17.09■□□□□ 0.33
UBE3D-207ENST00000509102 V9GYY5 206 aaPredicted RBP17.09■□□□□ 0.33
UBE3D-207ENST00000509102 DNAJC13O75165 2243 aa17.08■□□□□ 0.33
UBE3D-207ENST00000509102 OR6C70A6NIJ9 312 aa17.08■□□□□ 0.32
UBE3D-207ENST00000509102 MYO1GB0I1T2 1018 aa17.08■□□□□ 0.32
UBE3D-207ENST00000509102 JUNP05412 331 aaKnown RBP17.08■□□□□ 0.32
UBE3D-207ENST00000509102 ALDH3A1P30838 453 aa17.08■□□□□ 0.32
UBE3D-207ENST00000509102 SERPINB5P36952 375 aa17.08■□□□□ 0.32
UBE3D-207ENST00000509102 TRPC1P48995 793 aa17.08■□□□□ 0.32
UBE3D-207ENST00000509102 ZNF155Q12901 538 aaPredicted RBP17.08■□□□□ 0.32
UBE3D-207ENST00000509102 EFR3AQ14156 821 aa17.08■□□□□ 0.32
UBE3D-207ENST00000509102 ZNHIT3Q15649 155 aaPredicted RBP17.08■□□□□ 0.32
UBE3D-207ENST00000509102 GDF7Q7Z4P5 450 aa17.08■□□□□ 0.32
UBE3D-207ENST00000509102 MCEMP1Q8IX19 187 aa17.08■□□□□ 0.32
UBE3D-207ENST00000509102 CLYBLQ8N0X4 340 aa17.08■□□□□ 0.32
UBE3D-207ENST00000509102 TCP10LQ8TDR4 215 aa17.08■□□□□ 0.32
UBE3D-207ENST00000509102 CCT7Q99832 543 aa17.08■□□□□ 0.32
UBE3D-207ENST00000509102 SLC6A15Q9H2J7 730 aa17.08■□□□□ 0.32
UBE3D-207ENST00000509102 TNFRSF12AQ9NP84 129 aa17.08■□□□□ 0.32
UBE3D-207ENST00000509102 DDX18Q9NVP1 670 aaKnown RBP17.08■□□□□ 0.32
UBE3D-207ENST00000509102 TNFRSF10DQ9UBN6 386 aa17.08■□□□□ 0.32
UBE3D-207ENST00000509102 RNF6Q9Y252 685 aa17.08■□□□□ 0.32
UBE3D-207ENST00000509102 HRH3Q9Y5N1 445 aa17.08■□□□□ 0.32
UBE3D-207ENST00000509102 ITPR2Q14571 2701 aa17.08■□□□□ 0.32
UBE3D-207ENST00000509102 A0A087WV62 115 aa17.07■□□□□ 0.32
UBE3D-207ENST00000509102 PRAMEF25A6NGN4 478 aa17.07■□□□□ 0.32
UBE3D-207ENST00000509102 NPIPB8E9PQR5 432 aa17.07■□□□□ 0.32
UBE3D-207ENST00000509102 GNB5O14775 395 aa17.07■□□□□ 0.32
UBE3D-207ENST00000509102 HPNP05981 417 aa17.07■□□□□ 0.32
UBE3D-207ENST00000509102 TUBBP07437 444 aa17.07■□□□□ 0.32
UBE3D-207ENST00000509102 SNRPB2P08579 225 aaKnown RBP17.07■□□□□ 0.32
UBE3D-207ENST00000509102 CDK9P50750 372 aaKnown RBP17.07■□□□□ 0.32
UBE3D-207ENST00000509102 NUP107P57740 925 aa17.07■□□□□ 0.32
UBE3D-207ENST00000509102 KRT71Q3SY84 523 aa17.07■□□□□ 0.32
UBE3D-207ENST00000509102 C1orf185Q5T7R7 199 aa17.07■□□□□ 0.32
UBE3D-207ENST00000509102 KANK2Q63ZY3 851 aa17.07■□□□□ 0.32
UBE3D-207ENST00000509102 TIGD3Q6B0B8 471 aa17.07■□□□□ 0.32
UBE3D-207ENST00000509102 ANGPTL8Q6UXH0 198 aa17.07■□□□□ 0.32
UBE3D-207ENST00000509102 PM20D2Q8IYS1 436 aa17.07■□□□□ 0.32
UBE3D-207ENST00000509102 MARVELD2Q8N4S9 558 aa17.07■□□□□ 0.32
UBE3D-207ENST00000509102 MREGQ8N565 214 aa17.07■□□□□ 0.32
UBE3D-207ENST00000509102 SIMC1Q8NDZ2 872 aa17.07■□□□□ 0.32
UBE3D-207ENST00000509102 OR7G2Q8NG99 324 aa17.07■□□□□ 0.32
UBE3D-207ENST00000509102 ZFP28Q8NHY6 868 aa17.07■□□□□ 0.32
UBE3D-207ENST00000509102 PPP1R14CQ8TAE6 165 aa17.07■□□□□ 0.32
UBE3D-207ENST00000509102 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.07■□□□□ 0.32
UBE3D-207ENST00000509102 HGDQ93099 445 aa17.07■□□□□ 0.32
UBE3D-207ENST00000509102 TMBIM1Q969X1 311 aa17.07■□□□□ 0.32
UBE3D-207ENST00000509102 VSTM2LQ96N03 204 aa17.07■□□□□ 0.32
UBE3D-207ENST00000509102 GNRHR2Q96P88 292 aa17.07■□□□□ 0.32
UBE3D-207ENST00000509102 TTYH2Q9BSA4 534 aa17.07■□□□□ 0.32
UBE3D-207ENST00000509102 TMEM109Q9BVC6 243 aa17.07■□□□□ 0.32
UBE3D-207ENST00000509102 FOLH1BQ9HBA9 442 aa17.07■□□□□ 0.32
UBE3D-207ENST00000509102 KCNJ16Q9NPI9 418 aa17.07■□□□□ 0.32
UBE3D-207ENST00000509102 SLC17A7Q9P2U7 560 aa17.07■□□□□ 0.32
UBE3D-207ENST00000509102 SPRR3Q9UBC9 169 aa17.07■□□□□ 0.32
UBE3D-207ENST00000509102 MRTO4Q9UKD2 239 aaKnown RBP17.07■□□□□ 0.32
UBE3D-207ENST00000509102 TRAF6Q9Y4K3 522 aa17.07■□□□□ 0.32
UBE3D-207ENST00000509102 CACNA1DQ01668 2161 aa17.06■□□□□ 0.32
UBE3D-207ENST00000509102 NBPF19A0A087WUL8 3843 aa17.06■□□□□ 0.32
UBE3D-207ENST00000509102 TMEM114B3SHH9 223 aa17.06■□□□□ 0.32
UBE3D-207ENST00000509102 RGS16O15492 202 aaPredicted RBP17.06■□□□□ 0.32
UBE3D-207ENST00000509102 ICOSLGO75144 302 aa17.06■□□□□ 0.32
UBE3D-207ENST00000509102 UGT2B11O75310 529 aa17.06■□□□□ 0.32
UBE3D-207ENST00000509102 FGF4P08620 206 aa17.06■□□□□ 0.32
UBE3D-207ENST00000509102 LINC00032P0C843 101 aa17.06■□□□□ 0.32
UBE3D-207ENST00000509102 MAPK1P28482 360 aa17.06■□□□□ 0.32
UBE3D-207ENST00000509102 GPC1P35052 558 aa17.06■□□□□ 0.32
UBE3D-207ENST00000509102 MC3RP41968 323 aa17.06■□□□□ 0.32
UBE3D-207ENST00000509102 ASMTP46597 345 aa17.06■□□□□ 0.32
UBE3D-207ENST00000509102 RPL38P63173 70 aaKnown RBP17.06■□□□□ 0.32
UBE3D-207ENST00000509102 ARL13AQ5H913 290 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms